Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20664
(409 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 107 3e-24
03_01_0547 + 4093196-4093657,4094267-4095148 107 3e-24
03_01_0544 + 4082528-4082989,4083585-4084466 107 3e-24
03_01_0543 + 4076981-4077442,4078145-4079026 107 3e-24
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 71 4e-13
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 71 4e-13
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 69 1e-12
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 48 4e-06
02_04_0462 + 23131433-23132836 46 2e-05
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 43 1e-04
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 40 8e-04
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 37 0.005
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 36 0.009
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 36 0.012
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 35 0.029
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 33 0.066
03_05_0511 + 25056018-25059107 32 0.20
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.47
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.47
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 0.62
01_06_0662 + 30987187-30987277,30987825-30990214 30 0.81
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 29 1.4
02_04_0148 - 20198407-20201424 29 1.4
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 3.3
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 27 4.3
12_01_0527 - 4177928-4178235,4178849-4181438 27 5.7
01_06_0641 - 30782235-30782423,30782498-30782605,30782848-307829... 27 5.7
10_08_0325 - 16752288-16752712,16755256-16757653 27 7.6
01_06_1507 - 37838645-37839311,37839393-37839499,37839588-378396... 27 7.6
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 107 bits (257), Expect = 3e-24
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +2
Query: 260 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNM
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNM 102
Score = 99 bits (238), Expect = 7e-22
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 107 bits (257), Expect = 3e-24
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +2
Query: 260 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNM
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNM 102
Score = 99 bits (238), Expect = 7e-22
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 107 bits (257), Expect = 3e-24
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +2
Query: 260 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNM
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNM 102
Score = 99 bits (238), Expect = 7e-22
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 107 bits (257), Expect = 3e-24
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +2
Query: 260 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNM
Sbjct: 53 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNM 102
Score = 99 bits (238), Expect = 7e-22
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 70.9 bits (166), Expect = 4e-13
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +2
Query: 218 HREVREGGPGNG*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 397
H+ +E G GSF YAW +D+ ERERG+T+ +A+ ET KY V ++D+PGH+DF
Sbjct: 280 HKNEKEAKE-KGKGSFAYAWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDF 338
Query: 398 IKNM 409
+ NM
Sbjct: 339 VPNM 342
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = +3
Query: 120 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GK
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGK 291
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 70.9 bits (166), Expect = 4e-13
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +2
Query: 218 HREVREGGPGNG*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 397
H+ +E G GSF YAW +D+ ERERG+T+ +A+ ET KY V ++D+PGH+DF
Sbjct: 280 HKNEKEAKE-KGKGSFAYAWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDF 338
Query: 398 IKNM 409
+ NM
Sbjct: 339 VPNM 342
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = +3
Query: 120 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GK
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGK 291
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 69.3 bits (162), Expect = 1e-12
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +2
Query: 251 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
G GSF YAW +D+ ERERGIT+ + + F+T Y+V ++D+PGH+DF+ NM
Sbjct: 277 GKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNM 329
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 47.6 bits (108), Expect = 4e-06
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 281 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
+DK E+ RGITI A ++ET+K + +D PGH D++KNM
Sbjct: 105 IDKAPEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNM 147
Score = 32.3 bits (70), Expect = 0.15
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 111 KEKTHINIVVIGHVDSGKSTTT 176
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLT 84
>02_04_0462 + 23131433-23132836
Length = 467
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 281 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
+D ER RGITI+ A ++ET + +D PGH D++KNM
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNM 150
Score = 35.9 bits (79), Expect = 0.012
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 102 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 236
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE 107
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 153 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 260
D+GKST G +++ G +D RTI+K+EKEA++ ++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRE 39
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 260 SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAP----GHRDFIKNM 409
S+ A+++D + ER +G T+++ FET TI+DAP GH+ ++ NM
Sbjct: 40 SWYMAYIMDTNEEERLKGKTVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNM 93
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 39.9 bits (89), Expect = 8e-04
