Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20663
(488 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 4e-15
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 42 2e-04
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 41 6e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 8e-04
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.004
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.010
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.014
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.055
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.072
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.13
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 33 0.13
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 33 0.17
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.22
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.22
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 31 0.39
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.51
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 1.2
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 30 1.2
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 1.2
SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11) 29 1.6
SB_46290| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 29 2.1
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.1
SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.7
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 3.6
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 3.6
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 28 4.7
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_47585| Best HMM Match : Umbravirus_LDM (HMM E-Value=1.7) 27 6.3
SB_32989| Best HMM Match : Umbravirus_LDM (HMM E-Value=3.4) 27 6.3
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 6.3
SB_22460| Best HMM Match : CCT (HMM E-Value=4.4) 27 6.3
SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029) 27 6.3
SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25) 27 6.3
SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25) 27 6.3
SB_55367| Best HMM Match : Granulin (HMM E-Value=0.00023) 27 8.3
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 77.8 bits (183), Expect = 4e-15
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = +1
Query: 265 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 420
D YKG++D R + +G LSFWRGN AN IRYFPTQALNFAFKD+ K +F
Sbjct: 50 DHPYKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF 101
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +2
Query: 146 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 241
F ++F G +A +SKTA APIERVKLL+Q Q
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQ 40
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 271 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 423
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/48 (41%), Positives = 35/48 (72%)
Frame = +1
Query: 271 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 414
++KG++ ++I KE+G+L +++GN NVIR FP A+ FA ++YK+
Sbjct: 70 KFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +2
Query: 152 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 241
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ 65
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 43.2 bits (97), Expect = 1e-04
Identities = 28/74 (37%), Positives = 38/74 (51%)
Frame = +1
Query: 250 QAIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 429
Q A+ GIV F + +E G+ S WRGN ANVI+ P + F +K K+ L G
Sbjct: 165 QVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPESGIKFFAYEKAKK--LVG 222
Query: 430 VDKKTHSGVTSLVI 471
D K GVT ++
Sbjct: 223 SDTKA-LGVTDRLL 235
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 167 GGISAAVSKTAVAPIERVKLLLQVQ 241
GG A VS+TA AP++R+K+LLQVQ
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ 167
Score = 33.9 bits (74), Expect = 0.072
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 253 AIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 423
AI +Y+G++ A I +++G+ SF+RG F +++ P ++ A + K +L
Sbjct: 259 AIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETLKNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +2
Query: 119 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 241
MS + F ++F G +A +SKTA APIERVKLL+Q Q
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQ 41
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWR 339
YKG+VD +R + +G+ SFWR
Sbjct: 54 YKGVVDCTMRTYRAEGIGSFWR 75
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 40.7 bits (91), Expect = 6e-04
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = +1
Query: 253 AIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 420
AI ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 18 AITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 40.3 bits (90), Expect = 8e-04
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +1
Query: 250 QAIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 414
