Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20660
(674 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 163 3e-41
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 163 3e-41
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 81 1e-16
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 69 8e-13
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 33 0.050
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.27
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 29 0.46
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 29 0.81
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 28 1.1
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 28 1.4
SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone oxidase|Schizosacch... 28 1.4
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 27 1.9
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 1.9
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 3.3
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 26 4.3
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 4.3
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 25 7.6
SPAC17A5.06 |ptr8||transcription factor TFIIH complex ERCC-3 sub... 25 10.0
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 25 10.0
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 25 10.0
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 163 bits (395), Expect = 3e-41
Identities = 81/140 (57%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPM 435
GELHLEICLKDL+EDHA IP+K S PVVSYRE+V+E S LSKSPNKHNR+FM A+PM
Sbjct: 534 GELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPM 593
Query: 436 PDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAP-RVRPNILVDCSKGV 612
+ L I+ G VNPRDDFK RAR + + + P N++VD +K V
Sbjct: 594 SEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAV 653
Query: 613 QYLNEIKDSVVAGFQWAAKE 672
YLNEIKDSVVA F WA+KE
Sbjct: 654 AYLNEIKDSVVAAFAWASKE 673
Score = 137 bits (332), Expect = 1e-33
Identities = 67/84 (79%), Positives = 73/84 (86%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 181
P+GNI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV+VAVE KN DLPKLVEGL
Sbjct: 449 PAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGL 508
Query: 182 KRLAKSDPMVQCINEESGEHIVAG 253
KRL+KSDP V C ESGEHIVAG
Sbjct: 509 KRLSKSDPCVLCTTSESGEHIVAG 532
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 163 bits (395), Expect = 3e-41
Identities = 81/140 (57%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPM 435
GELHLEICLKDL+EDHA IP+K S PVVSYRE+V+E S LSKSPNKHNR+FM A+PM
Sbjct: 534 GELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPM 593
Query: 436 PDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAP-RVRPNILVDCSKGV 612
+ L I+ G VNPRDDFK RAR + + + P N++VD +K V
Sbjct: 594 SEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAV 653
Query: 613 QYLNEIKDSVVAGFQWAAKE 672
YLNEIKDSVVA F WA+KE
Sbjct: 654 AYLNEIKDSVVAAFAWASKE 673
Score = 137 bits (332), Expect = 1e-33
Identities = 67/84 (79%), Positives = 73/84 (86%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 181
P+GNI GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSPVV+VAVE KN DLPKLVEGL
Sbjct: 449 PAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGL 508
Query: 182 KRLAKSDPMVQCINEESGEHIVAG 253
KRL+KSDP V C ESGEHIVAG
Sbjct: 509 KRLSKSDPCVLCTTSESGEHIVAG 532
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 81.4 bits (192), Expect = 1e-16
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPM 435
GE++++ L DL ++ I I+ SDPV + ET + S C S +PNK NR+ M +P+
Sbjct: 646 GEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPL 705
Query: 436 PDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAPRVR-PNILVDCSKGV 612
G+ DI+ G+VN K + F QK+ + L A P R NIL D +
Sbjct: 706 EKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRDDTLST 765
Query: 613 ----QYLNEIKDSVVAGFQWAAKE 672
LN +K+ + GFQW +E
Sbjct: 766 DVDKNVLNSVKEYIKQGFQWGTRE 789
Score = 57.6 bits (133), Expect = 2e-09
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Frame = +2
Query: 5 SGNICGLVGVDQFLVKTGTITTFK---NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVE 175
+G + L GVD + KT TI + + + + + V +VAVEP NP++LPKL++
Sbjct: 559 AGMLVLLGGVDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLD 618
Query: 176 GLKRLAKSDPMVQCINEESGEHIVAG 253
GL++ KS P+ EESGEH + G
Sbjct: 619 GLRKTNKSYPLSITKVEESGEHTIFG 644
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 68.5 bits (160), Expect = 8e-13
Identities = 31/82 (37%), Positives = 52/82 (63%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 181
