Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20662
(766 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 159 3e-41
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 159 3e-41
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 159 bits (386), Expect = 3e-41
Identities = 70/84 (83%), Positives = 79/84 (94%)
Frame = +1
Query: 511 FVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 690
FVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA
Sbjct: 132 FVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRA 191
Query: 691 SYFGFYDTARGMLPDPKNTPIVIN 762
+YFGFYDTARGMLPDPK TP +I+
Sbjct: 192 AYFGFYDTARGMLPDPKKTPFLIS 215
Score = 133 bits (322), Expect = 1e-33
Identities = 58/71 (81%), Positives = 65/71 (91%)
Frame = +2
Query: 251 QEIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 430
++I+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGG
Sbjct: 45 KQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGG 104
Query: 431 VDKKTQFWRYF 463
VDK TQF RYF
Sbjct: 105 VDKNTQFLRYF 115
Score = 83.8 bits (198), Expect = 2e-18
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +3
Query: 120 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 254
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SK
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISK 45
Score = 27.9 bits (59), Expect = 0.11
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 502 LSGFV-YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 651
++G V YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 225 VAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 25.8 bits (54), Expect = 0.44
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 275 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 364
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 574 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 711
++ + G+ +C +I K G + +RG +V +A F F D
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKD 95
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 266 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 403
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 159 bits (386), Expect = 3e-41
Identities = 70/84 (83%), Positives = 79/84 (94%)
Frame = +1
Query: 511 FVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 690
FVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGFGVSVQGIIIYRA
Sbjct: 132 FVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRA 191
Query: 691 SYFGFYDTARGMLPDPKNTPIVIN 762
+YFGFYDTARGMLPDPK TP +I+
Sbjct: 192 AYFGFYDTARGMLPDPKKTPFLIS 215
Score = 133 bits (322), Expect = 1e-33
Identities = 58/71 (81%), Positives = 65/71 (91%)
Frame = +2
Query: 251 QEIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 430
++I+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGG
Sbjct: 45 KQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGG 104
Query: 431 VDKKTQFWRYF 463
VDK TQF RYF
Sbjct: 105 VDKNTQFLRYF 115
Score = 83.8 bits (198), Expect = 2e-18
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = +3
Query: 120 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 254
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SK
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISK 45
Score = 27.9 bits (59), Expect = 0.11
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 502 LSGFV-YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 651
++G V YP D R R+ G+ + + +C + I+K++G ++G
Sbjct: 225 VAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275
Score = 25.8 bits (54), Expect = 0.44
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 275 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 364
YK + + I K +G +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 574 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 711
++ + G+ +C +I K G + +RG +V +A F F D
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKD 95
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +2
Query: 266 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 403
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,964
Number of Sequences: 438
Number of extensions: 3889
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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