Q + +Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 583 QIQVTNAKYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 39.5 bits (88), Expect = 0.001
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 256 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 393
+ + G++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 88 VGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 140 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQV 238
+ + + FL GG SA ++++ +P+E VK+L QV
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV 88
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 161 LAGGISAAVSKTAVAPIERVKLLLQVQHVSK 253
LAG S ++ V P E +K L VQHV+K
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK 187
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +1
Query: 217 CQAAAPSTARQQAIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 372
C+ Q ++ YKG+ A I +E+G+L+ ++G + + FP
Sbjct: 173 CEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLGLFP 224
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKTH 447
Y+G++ + KE+G+ +F+R + P Q L+F + ++ LGG D KTH
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKTH 91
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 423
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 34.7 bits (76), Expect = 0.041
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV---FLGG 429
YKG +D RI + +G+ + W+G R P L F F ++ + F GG
Sbjct: 133 YKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVLTFIFLEQLNRAANYFYGG 187
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.014
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 283 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 417
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.024
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 286 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 411
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 34.3 bits (75), Expect = 0.055
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 247 QQAIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 390
QQA A+++YKG +D +I + G+ ++G A ++R P A+ F
Sbjct: 222 QQASGAEKKYKGPIDCARQIYAQNGIRGVYKGVCATLLRDVPGTAMYF 269
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.072
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 304 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 417
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 271 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 390
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 390
Y+G VD V++ + +GL ++GN +R P A+ F
Sbjct: 75 YRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFAVYF 113
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 33.1 bits (72), Expect = 0.13
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = -3
Query: 270 LVGGDRLLTCCTWSSSLTRSIGATAVLETAAEIPPARKSLANATGSARFDILFDYVIFTR 91
L+G R ++ + + + V + A++PP R +A + + FD+ + I TR
Sbjct: 508 LIGSHRAVSKEISQCVVCKKLRGKPVEQHMADLPPDRTEVAPSFTNVGFDVFGPWTIHTR 567
Query: 90 *ICRGGSCGTRGWGI 46
RGG ++ WG+
Sbjct: 568 -KTRGGVLNSKRWGL 581
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/59 (20%), Positives = 30/59 (50%)
Frame = +1
Query: 244 RQQAIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 420
++ + A++ YK +D F ++ + +G + +RG ++ P +A+ D + +F
Sbjct: 944 QRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEKAIKLTTNDFVRGIF 1002
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 304 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 417
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = -3
Query: 270 LVGGDRLLTCCTWSSSLTRSIGATAVLETAAEIPPARKSLANATGSARFDILFDYVIFTR 91
L+G R ++ + + + V + A++PP R +A + FD+ + I TR
Sbjct: 1235 LIGSHRAVSKEISQCVVCKKLRGKPVEQHMADLPPDRTEVAPPFTNVGFDVFGPWTIHTR 1294
Query: 90 *ICRGGSCGTRGWGI 46
RGG ++ WG+
Sbjct: 1295 -KTRGGVLNSKRWGL 1308
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.5 bits (68), Expect = 0.39
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 170 GISAAVSKTAVAPIERVKLLLQVQH 244
G+S +KT AP+ER+K+L Q Q+
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN 87
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 134 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 241
DP K F + GI+A++++ A PI+ K+ LQ+Q
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQ 45
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 164 AGGISAAVSKTAVAPIERVKLLLQ 235
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 304 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF----LGGVDKKTHSGVTS 462
+P+E +L + G ++VI F A+N FK++YK++ G + + H+ VTS
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEGEHAHVTS 323
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 280 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 417
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11)
Length = 1170
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/75 (21%), Positives = 33/75 (44%)
Frame = -3
Query: 270 LVGGDRLLTCCTWSSSLTRSIGATAVLETAAEIPPARKSLANATGSARFDILFDYVIFTR 91
L+GG +T + + + + A++PP R + + + FD+ + + +R
