Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20670
(474 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 125 1e-29
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 37 0.009
AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical ... 30 0.98
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 3.0
AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical ... 28 3.9
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 28 3.9
Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81070-12|CAB03008.1| 495|Caenorhabditis elegans Hypothetical p... 27 6.9
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z75544-6|CAA99882.1| 495|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z48717-7|CAA88605.1| 518|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF174643-1|AAD51977.1| 495|Caenorhabditis elegans PP2A-B regula... 27 6.9
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 27 9.1
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 27 9.1
U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical pr... 27 9.1
L12018-10|AAA65466.2| 683|Caenorhabditis elegans Dumpy : shorte... 27 9.1
AY349018-1|AAQ55498.1| 310|Caenorhabditis elegans NHR-91B protein. 27 9.1
AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein. 27 9.1
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 27 9.1
AL132841-5|CAI46629.1| 310|Caenorhabditis elegans Hypothetical ... 27 9.1
AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical ... 27 9.1
AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear recep... 27 9.1
AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear recep... 27 9.1
AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear recep... 27 9.1
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 125 bits (302), Expect = 1e-29
Identities = 58/83 (69%), Positives = 69/83 (83%)
Frame = +1
Query: 10 NVGFVFTRGDLVEGRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIP 189
NVGFVFT+ DL E R KLLEN+ APA+ GAIAP V +P NTG+GPEKTSFFQAL IP
Sbjct: 85 NVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIP 144
Query: 190 TKISKGTIEIINDVHILKPGDKL 258
TKI++GTIEI+NDVH++K GDK+
Sbjct: 145 TKIARGTIEILNDVHLIKEGDKV 167
Score = 107 bits (256), Expect = 5e-24
Identities = 46/74 (62%), Positives = 62/74 (83%)
Frame = +3
Query: 252 QVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAAL 431
+VGASE+ LLNML ++PFSYGLVV+QVYD GT++ PE+LD+ E+LR +F +GV NVA++
Sbjct: 166 KVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASV 225
Query: 432 SLAIGYPTIASAPH 473
SLA+ YPT+AS H
Sbjct: 226 SLAVNYPTLASVAH 239
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 36.7 bits (81), Expect = 0.009
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 IKGNVGFVFTRGDLVEGRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSFFQA 177
+KG G +FT E + E + AR G +A +VV+P + +
Sbjct: 97 LKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRK 156
Query: 178 LSIPTKISKGTIEIINDVHILKPGDKL 258
L +PTK+ KG I + + K G+ L
Sbjct: 157 LGLPTKLDKGVITLYQQFEVCKEGEPL 183
>AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical
protein Y41G9A.6 protein.
Length = 524
Score = 29.9 bits (64), Expect = 0.98
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 11 TLASCSPAETSLKAVTNCWRTKSRLQL-VPVPL-PHCQSSFPPTTPASVQRKPLSSKLFP 184
T+ S P A+ T+S + L + VP P + FPP TP + P ++ L
Sbjct: 451 TVVSSEPNHIDFSAINQLSHTQSPVNLQIRVPQQPLGAAGFPPVTPGLFENNPQNTDLAD 510
Query: 185 SLPKFQRV 208
L F ++
Sbjct: 511 LLQNFLKL 518
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 122 TTDNGAMAPGRAGAWTLFSNSLSRPSTRSPRVNTKPT 12
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical
protein C32F10.4 protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 98 VPLPHCQSSFPPTTPASVQRKPLSSKLFPSLP-KFQRVLLKSST 226
VP P S PP + P+SS+ P +P K Q V +SST
Sbjct: 207 VPTPMSPSGMPPPPRYTAYAPPMSSQTAPPIPTKQQPVDSESST 250
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 61 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 210
+L +Q A A+ L+ +P TGL P + FQAL P I+ T
Sbjct: 42 VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89
>Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical
protein F53C11.8 protein.
Length = 388
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 28 TRGDLVEGRDKLLENKVQAPARPGAIAPLSV 120
T G V G +++ Q PA PG +AP +
Sbjct: 3 TNGHAVNGEAHVMQQVAQQPAPPGPLAPQGI 33
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 83 LQLVPVPLPHCQSSFPPTTPASVQRKPL 166
L + P P S PPT P S RKP+
Sbjct: 377 LSTLATPSPVPSPSVPPTAPPSTPRKPM 404
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +3
Query: 258 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSL 437
G S+ +L L+ +G V ++ D G++ A + + + R AG A SL
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 629
Query: 438 A 440
A
Sbjct: 630 A 630
>Z81070-12|CAB03008.1| 495|Caenorhabditis elegans Hypothetical
protein F26E4.1 protein.
Length = 495
Score = 27.1 bits (57), Expect = 6.9
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = -2
Query: 407 SLELGTEILWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLSPGFKMCT 228
SLE+ +I ++ + KN++ I N+KTI W+ + K G + NL ++ T
Sbjct: 128 SLEIDEKIN--QIRWLKKKNAANFILSTNDKTIKLWKISERERKIGDDAWNLPRTNRINT 185
Query: 227 S-----LMI-SIVPFEILV 189
S L I SIVP E++V
Sbjct: 186 SSFRGRLQIPSIVPMELIV 204
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +3
Query: 258 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSL 437
G S+ +L L+ +G V ++ D G++ A + + + R AG A SL
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 629
Query: 438 A 440
A
Sbjct: 630 A 630
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +3
Query: 258 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSL 437
G S+ +L L+ +G V ++ D G++ A + + + R AG A SL
Sbjct: 504 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 563
Query: 438 A 440
A
Sbjct: 564 A 564
>Z75544-6|CAA99882.1| 495|Caenorhabditis elegans Hypothetical
protein F26E4.1 protein.
