Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20663
(488 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 81 9e-17
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 7e-05
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 39 5e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 36 0.004
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 34 0.010
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.013
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.12
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.16
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.38
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.50
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 28 0.66
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 28 0.87
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 4.6
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 25 4.6
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 25 6.1
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 25 8.1
SPBC28F2.04c |cwf7|spf27|splicing factor Cwf7|Schizosaccharomyce... 25 8.1
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 81.0 bits (191), Expect = 9e-17
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +1
Query: 271 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 420
RYKGI + F R E+G++S WRGN ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 70 RYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF 119
Score = 50.0 bits (114), Expect = 2e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 146 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 241
F DF+ GG+SAAVSKTA APIERVKLL+Q Q
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQ 58
Score = 30.3 bits (65), Expect = 0.16
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +1
Query: 241 ARQQAIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 420
A+ ++++ G+VD + + + GL +RG +V+ + L F D K V
Sbjct: 164 AKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVV 223
Query: 421 LGG 429
L G
Sbjct: 224 LVG 226
Score = 29.1 bits (62), Expect = 0.38
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 435 QEDAFWRYFAGNLASGGA 488
+ D + ++FAGNLASGGA
Sbjct: 124 ERDGYAKWFAGNLASGGA 141
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.5 bits (93), Expect = 7e-05
Identities = 16/28 (57%), Positives = 26/28 (92%)
Frame = +2
Query: 161 LAGGISAAVSKTAVAPIERVKLLLQVQH 244
L+GG++A VS+TAV+P+ER+K++ QVQ+
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN 52
Score = 39.9 bits (89), Expect = 2e-04
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 265 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 414
++ Y + V+I +GL+ F+RGN N +R FP A+ FA + KQ
Sbjct: 53 NKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQ 102
Score = 30.3 bits (65), Expect = 0.16
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 390
YK I A I K +G+ F+RG +N+++ P ++ +
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 38.7 bits (86), Expect = 5e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 152 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS 250
K +AGG + V+K+ VAP++RVK+L Q H S
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHAS 51
Score = 29.9 bits (64), Expect = 0.22
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +1
Query: 280 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTHS 450
G+ A I GL ++G+ A + R FP + F ++ ++V + + +TH+
Sbjct: 61 GLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHA 117
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 35.5 bits (78), Expect = 0.004
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +1
Query: 244 RQQAIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 423
R Q Y G D +I K +G +RG ++ P +AL FA D Y +++
Sbjct: 35 RMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLWR 94
Query: 424 GGVDKKTHSGVTSLV 468
+K S S++
Sbjct: 95 KVFKRKDSSPALSIL 109
Score = 29.9 bits (64), Expect = 0.22
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 244 RQQAIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 411
R Q + +Y G VD F +I K++ +L+ + G A + R+ A F K +
Sbjct: 131 RLQDVKNASKYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIR 186
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 34.3 bits (75), Expect = 0.010
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 241 ARQQAIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 417
+R Q+++A + YK + +I + GLL FW G + R + + F +K ++
Sbjct: 229 SRMQSLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEI 287
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.013
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 134 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 232
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 31.1 bits (67), Expect = 0.093
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 414
Y G +D F + K +G ++G N+++ P+ A+++ + K+
Sbjct: 375 YDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKK 421
Score = 28.3 bits (60), Expect = 0.66
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 319 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTHSGVTS 462
G+ SF+ GN NV++ P ++ F + K+V + HS + S
Sbjct: 184 GIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVLGISSSSENHSPLYS 231
Score = 27.1 bits (57), Expect = 1.5
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +2
Query: 158 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 253
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 0.12
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 137 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 241
PV + +++G IS + V P+E V++ LQ+Q
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ 143
Score = 27.5 bits (58), Expect = 1.1
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 143 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQ 241
+F KDFLA G+S V++ V P + VK+ LQ Q
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQ 48
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.16
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 95 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 235
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
Score = 29.1 bits (62), Expect = 0.38
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 253 AIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 390
+I +Y G++ F + EQG++ + G A+++R P + F
Sbjct: 305 SINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.38
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 161 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 250
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 28.7 bits (61), Expect = 0.50
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 259 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 357
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
Score = 27.9 bits (59), Expect = 0.87
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 152 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 241
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
Score = 26.6 bits (56), Expect = 2.0
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 280 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 441
G + + I +G+ +RG ++ Y P+ ++ F +K K +F GV+KK
Sbjct: 53 GTLSSMRTIFHNEGIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 28.3 bits (60), Expect = 0.66
Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Frame = +1
Query: 241 ARQQAIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP---TQALNFAFKDKYK 411
AR+ A K + D + G + FW G F + + F AL
Sbjct: 200 ARKGEAALIWAVKSLRDGTIVSADSSGAVKFWNGKFFTLSQSFKLHLADALCLGVSANGD 259
Query: 412 QVFLGGVDKKT 444
VF G+D+KT
Sbjct: 260 MVFSSGIDRKT 270
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 27.9 bits (59), Expect = 0.87
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 161 LAGGISAAVSKTAVAPIERVKLLLQVQ 241
++GG+S A++ + P++ VK LLQ +
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTR 235
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 4.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 283 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 375
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 4.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 158 FLAGGISAAVSKTAVAPIERVKLLLQVQ 241
FL+GG++A + T P E +K Q+Q
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQ 54
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 25.0 bits (52), Expect = 6.1
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 244 RQQAIAADQRYKGIVDAFVRIPKEQGLL-SFWRGNFANVIRYFPTQALNFA 393
RQQA +Y G+V + I E+G+ + G +I P AL F+
Sbjct: 42 RQQAALYTNKYNGMVKCYSTILCEEGVFHGLYSGVCPMLIGSLPATALFFS 92
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 24.6 bits (51), Expect = 8.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 7 PNLLFKNQELVFRDPPSACAATPT 78
P + K E + RDPP A PT
Sbjct: 4 PKRIIKEIETLTRDPPPGIVAAPT 27
>SPBC28F2.04c |cwf7|spf27|splicing factor Cwf7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 187
Score = 24.6 bits (51), Expect = 8.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 307 GCGRRRRRYPCNAGRRRSLADVLY 236
GC R+R+ Y G R + A+V +
Sbjct: 147 GCNRKRKHYQMEVGARLAEAEVKF 170
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,847,414
Number of Sequences: 5004
Number of extensions: 33435
Number of successful extensions: 143
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 190087364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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