Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20665
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-... 110 4e-24
CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein. 110 4e-24
BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C (a... 110 4e-24
BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C (a... 110 4e-24
BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C (a... 110 4e-24
AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C (a... 110 4e-24
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 80 7e-15
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 80 7e-15
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 80 7e-15
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 80 7e-15
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 80 7e-15
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 80 7e-15
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 61 4e-09
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 61 4e-09
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 61 4e-09
L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-... 49 2e-05
BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C (a... 49 2e-05
BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C (a... 49 2e-05
AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C (a... 49 2e-05
AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C (a... 49 2e-05
AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3 ... 48 2e-05
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 46 1e-04
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 46 1e-04
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 46 1e-04
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 46 1e-04
M62424-1|AAA36743.1| 425|Homo sapiens thrombin receptor protein. 30 7.1
BT007279-1|AAP35943.1| 425|Homo sapiens coagulation factor II (... 30 7.1
BC051909-1|AAH51909.1| 425|Homo sapiens coagulation factor II (... 30 7.1
BC002464-1|AAH02464.1| 425|Homo sapiens coagulation factor II (... 30 7.1
AF391809-1|AAK69768.1| 425|Homo sapiens coagulation factor II (... 30 7.1
>M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-kDa
subunit protein.
Length = 363
Score = 110 bits (265), Expect = 4e-24
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +2
Query: 2 GKRADGRPCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITS 181
G R+DG+PCP +K+VILDEADSMT+AAQAAL FCLICNYVSRII P+TS
Sbjct: 133 GSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTS 192
Query: 182 RCSKFRFKPLARENVIKRLREICE 253
RCSKFRFKPL+ + +RL +I +
Sbjct: 193 RCSKFRFKPLSDKIQQQRLLDIAK 216
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 531 VVAAGHLTNKQKCAISEKTAVCLHRLLDGGSEFMQLTDLGCTLIMANNNP*C 686
VV +L++KQK I+EK A L DG E +QL L C +M + C
Sbjct: 313 VVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISL-CATVMQQLSQNC 363
>CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein.
Length = 363
Score = 110 bits (265), Expect = 4e-24
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +2
Query: 2 GKRADGRPCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITS 181
G R+DG+PCP +K+VILDEADSMT+AAQAAL FCLICNYVSRII P+TS
Sbjct: 133 GSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTS 192
Query: 182 RCSKFRFKPLARENVIKRLREICE 253
RCSKFRFKPL+ + +RL +I +
Sbjct: 193 RCSKFRFKPLSDKIQQQRLLDIAK 216
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 531 VVAAGHLTNKQKCAISEKTAVCLHRLLDGGSEFMQLTDLGCTLIMANNNP*C 686
VV +L++KQK I+EK A L DG E +QL L C +M + C
Sbjct: 313 VVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISL-CATVMQQLSQNC 363
>BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 110 bits (265), Expect = 4e-24
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +2
Query: 2 GKRADGRPCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITS 181
G R+DG+PCP +K+VILDEADSMT+AAQAAL FCLICNYVSRII P+TS
Sbjct: 133 GSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTS 192
Query: 182 RCSKFRFKPLARENVIKRLREICE 253
RCSKFRFKPL+ + +RL +I +
Sbjct: 193 RCSKFRFKPLSDKIQQQRLLDIAK 216
