Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20660
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 200 1e-51
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 196 9e-51
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 81 9e-16
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 77 9e-15
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.004
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 33 0.25
AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical ... 31 0.57
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 29 2.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.0
Z81462-2|CAB03841.1| 263|Caenorhabditis elegans Hypothetical pr... 27 9.2
U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical pr... 27 9.2
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 200 bits (487), Expect = 1e-51
Identities = 94/140 (67%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPM 435
GELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL AQPM
Sbjct: 544 GELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPM 603
Query: 436 PDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAP-RVRPNILVDCSKGV 612
PDGL +DI+ G VN RD+FK RA+ L + + + + P PN+L+D +KGV
Sbjct: 604 PDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGV 663
Query: 613 QYLNEIKDSVVAGFQWAAKE 672
QYLNEIKDSVVAGFQWA +E
Sbjct: 664 QYLNEIKDSVVAGFQWATRE 683
Score = 158 bits (384), Expect = 3e-39
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 181
PSGNI GLVGVDQ+LVK GTITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGL
Sbjct: 459 PSGNIAGLVGVDQYLVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGL 518
Query: 182 KRLAKSDPMVQCINEESGEHIVAG 253
KRLAKSDPMVQCI EESGEHI+AG
Sbjct: 519 KRLAKSDPMVQCIFEESGEHIIAG 542
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 196 bits (479), Expect = 9e-51
Identities = 92/140 (65%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPM 435
GELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+CLSKSPNKHNRL AQPM
Sbjct: 544 GELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPM 603
Query: 436 PDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAP-RVRPNILVDCSKGV 612
PDGL +DI+ G V+ RD+FK RA++ + + + + P PN+L+D +KGV
Sbjct: 604 PDGLADDIEGGTVSARDEFKARAKYPGEKYEYAVTEARKIWCFGPDGTGPNLLMDVTKGV 663
Query: 613 QYLNEIKDSVVAGFQWAAKE 672
QYLNEIKDSVVAGFQWA +E
Sbjct: 664 QYLNEIKDSVVAGFQWATRE 683
Score = 158 bits (384), Expect = 3e-39
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 181
PSGNI GLVGVDQ+LVK GTITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGL
Sbjct: 459 PSGNIAGLVGVDQYLVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGL 518
Query: 182 KRLAKSDPMVQCINEESGEHIVAG 253
KRLAKSDPMVQCI EESGEHI+AG
Sbjct: 519 KRLAKSDPMVQCIFEESGEHIIAG 542
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 80.6 bits (190), Expect = 9e-16
Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPM 435
GE +++ + D+ + + I IK +DPVV++ ETV E S C +++PNK N++ M A+P+
Sbjct: 637 GEFYMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPL 696
Query: 436 PDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALAP-RVRPNILVD----C 600
L EDI+ V + + F Q N L A P PNIL+D
Sbjct: 697 EKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGPDTTGPNILLDDTLPS 756
Query: 601 SKGVQYLNEIKDSVVAGFQWAAKE 672
L+ +++S+V GFQWA +E
Sbjct: 757 EVDKHLLSTVRESLVQGFQWATRE 780
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/87 (39%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLV 172
P+G + G+DQ +VKT TI ++ + + +KF+ V++AVEP NP++LPK++
Sbjct: 549 PAGCWVLIEGIDQPIVKTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKML 608
Query: 173 EGLKRLAKSDPMVQCINEESGEHIVAG 253
+GL+++ KS P++ EESGEH++ G
Sbjct: 609 DGLRKVNKSYPLLTTRVEESGEHVLLG 635
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 77.4 bits (182), Expect = 9e-15
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPM 435
GE +++ + D+ + + I IK +DPVV++ ETV E S C +++PNK N++ M A+P+
Sbjct: 512 GEFYMDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPL 571
Query: 436 PDGLPEDIDEGRVNPRDDFKTRARFLQKSTNTMLPKPVRFGALA-PRVRPNILVD----C 600
L EDI+ V + + F Q N L A PNIL+D
Sbjct: 572 EKQLDEDIENEVVQIGWNRRRLGEFFQTKYNWDLLAARSIWAFGLDTTGPNILLDDTLPS 631
Query: 601 SKGVQYLNEIKDSVVAGFQWAAKE 672
L+ +++S+V GFQWA +E
Sbjct: 632 EVDKHLLSTVRESLVQGFQWATRE 655
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/87 (39%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Frame = +2
