Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20663
(488 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 121 4e-30
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 121 4e-30
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 1.3
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 3.1
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 7.0
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 21 9.3
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 121 bits (292), Expect = 4e-30
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +1
Query: 256 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVD 435
I+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVD
Sbjct: 47 ISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVD 106
Query: 436 KKT 444
K T
Sbjct: 107 KNT 109
Score = 83.8 bits (198), Expect = 9e-19
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +2
Query: 119 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 253
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SK
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISK 45
Score = 29.1 bits (62), Expect = 0.027
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 447 FWRYFAGNLASGGA 488
F RYF GNLASGGA
Sbjct: 111 FLRYFVGNLASGGA 124
Score = 25.8 bits (54), Expect = 0.25
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 363
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.4 bits (43), Expect = 5.3
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 265 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 402
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 121 bits (292), Expect = 4e-30
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +1
Query: 256 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVD 435
I+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVD
Sbjct: 47 ISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVD 106
Query: 436 KKT 444
K T
Sbjct: 107 KNT 109
Score = 83.8 bits (198), Expect = 9e-19
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +2
Query: 119 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 253
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SK
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISK 45
Score = 29.1 bits (62), Expect = 0.027
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 447 FWRYFAGNLASGGA 488
F RYF GNLASGGA
Sbjct: 111 FLRYFVGNLASGGA 124
Score = 25.8 bits (54), Expect = 0.25
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 274 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 363
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.4 bits (43), Expect = 5.3
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 265 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 402
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 487 APPEARLPAK*RQNASSCQR-RRGT 416
APP +LP N ++C R +RGT
Sbjct: 1647 APPNRKLPPVPGSNYNTCDRIKRGT 1671
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 22.2 bits (45), Expect = 3.1
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 232 PSTARQQAIAADQRYKGI-VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 408
P Q DQ+Y+ + V+ + ++ KEQG +S G + P +N + +
Sbjct: 655 PVIPEQSLTYQDQQYQVVSVEQYQQL-KEQGQISQVGGGIQQNVEVLPENLVNAQQQVQA 713
Query: 409 KQVFLGGVDKKTHSGVTSLVIWPPV 483
+ + + K H + I PV
Sbjct: 714 VRNYYANLYTKYHGQYPNTQIQNPV 738
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.0 bits (42), Expect = 7.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 44 VIPHPRVPQLPPRHIHLVKIT 106
+I P +LPP H H +T
Sbjct: 92 IITIPPTRKLPPLHPHTAMVT 112
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 319 PAPWGCGRRRRR 284
P P GC RRR R
Sbjct: 1 PGPNGCPRRRGR 12
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,533
Number of Sequences: 438
Number of extensions: 2575
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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