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 531 VVAAGHLTNKQKCAISEKTAVCLHRLLDGGSEFMQLTDLGCTLIMANNNP*C 686
VV +L++KQK I+EK A L DG E +QL L C +M + C
Sbjct: 313 VVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISL-CATVMQQLSQNC 363
>BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 110 bits (265), Expect = 4e-24
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +2
Query: 2 GKRADGRPCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITS 181
G R+DG+PCP +K+VILDEADSMT+AAQAAL FCLICNYVSRII P+TS
Sbjct: 133 GSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTS 192
Query: 182 RCSKFRFKPLARENVIKRLREICE 253
RCSKFRFKPL+ + +RL +I +
Sbjct: 193 RCSKFRFKPLSDKIQQQRLLDIAK 216
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 531 VVAAGHLTNKQKCAISEKTAVCLHRLLDGGSEFMQLTDLGCTLIMANNNP*C 686
VV +L++KQK I+EK A L DG E +QL L C +M + C
Sbjct: 313 VVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISL-CATVMQQLSQNC 363
>BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 110 bits (265), Expect = 4e-24
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +2
Query: 2 GKRADGRPCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITS 181
G R+DG+PCP +K+VILDEADSMT+AAQAAL FCLICNYVSRII P+TS
Sbjct: 133 GSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTS 192
Query: 182 RCSKFRFKPLARENVIKRLREICE 253
RCSKFRFKPL+ + +RL +I +
Sbjct: 193 RCSKFRFKPLSDKIQQQRLLDIAK 216
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 531 VVAAGHLTNKQKCAISEKTAVCLHRLLDGGSEFMQLTDLGCTLIMANNNP*C 686
VV +L++KQK I+EK A L DG E +QL L C +M + C
Sbjct: 313 VVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISL-CATVMQQLSQNC 363
>AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C
(activator 1) 4 (37kD) protein.
Length = 363
Score = 110 bits (265), Expect = 4e-24
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +2
Query: 2 GKRADGRPCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITS 181
G R+DG+PCP +K+VILDEADSMT+AAQAAL FCLICNYVSRII P+TS
Sbjct: 133 GSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTS 192
Query: 182 RCSKFRFKPLARENVIKRLREICE 253
RCSKFRFKPL+ + +RL +I +
Sbjct: 193 RCSKFRFKPLSDKIQQQRLLDIAK 216
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 531 VVAAGHLTNKQKCAISEKTAVCLHRLLDGGSEFMQLTDLGCTLIMANNNP*C 686
VV +L++KQK I+EK A L DG E +QL L C +M + C
Sbjct: 313 VVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISL-CATVMQQLSQNC 363
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 80.2 bits (189), Expect = 7e-15
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+KLVILDEAD+MT AQ AL FCLICNY+S+IIP + SRC++FRF PL
Sbjct: 119 FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLT 178
Query: 215 RENVIKRLREICE 253
E ++ RL + E
Sbjct: 179 PELMVPRLEHVVE 191
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 256 ENVDVGEGEILNQAVDTCEGDLRRALTALQCCQRLYGRITADGLIEVTG 402
E VD+ E + + V GD+RRAL LQ +G++T + + TG
Sbjct: 193 EKVDISE-DGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG 240
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 80.2 bits (189), Expect = 7e-15
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+KLVILDEAD+MT AQ AL FCLICNY+S+IIP + SRC++FRF PL
Sbjct: 119 FKLVILDEADAMTQDAQNALRGVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLT 178
Query: 215 RENVIKRLREICE 253
E ++ RL + E
Sbjct: 179 PELMVPRLEHVVE 191
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 256 ENVDVGEGEILNQAVDTCEGDLRRALTALQCCQRLYGRITADGLIEVTG 402
E VD+ E + + V GD+RRAL LQ +G++T + + TG
Sbjct: 193 EKVDISE-DGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG 240
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 80.2 bits (189), Expect = 7e-15
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+KLVILDEAD+MT AQ AL FCLICNY+S+IIP + SRC++FRF PL
Sbjct: 119 FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLT 178
Query: 215 RENVIKRLREICE 253
E ++ RL + E
Sbjct: 179 PELMVPRLEHVVE 191
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 256 ENVDVGEGEILNQAVDTCEGDLRRALTALQCCQRLYGRITADGLIEVTG 402
E VD+ E + + V GD+RRAL LQ +G++T + + TG