Query: 2 PSGNICGLVGVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLV 172
P+G + G+DQ +VKT TI ++ + + +KF+ V++AVEP NP++LPK++
Sbjct: 424 PAGCWVLIEGIDQPIVKTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKML 483
Query: 173 EGLKRLAKSDPMVQCINEESGEHIVAG 253
+GL+++ KS P++ EESGEH++ G
Sbjct: 484 DGLRKVNKSYPLLTTRVEESGEHVLLG 510
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 SGNICGLVGVDQFLVKTGTITTFKN-AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGL 181
+G+IC G+D +T +T +N A + + M PV+ +A++P N D ++ L
Sbjct: 411 AGDICATFGLDCHSGET--FSTDQNLAPHCESMHIP-EPVISMAIKPVNRKDADNFIKAL 467
Query: 182 KRLAKSDPMVQC-INEESGEHIVAGV 256
R K DP + N+E+ E IV+G+
Sbjct: 468 TRFTKEDPTFRREYNQEAKETIVSGM 493
Score = 34.3 bits (75), Expect = 0.081
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPM 435
GELHLEI + ++ ++ C P++ P V+YRE + K F + + +
Sbjct: 494 GELHLEIYAQRMKSEYNC-PVELGKPTVAYRECLGSPYKFHFRHKKQTGGQGQFGEIEGV 552
Query: 436 PDGLPED 456
D LP D
Sbjct: 553 IDPLPSD 559
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 369
GE+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 523 GEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETVIEDS 559
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +2
Query: 5 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLK 184
SG IC + + L++ T+ + +K+ + +VRV++ + D+ L E LK
Sbjct: 441 SGMICTIDA--EILLQNTTLCEKPDFPCLKIGSQTGEALVRVSISTQQLDDMDDLREKLK 498
Query: 185 RLAKSDPMVQCINEESGE 238
LA D ++ + E+GE
Sbjct: 499 LLALLDTSLKVMELENGE 516
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 256 GELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 369
GE+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 523 GEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETVIEDS 559
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +2
Query: 5 SGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLK 184
SG IC + + L++ T+ + +K+ + +VRV++ + D+ L E LK
Sbjct: 441 SGMICTIDA--EILLQNTTLCEKPDFPCLKIGSQTGEALVRVSISTQQLDDMDDLREKLK 498
Query: 185 RLAKSDPMVQCINEESGE 238
LA D ++ + E+GE
Sbjct: 499 LLALLDTSLKVMELENGE 516
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 304 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPR 483
AC+PI VS E ++ES+ K +K + +KA + DG+P D D+G +
Sbjct: 228 ACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDGSDEHQ 286
Query: 484 DDFKT 498
D KT
Sbjct: 287 CDCKT 291
>AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical
protein Y42H9AR.3 protein.
Length = 563
Score = 31.5 bits (68), Expect = 0.57
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = +1
Query: 232 RRTHCRWCGELHLEICLKDLEEDHACIPIKKSDPV----VSYRETVAEESDQLCLSKSPN 399
RR HCR CG + C K L D A S+P+ + E E++Q L N
Sbjct: 197 RRHHCRLCGRVLCHSCSKFLSFDTAKTLTSSSNPLGDTHIIVEEPNTVENEQELLQPEEN 256
Query: 400 KHNRLFMKAQPMPD 441
F +Q D
Sbjct: 257 GRRSFFSLSQKSMD 270
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 80 AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSD 202
A + F +P V V + NP L +L+E ++++ K +
Sbjct: 71 AQGKTTITFQTTPAVMVCISKANPEALAQLIEAIRKIVKGE 111
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 213 CTMGSDLARRLRPSTSLGRS 154
C MGS+ A+RLRP + GRS
Sbjct: 202 CVMGSEDAQRLRPDRAFGRS 221
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 177 PSTSLGRSAGFLGSTATRTTGDTLN 103
PSTS G AGFL STA + G N
Sbjct: 142 PSTSSGLPAGFLNSTANSSVGANNN 166
>Z81462-2|CAB03841.1| 263|Caenorhabditis elegans Hypothetical
protein C04H5.2 protein.
Length = 263
Score = 27.5 bits (58), Expect = 9.2
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = +1
Query: 13 HLWSRWSRSVLSQDWYNHHFQECPQ 87
+LW+ W++ S +W+ + ++C Q
Sbjct: 188 YLWTTWAQGEPSANWWEYDIEDCLQ 212
>U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical
protein F10G2.1 protein.
Length = 201
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 379 CLSKSPNKHNRLFMKAQPMPDGLPEDIDE 465
C K NK++ + P PD + E+ DE
Sbjct: 116 CSEKLENKNSTCYQNWDPFPDAIDEETDE 144
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 313 PIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 441
P S+ V + R+T E+ Q ++K+P+ N ++ P+P+
Sbjct: 1626 PGPTSEHVATIRKTPVRETHQSSITKAPSLENVAKIRQSPVPE 1668
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,353,440
Number of Sequences: 27780
Number of extensions: 358290
Number of successful extensions: 1095
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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