Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20665
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   2.3  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   3.1  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   5.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   5.4  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   5.4  
AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal ...    23   9.4  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
 Frame = -2

Query: 130 PCSTSLAFHSASKCRLSCCSHRVC---FIQNDQF 38
           PC        A KC+ SC    VC   F++  QF
Sbjct: 37  PCPQKACISEAVKCQTSCLPGCVCKKGFVRETQF 70


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 353 WQHCSAVSALRRSPSQVSTAWFRISPS 273
           W  C +  A RRS S   T+W R  P+
Sbjct: 268 WPSCRSPPARRRSRSTRPTSWPRSRPT 294


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 443 LMLRYSLTNFSGTSPVTSISPSAVILPYN 357
           L+L ++    +GT P  ++ P+ V+LP N
Sbjct: 31  LVLDHTELPLAGTIPPAALMPARVLLPSN 59


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 480 PDASVFGIAALEQLSATVVAAGHLTNKQ 563
           PD  + G+A+    S+ +VAAG + N +
Sbjct: 882 PDVVISGLASNNSSSSNLVAAGMVINDE 909


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 21  DHVPHTNWSFWMKQTR*LQQLKRHFDALW 107
           D  P  N++FW      L+ ++ H   LW
Sbjct: 517 DTTPECNYTFWEWLYAALKIIRDHLQVLW 545


>AY187040-1|AAO39754.1|  211|Anopheles gambiae putative antennal
           carrier protein A5 protein.
          Length = 211

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 553 VRCPAATTVALNCSRAAMPNTLASGNSEQIPPILN 449
           V C A   +     +AA P T A G +E +P +++
Sbjct: 9   VACGAVLALVTVRGQAANPTTEAFGRNEIVPGLID 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,043
Number of Sequences: 2352
Number of extensions: 13368
Number of successful extensions: 72
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)