Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20660
(674 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 165 2e-41
04_01_0103 + 1082077-1082167,1083037-1085477 158 4e-39
02_04_0017 + 18937774-18937864,18938505-18940945 158 4e-39
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 136 1e-32
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 99 3e-21
03_05_0511 + 25056018-25059107 79 4e-15
02_04_0148 - 20198407-20201424 75 4e-14
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 44 1e-04
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 33 0.28
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 31 1.1
12_02_0932 + 24519204-24519380,24520074-24520128,24520251-245222... 30 1.5
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 29 2.6
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164... 29 3.4
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 29 4.5
07_03_0902 - 22435692-22436156,22436684-22436923,22437228-224373... 29 4.5
12_02_1092 - 26011445-26012071,26012826-26014022,26014083-260142... 28 7.8
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 28 7.8
07_01_0244 + 1786009-1788048 28 7.8
01_06_0378 - 28869648-28869710,28869856-28870365 28 7.8
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 165 bits (402), Expect = 2e-41
Identities = 84/141 (59%), Positives = 100/141 (70%), Gaps = 2/141 (1%)
Frame = +1
Query: 256 GELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQP 432
GELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPNKHNRL+M+A+P
Sbjct: 530 GELHLEICLKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARP 589
Query: 433 MPDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAPRVR-PNILVDCSKG 609
M +GLPE IDEGR+ PRDD K R++ L + + P PNI+VD KG
Sbjct: 590 MEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNIVVDMCKG 649
Query: 610 VQYLNEIKDSVVAGFQWAAKE 672
VQYLNEIKDSVVAGFQWA+KE
Sbjct: 650 VQYLNEIKDSVVAGFQWASKE 670
Score = 111 bits (268), Expect = 4e-25
Identities = 57/86 (66%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVE 175
P GN +VG+DQF+ K T+T K +A +K MKFSVSPVVRVAV+ K +DLPKLVE
Sbjct: 443 PCGNTVAMVGLDQFITKNATLTNEKEVDACPIKAMKFSVSPVVRVAVQCKVASDLPKLVE 502
Query: 176 GLKRLAKSDPMVQCINEESGEHIVAG 253
GLKRLAKSDPMV C EESGEHI+AG
Sbjct: 503 GLKRLAKSDPMVLCTVEESGEHIIAG 528
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 158 bits (383), Expect = 4e-39
Identities = 80/141 (56%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
Frame = +1
Query: 256 GELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQP 432
GELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPNKHNRL+M+A+P
Sbjct: 534 GELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARP 593
Query: 433 MPDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAPRVR-PNILVDCSKG 609
+ +GL E ID+GR+ PRDD K R++ L + + P PN++VD KG
Sbjct: 594 LEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKG 653
Query: 610 VQYLNEIKDSVVAGFQWAAKE 672
VQYLNEIKDSVVAGFQWA+KE
Sbjct: 654 VQYLNEIKDSVVAGFQWASKE 674
Score = 111 bits (266), Expect = 6e-25
Identities = 56/86 (65%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTFKNAHN--MKVMKFSVSPVVRVAVEPKNPADLPKLVE 175
P GN +VG+DQF+ K T+T K A ++ MKFSVSPVVRVAV+ K +DLPKLVE
Sbjct: 447 PCGNTVAMVGLDQFITKNATLTNEKEADACPIRAMKFSVSPVVRVAVQCKVASDLPKLVE 506
Query: 176 GLKRLAKSDPMVQCINEESGEHIVAG 253
GLKRLAKSDPMV C EESGEHI+AG
Sbjct: 507 GLKRLAKSDPMVLCTIEESGEHIIAG 532
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 158 bits (383), Expect = 4e-39
Identities = 80/141 (56%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
Frame = +1
Query: 256 GELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQP 432
GELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPNKHNRL+M+A+P
Sbjct: 534 GELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARP 593
Query: 433 MPDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAPRVR-PNILVDCSKG 609
+ +GL E ID+GR+ PRDD K R++ L + + P PN++VD KG
Sbjct: 594 LEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKG 653
Query: 610 VQYLNEIKDSVVAGFQWAAKE 672
VQYLNEIKDSVVAGFQWA+KE