P+GN+ + G+ +++T T+ + N N+ + + P+VRVA+EP P ++ KLV GL
Sbjct: 524 PAGNVFAIGGLAGTVLRTATLCSSPNGPNLVGVTQQMEPIVRVALEPVRPFEMNKLVTGL 583
Query: 182 KRLAKSDPMVQCINEESGEHIV 247
L ++DP VQ EE+GEH++
Sbjct: 584 DMLNQADPCVQIAVEENGEHVI 605
Score = 48.8 bits (111), Expect = 7e-07
Identities = 26/51 (50%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 241 HCRWC-GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSK 390
H C GE+HLE CLKDL E A I I+ S P+V YRET D L +K
Sbjct: 603 HVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPYRETTIATPDLLAKNK 653
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 32.7 bits (71), Expect = 0.050
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Frame = +2
Query: 5 SGNICGLVGVDQFLVKTGTIT----TFKNAHNMKVMKFSV----SPVVRVAVEPKNPADL 160
+GNI + G+ QF TG I KN H SV PV ++EP + D
Sbjct: 400 AGNIGVISGIKQF--HTGDIIINKENSKNFHEYLSGNQSVISIPEPVCIASIEPYSLKDE 457
Query: 161 PKLVEGLKRLAKSDPMVQCINE-ESGEHIVAGV 256
P L+E L + + DP + + E+G+ ++ G+
Sbjct: 458 PALLEALANMNREDPSFRYTQDLENGQLLIQGM 490
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 30.3 bits (65), Expect = 0.27
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 280 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 438
+K LEE+ + +K SD V + ++ + P +++FM PMP
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMP 339
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 29.5 bits (63), Expect = 0.46
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 232 RRTHCRWCGELHLEIC 279
RR HCRWCG+L C
Sbjct: 45 RRHHCRWCGKLFCYNC 60
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 28.7 bits (61), Expect = 0.81
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 277 CLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGL 447
C++DL++ + K+SD Y T+ ++KS KHN+L K +P+P L
Sbjct: 214 CVRDLKKLEKKVK-KRSDLGNKYESTLNS-----LINKSVKKHNKLVKKHKPLPSTL 264
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 149 PADLPKLVEGLKRLAKSD--PMVQCINE 226
P D+ KL EGL++L + D +VQ +NE
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVVQMVNE 199
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 26 VGVDQFLVKTGTITTFKNAHNMKV--MKFSVSP 118
+GVD F K G + +K+ N+K+ +K+ V+P
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLLSLKYDVTP 436
>SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone
oxidase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -3
Query: 558 TKSYGLR*HRIRTFL*EPSASLEVIAGIYATLINVLWQTIRHGLSLHEQTV 406
T G+R ++++ L SL ++ I T ++ + T HG SL Q +
Sbjct: 93 TVQAGIRFYQVQEILQNLGYSLPIVGSISETSVSGIMSTCTHGSSLQHQVL 143
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 27.5 bits (58), Expect = 1.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 232 RRTHCRWCGELHLEICLKD 288
R+ HCR CG++ + CLK+
Sbjct: 78 RKHHCRICGKIICKYCLKE 96
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 271 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK 402
E+C +LE+D I +S +S + A++ DQL S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 35 DQFLVKTGTITTFKNAHNMKVMKFSVSPVV 124
D FLVK G + ++ +N+ FSVS +V
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVSDLV 111
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 445 LPEDIDEGRVNPRDDFKT 498
LPE IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -3
Query: 447 QTIRHGLSLHEQTVVLVGRL*E 382
+++RH +SL+E+T + +GRL E
Sbjct: 324 ESVRHLISLNEETWIQIGRLAE 345
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 232 RRTHCRWCGELHLEICLKDL 291
RR HCR CG + C+ ++
Sbjct: 293 RRRHCRLCGRVICRFCVLEI 312
>SPAC17A5.06 |ptr8||transcription factor TFIIH complex ERCC-3
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 804
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 599 QSTRMLGRTLGAKAPNLTGFGNIVFVLFCKNRARVLKSSR 480
Q + LGR L AK N GF + L K+ + SS+
Sbjct: 644 QEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYSSK 683
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 25.0 bits (52), Expect = 10.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 604 WSNRPGCWGVPSGPKH 557
W PGC GV S P H
Sbjct: 282 WEKLPGCEGVRSFPSH 297
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.0 bits (52), Expect = 10.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 346 RETVAEESDQLCLSKSPNKHNRLFMKAQP 432
R T EE + L+KSP+ HNR+ P
Sbjct: 466 RLTDDEEREIRALAKSPDIHNRIIASMAP 494
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,915,170
Number of Sequences: 5004
Number of extensions: 60368
Number of successful extensions: 198
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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