Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20668
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    76   9e-16
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   1.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.3  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   5.4  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    24   5.4  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   7.1  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   7.1  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   9.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 76.2 bits (179), Expect = 9e-16
 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
 Frame = +3

Query: 351 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA-YQT 527
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++ +A  QT
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 528 GSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGH 683
           GSGKT A++LP I H ++ +  +  R   P  +++APTRELA QI      F H
Sbjct: 221 GSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAH 274


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -2

Query: 153 RRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDVYLNYGFFLTQ 13
           RR+ A+  A ++F          I+   YF D+V DV L Y  +  Q
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALYERQ 105


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = -1

Query: 226 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 131
           A +R+  SHQS  IL+      I CHRC+   + +R C
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 505 RISWRTKRVPAKRWPT 552
           R+ WR K +P  RW T
Sbjct: 239 RLDWRIKILPLPRWNT 254


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +1

Query: 226 QNMRRPDWDSFHSNLSTKTFMIHILQFSKDHHMKSKSIEINTR 354
           QN+ RP+       L+T  F +++ Q  +  H++   + I +R
Sbjct: 94  QNISRPNLGELFQKLTTGFFSLNLFQIGQ--HVRGVLVSIKSR 134


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 115 WNHRFHGYYSNY 80
           W  R HGYY+NY
Sbjct: 197 WIIRPHGYYANY 208


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 303 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 395
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 517 RTKRVPAKRWPT 552
           R +R+PA++WPT
Sbjct: 203 RQQRLPAQQWPT 214


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,815
Number of Sequences: 2352
Number of extensions: 15588
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)