Sbjct: 654 VQYLNEIKDSVVAGFQWASKE 674
Score = 110 bits (265), Expect = 9e-25
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVE 175
P GN +VG+DQF+ K T+T K +A ++ MKFSVSPVVRVAV+ K +DLPKLVE
Sbjct: 447 PCGNTVAMVGLDQFITKNATLTNEKESDACPIRAMKFSVSPVVRVAVQCKVASDLPKLVE 506
Query: 176 GLKRLAKSDPMVQCINEESGEHIVAG 253
GLKRLAKSDPMV C EESGEHI+AG
Sbjct: 507 GLKRLAKSDPMVLCTIEESGEHIIAG 532
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 136 bits (330), Expect = 1e-32
Identities = 72/149 (48%), Positives = 97/149 (65%), Gaps = 10/149 (6%)
Frame = +1
Query: 256 GELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQP 432
G+LHLEIC+KDL+ED I P+++YRETV + S + +SKSPNKHNRL+M+A+P
Sbjct: 536 GQLHLEICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKSPNKHNRLYMEARP 595
Query: 433 MP-DGLPED-------IDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAPRVR-PN 585
+ + L +D ID+ R+ P+DD K R + L + + A P + PN
Sbjct: 596 LDKEDLQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDKDLAKKIWAFGPETKGPN 655
Query: 586 ILVDCSKGVQYLNEIKDSVVAGFQWAAKE 672
+LVD KGVQYL+EIKDSVVAGFQWA+KE
Sbjct: 656 LLVDMCKGVQYLSEIKDSVVAGFQWASKE 684
Score = 113 bits (271), Expect = 2e-25
Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVE 175
P GN +VG+DQF+ K T+T K +AH +K MKFSVSPVVR +V KN ++LPKLVE
Sbjct: 449 PCGNTVAMVGLDQFITKNATLTDEKAVDAHPIKAMKFSVSPVVRKSVACKNASELPKLVE 508
Query: 176 GLKRLAKSDPMVQCINEESGEHIVAGV 256
GLKRLAKSDP+V C EESGEH++AGV
Sbjct: 509 GLKRLAKSDPLVVCTIEESGEHVIAGV 535
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 99.1 bits (236), Expect = 3e-21
Identities = 54/144 (37%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPM 435
GEL+L+ +KDL E ++ + +K +DPVV++ ETV + S C +++PNK N++ M A+P+
Sbjct: 657 GELYLDSIMKDLRELYSEVEVKVADPVVTFCETVVDTSSMKCFAETPNKRNKITMVAEPL 716
Query: 436 PDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAPRVR-PNILVDCSKGV 612
GL EDI+ G V+ K F ++ + A P + PNIL+D + V
Sbjct: 717 EKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPEKQGPNILLDDTLSV 776
Query: 613 Q----YLNEIKDSVVAGFQWAAKE 672
+ LN +KDS+V GFQW A+E
Sbjct: 777 EVDKNLLNAVKDSIVQGFQWGARE 800
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTFK---NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLV 172
P+G+ + GVD ++KT TI K + + + ++F+ PVV++A EP NP++LPK+V
Sbjct: 569 PAGSWVLIEGVDASIMKTATICPMKMDEDVYIFRPLRFNTLPVVKIAAEPLNPSELPKMV 628
Query: 173 EGLKRLAKSDPMVQCINEESGEHIVAG 253
EGL++++KS P+ EESGEH + G
Sbjct: 629 EGLRKISKSYPLAVTKVEESGEHTILG 655
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/82 (41%), Positives = 55/82 (67%)
Frame = +2
Query: 5 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLK 184
+GN+ + G+ ++K+ T+++ KN M F VSP+++VA+EP NPADL LV+GLK
Sbjct: 499 AGNVVAIQGLGHHILKSATLSSTKNCWPFSSMMFQVSPMLKVAIEPSNPADLGALVKGLK 558
Query: 185 RLAKSDPMVQCINEESGEHIVA 250
L ++DP V+ + GEH++A
Sbjct: 559 LLNRADPFVEYTVSQRGEHVLA 580
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLS-KSPNK 402
GE+HLE C KDLEE A + + SDP+VS++ET+ E L S K+P +
Sbjct: 583 GEIHLERCKKDLEERFAKVKLVVSDPLVSFKETIEGEGLALIESLKAPRE 632
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/82 (39%), Positives = 54/82 (65%)
Frame = +2
Query: 5 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLK 184
+G++ + G+ ++K T+++ KN M F VSP+++VA+EP NP+DL LV+GLK
Sbjct: 479 AGDVLAIEGLGHHVLKNATLSSTKNCQPFSGMMFQVSPMLKVAIEPSNPSDLGALVKGLK 538
Query: 185 RLAKSDPMVQCINEESGEHIVA 250
L ++DP ++ E GEH++A
Sbjct: 539 LLNQADPFIEYTVSERGEHVLA 560
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 366
GE+HLE C+K+L+E A + ++ S P+VS+++T+ E
Sbjct: 563 GEIHLEHCIKNLQERFARVQLEVSKPLVSFKDTIQGE 599
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 SGNICGLVGVDQFLVKTG-TITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 181
+G+I L G+ + TG T++ ++ M+F PV++VA+EPK AD K+ GL
Sbjct: 422 AGDIVALAGLKDTI--TGETLSDPDKPVVLERMEFP-DPVIKVAIEPKTKADADKMATGL 478
Query: 182 KRLAKSDPMVQ-CINEESGEHIVAGV 256
+LA+ DP +EE+ + ++ G+
Sbjct: 479 IKLAQEDPSFHFSRDEETNQTVIEGM 504
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLK 184
+G I + GVD T T + M M PV+ +AV P + + + L