Length = 495
Score = 27.1 bits (57), Expect = 6.9
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = -2
Query: 407 SLELGTEILWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLSPGFKMCT 228
SLE+ +I ++ + KN++ I N+KTI W+ + K G + NL ++ T
Sbjct: 128 SLEIDEKIN--QIRWLKKKNAANFILSTNDKTIKLWKISERERKIGDDAWNLPRTNRINT 185
Query: 227 S-----LMI-SIVPFEILV 189
S L I SIVP E++V
Sbjct: 186 SSFRGRLQIPSIVPMELIV 204
>Z48717-7|CAA88605.1| 518|Caenorhabditis elegans Hypothetical
protein T10B9.3 protein.
Length = 518
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -2
Query: 461 SNSWVSNSQRKSSYISNSSLELGTEILWFDVQNFR 357
S S+ +NS RK + NS E GTEILW Q R
Sbjct: 131 SPSFSNNSLRK---VRNSVQECGTEILWNIEQKVR 162
>AF174643-1|AAD51977.1| 495|Caenorhabditis elegans PP2A-B
regulatory subunit PR55/B protein.
Length = 495
Score = 27.1 bits (57), Expect = 6.9
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = -2
Query: 407 SLELGTEILWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLSPGFKMCT 228
SLE+ +I ++ + KN++ I N+KTI W+ + K G + NL ++ T
Sbjct: 128 SLEIDEKIN--QIRWLKKKNAANFILSTNDKTIKLWKISERERKIGDDAWNLPRTNRINT 185
Query: 227 S-----LMI-SIVPFEILV 189
S L I SIVP E++V
Sbjct: 186 SSFRGRLQIPSIVPMELIV 204
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 95 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQR 205
P+P P Q S T A Q P + P + +FQ+
Sbjct: 386 PIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQ 422
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 95 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQR 205
P+P P Q S T A Q P + P + +FQ+
Sbjct: 770 PIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQ 806
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 95 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQR 205
P+P P Q S T A Q P + P + +FQ+
Sbjct: 749 PIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQ 785
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 95 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQR 205
P+P P Q S T A Q P + P + +FQ+
Sbjct: 749 PIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQQFQQ 785
>U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical
protein C04E7.3 protein.
Length = 518
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 46 EGRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 159
+G L N V P P A++P +V NTG+GP +
Sbjct: 36 QGHASLPRNTV-GPPDPNALSPEGLVSRPLNTGVGPNQ 72
>L12018-10|AAA65466.2| 683|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 19 protein.
Length = 683
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 274 PFSTC*TSLHSHMVLLLSRYMIL 342
PFST T +HSH++ L +++L
Sbjct: 286 PFSTAKTVIHSHIISFLIGFLLL 308
>AY349018-1|AAQ55498.1| 310|Caenorhabditis elegans NHR-91B protein.
Length = 310
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 457 IVGYPIAKERAATLATPAWNLARRSSGLMSRISGAKIVPESYTCL 323
++G I E A A P L R + L+ S K+ PE+Y C+
Sbjct: 180 VLGKEIPLEHVAKEAGP---LVTRFTTLLHSFSNLKVSPEAYVCI 221
>AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein.
Length = 474
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 457 IVGYPIAKERAATLATPAWNLARRSSGLMSRISGAKIVPESYTCL 323
++G I E A A P L R + L+ S K+ PE+Y C+
Sbjct: 344 VLGKEIPLEHVAKEAGP---LVTRFTTLLHSFSNLKVSPEAYVCI 385
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +2
Query: 65 WRTKSRLQLVPVPLP--HCQSSFPPTTPASVQRKP 163
W + LQ P+P P +SSF P P VQ+ P
Sbjct: 273 WTPPTLLQPNPIPPPPQRNESSFDPYIPIGVQQPP 307
>AL132841-5|CAI46629.1| 310|Caenorhabditis elegans Hypothetical
protein Y15E3A.1b protein.
Length = 310
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 457 IVGYPIAKERAATLATPAWNLARRSSGLMSRISGAKIVPESYTCL 323
++G I E A A P L R + L+ S K+ PE+Y C+
Sbjct: 180 VLGKEIPLEHVAKEAGP---LVTRFTTLLHSFSNLKVSPEAYVCI 221
>AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical
protein Y15E3A.1a protein.
Length = 474
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 457 IVGYPIAKERAATLATPAWNLARRSSGLMSRISGAKIVPESYTCL 323
++G I E A A P L R + L+ S K+ PE+Y C+
Sbjct: 344 VLGKEIPLEHVAKEAGP---LVTRFTTLLHSFSNLKVSPEAYVCI 385
>AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 476
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 457 IVGYPIAKERAATLATPAWNLARRSSGLMSRISGAKIVPESYTCL 323
++G I E A A P L R + L+ S K+ PE+Y C+
Sbjct: 346 VLGKEIPLEHVAKEAGP---LVTRFTTLLHSFSNLKVSPEAYVCI 387
>AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 457 IVGYPIAKERAATLATPAWNLARRSSGLMSRISGAKIVPESYTCL 323
++G I E A A P L R + L+ S K+ PE+Y C+
Sbjct: 345 VLGKEIPLEHVAKEAGP---LVTRFTTLLHSFSNLKVSPEAYVCI 386
>AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 457 IVGYPIAKERAATLATPAWNLARRSSGLMSRISGAKIVPESYTCL 323
++G I E A A P L R + L+ S K+ PE+Y C+
Sbjct: 345 VLGKEIPLEHVAKEAGP---LVTRFTTLLHSFSNLKVSPEAYVCI 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,781,068
Number of Sequences: 27780
Number of extensions: 260097
Number of successful extensions: 930
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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