Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20660
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   0.99 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   1.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   2.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.2  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 153 AGFLGSTATRTTGDTLNFITFMLWAFLKVVIVPVLTK 43
           +GF     T    D  N++TF    F+ V++  +L K
Sbjct: 32  SGFENFVKTYLVSDFENYVTFFCSLFIVVILKLILAK 68


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 528 YDVTEARKIWCFGPEGTPQHPGRLLQRS 611
           Y++    K+W F  + +  +P R LQ++
Sbjct: 411 YEIRHKFKLWNFNNQISDDNPARFLQKA 438


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 601 SKGVQYLNEIKDSVVAGFQ 657
           SK ++Y+N + D  VAGF+
Sbjct: 183 SKIIEYMNHLVDLGVAGFR 201


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 601 SKGVQYLNEIKDSVVAGFQ 657
           SK ++Y+N + D  VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 601 SKGVQYLNEIKDSVVAGFQ 657
           SK ++Y+N + D  VAGF+
Sbjct: 184 SKIIEYMNHLVDLGVAGFR 202


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 152 ADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAG 253
           AD  KLV GL    +S  +    N + G  IVAG
Sbjct: 255 ADPGKLVLGLGVYGRSFTLASASNNKLGAPIVAG 288


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 335 TGSDFLIGMQAWSSSRSLRQISRWS 261
           TG +        + S SLR  SRWS
Sbjct: 345 TGGNSASNSSGDAQSTSLRPFSRWS 369


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 116 PVVRVAVEPKNPADLPKLV 172
           PV+R+ V   NP D   L+
Sbjct: 480 PVMRICVSAWNPKDCDPLI 498


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,573
Number of Sequences: 336
Number of extensions: 3693
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)