Sbjct: 443 AGQIVAVFGVD--CASGDTFTDGSVKYTMTSMNVP-EPVMSLAVSPISKDSGGQFSKALN 499
Query: 185 RLAKSDPMVQC-INEESGEHIVAGV 256
R K DP + ++ ESGE I++G+
Sbjct: 500 RFQKEDPTFRVGLDPESGETIISGM 524
>06_01_0993 +
7710016-7710977,7711081-7711316,7711422-7711501,
7711977-7712072,7712995-7713892,7713983-7714093,
7714657-7714751
Length = 825
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 288 ILKTDLKME-FSTPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSA 151
++ LK E FS P+ MCS +S HCT D R+RP +L R A
Sbjct: 516 VVSMALKREQFSIPS-MCS-ESFSSHCTKSQDSVVRMRPDDTLVRRA 560
>12_02_0932 +
24519204-24519380,24520074-24520128,24520251-24522202,
24522288-24522446,24522878-24523049,24523131-24523429,
24524037-24524285
Length = 1020
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 235 RTHCRWCGELHLEICLKDLEEDHACIPIKK--SDPVVSYRETVAEES-DQLCL 384
R HC+ E+ L C K ++E A +P+ K +D + E+ A E+ LCL
Sbjct: 577 RAHCKGASEIVLAACDKFMDETGAVVPLDKTTADKLNGIIESFANEALRTLCL 629
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 232 RRTHCRWCGELHLEICLKDLEEDHACIPIKKSDPVVSYRE-TVAEESDQLCLSKSPNKHN 408
RR HCR CGE+ + C + + + + P+V + +AE S +L +++ +
Sbjct: 388 RRHHCRNCGEIFCDKC----SQGRTALTAEDNAPLVRVCDRCMAEVSQRLSIAQEAANRS 443
Query: 409 RLFMKAQPMPDGLPEDIDEGR 471
+ + L E+++ R
Sbjct: 444 ATVQSHEDLARKLKEEMERNR 464
>01_07_0303 +
42615578-42615709,42616273-42616312,42616393-42616477,
42616634-42616813,42618274-42618354,42618890-42619011,
42619867-42620723,42621656-42621897,42622107-42622200,
42622306-42622476,42622695-42622740,42624101-42624111,
42624141-42624392
Length = 770
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/85 (24%), Positives = 33/85 (38%)
Frame = +2
Query: 5 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLK 184
+G+ L G ++ TG T + N+ + K P +R +PKN + + GL
Sbjct: 271 TGSATILTGDQPVIIYTGADTEKRQVQNIVLPKNRSDPYLREWTKPKNNPLIEPVGPGLN 330
Query: 185 RLAKSDPMVQCINEESGEHIVAGVE 259
DP I + I G E
Sbjct: 331 SNQFRDPTTGWIGPDGLWRIAVGAE 355
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 364 ESDQLCLSKSPNKHNRLFMKAQPMPDGLPE 453
E + LCL PN+H + + A+ +P LPE
Sbjct: 42 EKENLCLYGFPNEHWEVNLPAEEVPPELPE 71
>07_03_0902 -
22435692-22436156,22436684-22436923,22437228-22437349,
22437441-22437587,22437753-22437882,22437981-22438116,
22438223-22438428,22438644-22438844,22438999-22439157,
22439781-22439858,22440453-22440542,22440625-22440777,
22440873-22440991,22441190-22441328,22441422-22441525,
22441944-22441989,22442087-22442252,22442356-22442383,
22442460-22442610,22442686-22442829,22442912-22443013,
22443566-22444093
Length = 1217
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 477 SPR*LQDSRSVLTEKYEYDVTEARKIWCFGPEGT 578
SPR + + V T+ +Y + + ++WC P+ T
Sbjct: 155 SPRTKTNGKPVFTDTMDYVLQKKLRVWCSSPDAT 188
>12_02_1092 - 26011445-26012071,26012826-26014022,26014083-26014286,
26014316-26014385,26014440-26014479,26015566-26015632,
26015718-26015740,26017985-26018081,26018553-26018614,
26018913-26019297,26019924-26020007,26020383-26020467,
26020579-26020790,26020881-26021030
Length = 1100
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 601 SNRPGCWGVPSGPKHQILRASVTSYSYFSVRTERES*SHRGDLR 470
S GCW + ++Q LR + S + ERE R D+R
Sbjct: 974 SGEAGCWATAAVRENQALRVGMDSMRLRLMELERECSDMRQDIR 1017
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 454 DIDEGRVNPRDDFKTRARFLQKSTNTMLP 540
D GR P+++ + FLQ+ TNT+ P
Sbjct: 269 DGSSGRFTPKNNASMHSTFLQEGTNTLSP 297
>07_01_0244 + 1786009-1788048
Length = 679
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 438 RHGLSLHEQTVVLVGRL*ETELVRFLSY 355
RHG++ ++++GRL LVR L Y
Sbjct: 397 RHGMTQFTAEIIILGRLRHRNLVRLLGY 424
>01_06_0378 - 28869648-28869710,28869856-28870365
Length = 190
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -3
Query: 555 KSYGLR*HRIRTFL*EPSASLEVIAGIYATLINVLWQ 445
++YG+ +R FL P+A+L+ +AG A ++ V W+
Sbjct: 110 RTYGIIKRALRRFL--PAAALKFVAGAAAVVVYVEWR 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,829,435
Number of Sequences: 37544
Number of extensions: 432878
Number of successful extensions: 1243
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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