BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20665
(707 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 24 1.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.1
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 5.0
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 6.6
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 6.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 8.7
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 8.7
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 8.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 8.7
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 8.7
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 8.7
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.7
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 8.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 8.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 8.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 8.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.7
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -2
Query: 370 SCRTTFGNTVVLLALCAD-HLH 308
S T FGNT+V+LA+ + +LH
Sbjct: 56 SVATVFGNTLVILAVVRERYLH 77
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 553 VRCPAATTVALNCSRAAMPNTLASG 479
VRC A T+ +L S PNT ++G
Sbjct: 1118 VRCAALTSQSLQVSWQPPPNTHSNG 1142
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 553 VRCPAATTVALNCSRAAMPNTLASG 479
VRC A T+ +L S PNT ++G
Sbjct: 1114 VRCAALTSQSLQVSWQPPPNTHSNG 1138
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 367 CRTTFGNTVVLLAL 326
C T FGN +V+LA+
Sbjct: 198 CLTLFGNVLVILAV 211
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 314 PSQVSTAWFRISPSPTSTFSLHIS 243
P+ S W R++P+ S LHI+
Sbjct: 505 PNVNSVQWPRLNPNEKSLHYLHIA 528
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 314 PSQVSTAWFRISPSPTSTFSLHIS 243
P+ S W R++P+ S LHI+
Sbjct: 505 PNVNSVQWPRLNPNEKSLHYLHIA 528
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 27 EKLLEERTSRKRYSRSREREQN 48
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 462 GICSEFPDASVFGIAAL 512
G+C E PD +G L
Sbjct: 385 GLCKEGPDVKAYGAGLL 401
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 249 EKLLEERTSRKRYSRSREREQN 270
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 249 EKLLEERTSRKRYSRSREREQN 270
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 260 EKLLEERTSRKRYSRSREREQN 281
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 412 EKLVNEYLSIKNYSELEEFVQN 477
EKL+ E S K YS E QN
Sbjct: 260 EKLLEERTSRKRYSRSREREQN 281
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,700
Number of Sequences: 438
Number of extensions: 3760
Number of successful extensions: 33
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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