Sbjct: 987 LIGGHATVTKAIKDCVTCKKLRGRPLEQRMADLPPDRTEVCSPFTNVGFDVFGPWSVKSR 1046
Query: 90 *ICRGGSCGTRGWGI 46
RG T+ WG+
Sbjct: 1047 -KTRGAIANTKRWGL 1060
>SB_46290| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1019
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/80 (21%), Positives = 34/80 (42%)
Frame = -3
Query: 285 DTLVTLVGGDRLLTCCTWSSSLTRSIGATAVLETAAEIPPARKSLANATGSARFDILFDY 106
DT L+GG +T + + + + A++PP R + + + FD+ +
Sbjct: 851 DTGFWLIGGHATVTKAIKDCVTCKKLRGRPLEQRMADLPPDRTEVCSPFTNVGFDVFGPW 910
Query: 105 VIFTR*ICRGGSCGTRGWGI 46
+ +R RG + WG+
Sbjct: 911 SVKSR-KTRGAIANAKRWGL 929
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 271 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 381
+Y G D +I G+ +F +G A ++R FPT A
Sbjct: 399 KYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/75 (20%), Positives = 32/75 (42%)
Frame = -3
Query: 270 LVGGDRLLTCCTWSSSLTRSIGATAVLETAAEIPPARKSLANATGSARFDILFDYVIFTR 91
L+GG +T + + + + A++PP R + + + FD+ + + +R
Sbjct: 1624 LIGGHTTVTKAIKDCVTCKKLRGRPLEQRMADLPPGRNEVCSPFTNVGFDVFGPWSVKSR 1683
Query: 90 *ICRGGSCGTRGWGI 46
RG + WG+
Sbjct: 1684 -KTRGSIANAKRWGL 1697
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 390
+KG +D F++ + +GL ++G + ++ P+ AL F
Sbjct: 62 FKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTALTF 100
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 307 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 423
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 442 SSCQRRRGTPACTCP 398
S CQRRRG C CP
Sbjct: 942 SKCQRRRGGAQCVCP 956
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 304 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 420
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWRG 342
YK + AF +I K++G L W G
Sbjct: 153 YKNMFHAFYKIAKKEGFLGLWTG 175
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 116 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 241
K+ N P + G +S +SK + P + +K +QVQ
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQ 60
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 247 QQAIAADQRYKGIVDAFVRIPKEQGLLSFWRG 342
+Q+ Q+Y G+ D F I KE+G + ++G
Sbjct: 66 RQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_47585| Best HMM Match : Umbravirus_LDM (HMM E-Value=1.7)
Length = 421
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/75 (20%), Positives = 32/75 (42%)
Frame = -3
Query: 270 LVGGDRLLTCCTWSSSLTRSIGATAVLETAAEIPPARKSLANATGSARFDILFDYVIFTR 91
L+GG +T + + + + A++PP R + + + FD+ + + +R
Sbjct: 307 LIGGHATVTKAIKDCVTCKKLRGRPLEQRMADLPPDRTEVCSPFTNVGFDVFGPWSVKSR 366
Query: 90 *ICRGGSCGTRGWGI 46
RG + WG+
Sbjct: 367 -KTRGAIANAKRWGL 380
>SB_32989| Best HMM Match : Umbravirus_LDM (HMM E-Value=3.4)
Length = 279
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/75 (20%), Positives = 32/75 (42%)
Frame = -3
Query: 270 LVGGDRLLTCCTWSSSLTRSIGATAVLETAAEIPPARKSLANATGSARFDILFDYVIFTR 91
L+GG +T + + + + A++PP R + + + FD+ + + +R
Sbjct: 165 LIGGHATVTKAIKDCVTCKKLRGRPLEQRMADLPPDRTEVCSPFTNVGFDVFGPWSVKSR 224
Query: 90 *ICRGGSCGTRGWGI 46
RG + WG+
Sbjct: 225 -KTRGAIANAKRWGL 238
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 1 ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 111
+TPN LL + + R+P SA S YSPSE I+
Sbjct: 963 LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003
>SB_22460| Best HMM Match : CCT (HMM E-Value=4.4)
Length = 313
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/75 (20%), Positives = 32/75 (42%)
Frame = -3
Query: 270 LVGGDRLLTCCTWSSSLTRSIGATAVLETAAEIPPARKSLANATGSARFDILFDYVIFTR 91
L+GG +T + + + + A++PP R + + + FD+ + + +R
Sbjct: 199 LIGGHATVTKAIKDCVTCKKLRGRPLEQRMADLPPDRTEVCSPFTNVGFDVFGPWSVKSR 258
Query: 90 *ICRGGSCGTRGWGI 46
RG + WG+
Sbjct: 259 -KTRGAIANAKRWGL 272
>SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029)
Length = 846
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/75 (20%), Positives = 32/75 (42%)
Frame = -3
Query: 270 LVGGDRLLTCCTWSSSLTRSIGATAVLETAAEIPPARKSLANATGSARFDILFDYVIFTR 91
L+GG +T + + + + A++PP R + + + FD+ + + +R
Sbjct: 517 LIGGHATVTKAIKDCVTCKKLRGRPLEQRMADLPPDRTEVCSPFTNVGFDVFGPWSVKSR 576
Query: 90 *ICRGGSCGTRGWGI 46
RG + WG+
Sbjct: 577 -KTRGAIANAKRWGL 590
>SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 289 RRYPCNAGRRRSLADVLYLEQQLDTLDW 206
R+ PCN GRR LA L++E W
Sbjct: 174 RKIPCNCGRRHLLA--LHVEDHFSKYSW 199
>SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 289 RRYPCNAGRRRSLADVLYLEQQLDTLDW 206
R+ PCN GRR LA L++E W
Sbjct: 174 RKIPCNCGRRHLLA--LHVEDHFSKYSW 199
>SB_55367| Best HMM Match : Granulin (HMM E-Value=0.00023)
Length = 565
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 261 RRPALQGYRRRLRPHPQ 311
RRP LQ R+R+RP PQ
Sbjct: 429 RRPGLQRDRKRMRPGPQ 445
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,925,807
Number of Sequences: 59808
Number of extensions: 291004
Number of successful extensions: 1035
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1038380485
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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