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2
Query: 281 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 397
+D + ERE+GITI A + Y V IID PGH DF
Sbjct: 111 MDSMDLEREKGITIQSAATYCTWNGYQVNIIDTPGHVDF 149
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCGGI 206
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 37.1 bits (82), Expect = 0.005
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 308 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
+G T+++ FET TI+DAPGH+ ++ NM
Sbjct: 15 KGKTVEVGRAHFETETTRFTILDAPGHKSYVPNM 48
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 36.3 bits (80), Expect = 0.009
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 257 GSFKYAWV-LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 397
G F+ V +D ++ E+ERGITI +K+ + IID PGH DF
Sbjct: 135 GEFQEGTVTMDWMEQEQERGITITSPPTTAFWNKHRINIIDTPGHVDF 182
Score = 30.7 bits (66), Expect = 0.47
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 123 HINIVVIGHVDSGKSTTTGHLIYKCG 200
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 35.9 bits (79), Expect = 0.012
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 281 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 397
+D + ERERGITI + + + ++D PGH DF
Sbjct: 98 MDSISLERERGITIASKVTSVSWKENELNMVDTPGHADF 136
Score = 31.5 bits (68), Expect = 0.27
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCG 200
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 34.7 bits (76), Expect = 0.029
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +2
Query: 281 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHRDF 397
LD + ERERGITI + + Y + +ID PGH DF
Sbjct: 114 LDNMDLERERGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDF 156
Score = 29.9 bits (64), Expect = 0.81
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 227
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 33.5 bits (73), Expect = 0.066
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 278 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 397
++D ERERGITI + IID PGH DF
Sbjct: 156 IMDSNDLERERGITILSKNTSITYKGTKINIIDTPGHSDF 195
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.20
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCG 200
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 31.1 bits (67), Expect = 0.35
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 281 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 397
+D L E+ R IT+ A + V +ID+PGH DF
Sbjct: 50 MDYLDEEQRRAITMKSAAVVLHHGGHRVNLIDSPGHIDF 88
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 30.7 bits (66), Expect = 0.47
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 200
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 30.7 bits (66), Expect = 0.47
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 200
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 0.62
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 200
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Frame = +2
Query: 323 DIALWKFETSK----YYVTIIDAPGHRDF 397
D AL FE + Y + +ID+PGH DF
Sbjct: 83 DAALRSFEGKRDGNSYLINLIDSPGHIDF 111
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 0.81
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 200
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 15/54 (27%)
Frame = +2
Query: 281 LDKLKAERERGITIDI---------------ALWKFETSKYYVTIIDAPGHRDF 397
LDKL+ ERERGIT+ A + + Y + +ID PGH DF
Sbjct: 94 LDKLQVERERGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDF 147
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 212
N +I HVD GKST L+ G I K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 129 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 251
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Frame = +2
Query: 272 AWVLDKLKAERERGITI---DIALWKF--ETSKYYVTIIDAPGHRDF 397
A V+D L+ E+ R IT+ IAL + + + V +ID+PGH DF
Sbjct: 54 ARVMDHLEEEQRRAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDF 100
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 117 KTHINIVVIGHVDSG 161
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>02_02_0011 +
6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 283 QYPSIFEGSLPISWASFSNFSM 218
+YPS+F SLP W + FSM
Sbjct: 31 EYPSMFYPSLPADWGAQPMFSM 52
>12_01_0527 - 4177928-4178235,4178849-4181438
Length = 965
Score = 27.1 bits (57), Expect = 5.7
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = -1
Query: 355 LASFELPESNI--DCDTTLTLSL*-FVQYPSIFEGSLPISWASFSNFSMVRLS 206
L S L +N+ D T++T SL V + F GS+PI+ ++ N +M+ LS
Sbjct: 190 LRSLNLSSNNLAGDVPTSMTPSLEELVLSINNFSGSIPIALFNYQNLTMLDLS 242
>01_06_0641 -
30782235-30782423,30782498-30782605,30782848-30782959,
30783429-30783526,30784249-30784336,30784780-30784875,
30785101-30785171,30786003-30786075,30787023-30787324,
30787418-30787503,30788024-30788084,30789386-30789688
Length = 528
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 65 KSEINIPITPLTKNGQGKDS 124
K N+PITP T GQ +DS
Sbjct: 135 KHHQNVPITPTTNYGQAEDS 154
>10_08_0325 - 16752288-16752712,16755256-16757653
Length = 940
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 268 FEGSLPISWASFSNFSMVRLS 206
F+G LP WA F + S + LS
Sbjct: 376 FDGELPEHWAQFKSLSFLHLS 396
>01_06_1507 -
37838645-37839311,37839393-37839499,37839588-37839663,
37839747-37839869,37840051-37840208,37840311-37840385,
37840466-37840506,37840594-37840670,37840755-37840883,
37840990-37841060,37841237-37841332,37841489-37841584,
37841681-37841953,37842871-37842957,37843101-37843178,
37843350-37843514,37843622-37843768,37843921-37843983,
37844082-37844201,37844352-37844543,37844672-37844748,
37845094-37845196,37845684-37845887
Length = 1074
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 177 GHLIYKCGGIDKRTIEKFEKEAQE-MGKDPSNMLGYWT 287
GHL C G KR +F+++ + + K P L WT
Sbjct: 271 GHLAANCEGKVKRKAGEFDEKGEAIVPKKPYQFLNIWT 308
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,714,348
Number of Sequences: 37544
Number of extensions: 200441
Number of successful extensions: 657
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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