Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20667
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin...    48   7e-06
U67949-5|AAB07566.1|  705|Caenorhabditis elegans Hypothetical pr...    33   0.27 
Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical pr...    31   0.63 
Z81062-8|CAD59145.1|  808|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z81124-2|CAB03368.1|  151|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z81062-7|CAB02942.1|  755|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AC006630-5|AAK68323.1|  335|Caenorhabditis elegans Collagen prot...    29   4.5  
Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin
           converting enzyme)-like non-peptidase protein 1, isoform
           a protein.
          Length = 906

 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = +1

Query: 16  REIVCH-ASAWDFFDGEDFRIKQCTTVDYEYFQTTHHEMGHIQYYLQYRDQPVVFRDGAN 192
           ++++CH A+A D     DFR+K C  +    F+  H  +    Y   Y+DQ ++FR+ A+
Sbjct: 496 KDMICHPAAALDMRAPNDFRVKACAQLGEPDFEQAHSLLVQTYYQYLYKDQSLLFREQAS 555

Query: 193 QGFHEAVGDTIALSVSSPKHL 255
               +A+ +  A   ++P +L
Sbjct: 556 PVITDAIANAFAHLSTNPHYL 576



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +3

Query: 303 INQLYKMGIDKIAFLPFAYTLDLFRYGVFRRKTLPEDYNCHYWKLREQLQGVEPPVNRTE 482
           IN+LYK  ++    LPF    D +RY +F         N  +W++R + +GV  P     
Sbjct: 595 INKLYKESLESFTKLPFTIAADNWRYELFDGTVPKNKLNDRWWEIRNKYEGVRSPQPYNT 654

Query: 483 DDFDA 497
            + DA
Sbjct: 655 SNLDA 659


>U67949-5|AAB07566.1|  705|Caenorhabditis elegans Hypothetical
           protein F55A4.5 protein.
          Length = 705

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +2

Query: 35  PPPGTSLMVKILGSNSARQSITNTSRPPTTRWGTSSTTCSTGINPLCSGTERTKVSTKR 211
           PPPG SL+ K++  + +   I++ + PP T    S++   T      S  E+T +S KR
Sbjct: 486 PPPGKSLLKKMIDCDPSLPEISHWTGPPPTAVSVSTSEPDTSEAAQLS-PEQTDISEKR 543


>Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical
           protein R07E3.6 protein.
          Length = 927

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 74  SNSARQSITNTSRPPTTRWGTSSTTCSTGINPLCSGTERTK 196
           + +  QS T T++ PTT   T  TT +T ++PL    E  K
Sbjct: 346 TTTTTQSTTTTTQLPTTTTTTEPTTTTTTVDPLAENEELEK 386


>Z81062-8|CAD59145.1|  808|Caenorhabditis elegans Hypothetical
           protein F15A4.8b protein.
          Length = 808

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = +2

Query: 65  ILGSNSARQSITNTSRPPTTRWG-----TSSTTCSTGINPLCSGTERTKVSTKRSGT 220
           +L ++SAR ++T+T+  PTT        TS+TT  +   P    T    V TK S T
Sbjct: 398 LLNASSARPNVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPV-TKSSST 453


>Z81124-2|CAB03368.1|  151|Caenorhabditis elegans Hypothetical
           protein T21B4.3 protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +2

Query: 47  TSLMVKILGSNSARQSITNTSRPPTTRWGTSSTTCSTGINPLCSGTERTKVSTKRSG 217
           TS    +  ++++  +   T+ PPTT   T  TTC+  +  L  GT+    +T   G
Sbjct: 25  TSPTTTVTTTDASVTTTPPTTTPPTTAVVTDCTTCTAALITLTQGTDGAVDATPVEG 81


>Z81062-7|CAB02942.1|  755|Caenorhabditis elegans Hypothetical
           protein F15A4.8a protein.
          Length = 755

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 65  ILGSNSARQSITNTSRPPTTRWGTSSTTCSTGINPLCSGTERTKVST 205
           +L ++SAR ++T+T+  PTT   T+    ST   P+   +    V +
Sbjct: 375 LLNASSARPNVTSTTTAPTTESSTTPPVESTTTAPVTKSSSTPPVKS 421


>AC006630-5|AAK68323.1|  335|Caenorhabditis elegans Collagen protein
           165 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
 Frame = +3

Query: 111 DHPPRDGAHPVLPAVPGSTRCV--QGRSEPRFPRSGRGHDSSLG 236
           D P  +G  PV+ A P    C   QG + P  P    GHD   G
Sbjct: 121 DQPSNNGYGPVVNAEPAPQCCTCQQGNAGPPGPPGDDGHDGKDG 164


>Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical
           protein F35E2.5 protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 98  TNTSRPPTTRWGTSSTTCSTGINPLCSGTERTKVSTKRSGT 220
           TNT++PPTT   +S+T   T +    S TE T  S+ ++ T
Sbjct: 396 TNTTQPPTTTPLSSTTALPTTLTS-SSSTESTDGSSTQTST 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,878,866
Number of Sequences: 27780
Number of extensions: 330310
Number of successful extensions: 1163
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)