Sbjct: 193 EKVDISE-DGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG 240
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 80.2 bits (189), Expect = 7e-15
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+KLVILDEAD+MT AQ AL FCLICNY+S+IIP + SRC++FRF PL
Sbjct: 119 FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLT 178
Query: 215 RENVIKRLREICE 253
E ++ RL + E
Sbjct: 179 PELMVPRLEHVVE 191
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 256 ENVDVGEGEILNQAVDTCEGDLRRALTALQCCQRLYGRITADGLIEVTG 402
E VD+ E + + V GD+RRAL LQ +G++T + + TG
Sbjct: 193 EKVDISE-DGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG 240
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 80.2 bits (189), Expect = 7e-15
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+KLVILDEAD+MT AQ AL FCLICNY+S+IIP + SRC++FRF PL
Sbjct: 119 FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLT 178
Query: 215 RENVIKRLREICE 253
E ++ RL + E
Sbjct: 179 PELMVPRLEHVVE 191
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 256 ENVDVGEGEILNQAVDTCEGDLRRALTALQCCQRLYGRITADGLIEVTG 402
E VD+ E + + V GD+RRAL LQ +G++T + + TG
Sbjct: 193 EKVDISE-DGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG 240
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 80.2 bits (189), Expect = 7e-15
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+KLVILDEAD+MT AQ AL FCLICNY+S+IIP + SRC++FRF PL
Sbjct: 133 FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLT 192
Query: 215 RENVIKRLREICE 253
E ++ RL + E
Sbjct: 193 PELMVPRLEHVVE 205
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 256 ENVDVGEGEILNQAVDTCEGDLRRALTALQCCQRLYGRITADGLIEVTG 402
E VD+ E + + V GD+RRAL LQ +G++T + + TG
Sbjct: 207 EKVDISE-DGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG 254
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 60.9 bits (141), Expect = 4e-09
Identities = 31/77 (40%), Positives = 40/77 (51%)
Frame = +2
Query: 23 PCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRF 202
P +K++ILDEADSMT AQ AL F L CN +II PI SRC+ R+
Sbjct: 131 PKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRY 190
Query: 203 KPLARENVIKRLREICE 253
L ++ RL + E
Sbjct: 191 TKLTDAQILTRLMNVIE 207
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 60.9 bits (141), Expect = 4e-09
Identities = 31/77 (40%), Positives = 40/77 (51%)
Frame = +2
Query: 23 PCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRF 202
P +K++ILDEADSMT AQ AL F L CN +II PI SRC+ R+
Sbjct: 131 PKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRY 190
Query: 203 KPLARENVIKRLREICE 253
L ++ RL + E
Sbjct: 191 TKLTDAQILTRLMNVIE 207
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 60.9 bits (141), Expect = 4e-09
Identities = 31/77 (40%), Positives = 40/77 (51%)
Frame = +2
Query: 23 PCPSYKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRF 202
P +K++ILDEADSMT AQ AL F L CN +II PI SRC+ R+
Sbjct: 131 PKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRY 190
Query: 203 KPLARENVIKRLREICE 253
L ++ RL + E
Sbjct: 191 TKLTDAQILTRLMNVIE 207
>L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-kDa
subunit protein.
Length = 356
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+K+V+L E D +T AQ AL L CN S++IPPI SRC R +
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 215 RENVIKRLREICE 253
E++ L +C+
Sbjct: 189 IEDICHVLSTVCK 201
>BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+K+V+L E D +T AQ AL L CN S++IPPI SRC R +
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 215 RENVIKRLREICE 253
E++ L +C+
Sbjct: 189 IEDICHVLSTVCK 201
>BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+K+V+L E D +T AQ AL L CN S++IPPI SRC R +
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 215 RENVIKRLREICE 253
E++ L +C+
Sbjct: 189 IEDICHVLSTVCK 201
>AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+K+V+L E D +T AQ AL L CN S++IPPI SRC R +
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 215 RENVIKRLREICE 253
E++ L +C+
Sbjct: 189 IEDICHVLSTVCK 201
>AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C
(activator 1) 3 (38kD) protein.
