Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20664
(409 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 114 4e-28
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 113 1e-27
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 100 5e-24
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 68 5e-14
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.25
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.58
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 5.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 5.4
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 5.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 114 bits (274), Expect = 4e-28
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = +2
Query: 251 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
G GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 102
Score = 109 bits (262), Expect = 1e-26
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 113 bits (271), Expect = 1e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +2
Query: 251 G*GSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
G GSFKYAWVLDKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNM
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNM 102
Score = 109 bits (262), Expect = 1e-26
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +3
Query: 105 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 257
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 100 bits (240), Expect = 5e-24
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +2
Query: 275 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 409
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNM 45
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 67.7 bits (158), Expect = 5e-14
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 323 DIALWKFETSKYYVTIIDAPGHRDFIKNM 409
DIALWKFETSKYYVTIIDAPGHRDFIKNM
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNM 29
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.25
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 117 KTHINIVVIGHVDSGKST 170
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Score = 22.2 bits (45), Expect = 2.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 362 VTIIDAPGHRDFI 400
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.58
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 126 INIVVIGHVDSGKST 170
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 207 DKRTIEKFEKEAQEMG 254
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 207 DKRTIEKFEKEAQEMG 254
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 207 DKRTIEKFEKEAQEMG 254
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,544
Number of Sequences: 438
Number of extensions: 2018
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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