Length = 356
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+K+V+L E D +T AQ AL L CN S++IPPI SRC R +
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 215 RENVIKRLREICE 253
E++ L +C+
Sbjct: 189 IEDICHVLSTVCK 201
>AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3
isoform 1 variant protein.
Length = 356
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +2
Query: 35 YKLVILDEADSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLA 214
+K+V+L E D +T AQ AL L CN S++IPPI SRC R +
Sbjct: 129 FKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPS 188
Query: 215 RENVIKRLREICE 253
E + L +C+
Sbjct: 189 IEGICHVLSTVCK 201
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/64 (37%), Positives = 30/64 (46%)
Frame = +2
Query: 62 DSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLARENVIKRLR 241
DSMT AQ AL F L CN +II PI SRC+ R+ L ++ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 242 EICE 253
+ E
Sbjct: 170 NVIE 173
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/64 (37%), Positives = 30/64 (46%)
Frame = +2
Query: 62 DSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLARENVIKRLR 241
DSMT AQ AL F L CN +II PI SRC+ R+ L ++ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 242 EICE 253
+ E
Sbjct: 170 NVIE 173
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/64 (37%), Positives = 30/64 (46%)
Frame = +2
Query: 62 DSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLARENVIKRLR 241
DSMT AQ AL F L CN +II PI SRC+ R+ L ++ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 242 EICE 253
+ E
Sbjct: 170 NVIE 173
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/64 (37%), Positives = 30/64 (46%)
Frame = +2
Query: 62 DSMTTAAQAALXXXXXXXXXXXXFCLICNYVSRIIPPITSRCSKFRFKPLARENVIKRLR 241
DSMT AQ AL F L CN +II PI SRC+ R+ L ++ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 242 EICE 253
+ E
Sbjct: 170 NVIE 173
>M62424-1|AAA36743.1| 425|Homo sapiens thrombin receptor protein.
Length = 425
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 640 VSCMNSDPPSSRRCRQTAVFSLMAHFCLFVRCPAATTVAL 521
+ C++S ++R + A+F A FC+F+ C T V L
Sbjct: 294 IRCLSSSAVANRSKKSRALFLSAAVFCIFIICFGPTNVLL 333
>BT007279-1|AAP35943.1| 425|Homo sapiens coagulation factor II
(thrombin) receptor protein.
Length = 425
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 640 VSCMNSDPPSSRRCRQTAVFSLMAHFCLFVRCPAATTVAL 521
+ C++S ++R + A+F A FC+F+ C T V L
Sbjct: 294 IRCLSSSAVANRSKKSRALFLSAAVFCIFIICFGPTNVLL 333
>BC051909-1|AAH51909.1| 425|Homo sapiens coagulation factor II
(thrombin) receptor protein.
Length = 425
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 640 VSCMNSDPPSSRRCRQTAVFSLMAHFCLFVRCPAATTVAL 521
+ C++S ++R + A+F A FC+F+ C T V L
Sbjct: 294 IRCLSSSAVANRSKKSRALFLSAAVFCIFIICFGPTNVLL 333
>BC002464-1|AAH02464.1| 425|Homo sapiens coagulation factor II
(thrombin) receptor protein.
Length = 425
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 640 VSCMNSDPPSSRRCRQTAVFSLMAHFCLFVRCPAATTVAL 521
+ C++S ++R + A+F A FC+F+ C T V L
Sbjct: 294 IRCLSSSAVANRSKKSRALFLSAAVFCIFIICFGPTNVLL 333
>AF391809-1|AAK69768.1| 425|Homo sapiens coagulation factor II
(thrombin) receptor protein.
Length = 425
Score = 30.3 bits (65), Expect = 7.1
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 640 VSCMNSDPPSSRRCRQTAVFSLMAHFCLFVRCPAATTVAL 521
+ C++S ++R + A+F A FC+F+ C T V L
Sbjct: 294 IRCLSSSAVANRSKKSRALFLSAAVFCIFIICFGPTNVLL 333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,323,242
Number of Sequences: 237096
Number of extensions: 1927381
Number of successful extensions: 4414
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4414
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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