Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20659
         (569 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010067-1|AAQ22536.1|  531|Drosophila melanogaster LD13361p pro...    30   2.5  
AE014298-781|AAF46072.2|  531|Drosophila melanogaster CG32758-PA...    30   2.5  
AY113332-1|AAM29337.1|  239|Drosophila melanogaster AT30415p pro...    29   4.4  
AE014298-1762|AAF48159.2|  239|Drosophila melanogaster CG2574-PA...    29   4.4  
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    29   4.4  

>BT010067-1|AAQ22536.1|  531|Drosophila melanogaster LD13361p
           protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
 Frame = -3

Query: 465 LPHPSNRNALLLHGRNRQGGGTYPRGLKSGPTNMRDRRVIYVFK-----HYNHRNRISTY 301
           LP P+  +A++       GGG    G+  G T     RV+ ++K      +N R ++S  
Sbjct: 10  LPTPTPASAVVTASSGGGGGGAVVMGVGVGVTTANGPRVVTIYKTETGFGFNVRGQVSEG 69

Query: 300 KFYRYINSYIY 268
              R IN  +Y
Sbjct: 70  GQLRSINGELY 80


>AE014298-781|AAF46072.2|  531|Drosophila melanogaster CG32758-PA
           protein.
          Length = 531

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
 Frame = -3

Query: 465 LPHPSNRNALLLHGRNRQGGGTYPRGLKSGPTNMRDRRVIYVFK-----HYNHRNRISTY 301
           LP P+  +A++       GGG    G+  G T     RV+ ++K      +N R ++S  
Sbjct: 10  LPTPTPASAVVTASSGGGGGGAVVMGVGVGVTTANGPRVVTIYKTETGFGFNVRGQVSEG 69

Query: 300 KFYRYINSYIY 268
              R IN  +Y
Sbjct: 70  GQLRSINGELY 80


>AY113332-1|AAM29337.1|  239|Drosophila melanogaster AT30415p
           protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 200 GCVVQIKSPLHELAKEPP 147
           GCVV+IKS L ++ K PP
Sbjct: 62  GCVVRIKSELQDIRKNPP 79


>AE014298-1762|AAF48159.2|  239|Drosophila melanogaster CG2574-PA
           protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 200 GCVVQIKSPLHELAKEPP 147
           GCVV+IKS L ++ K PP
Sbjct: 62  GCVVRIKSELQDIRKNPP 79


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
           protein.
          Length = 2898

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 366 MRDRRVIYVFKHYNHRNRISTYKFYRYINS 277
           M D   +YVF  Y+  N IST + YR+  S
Sbjct: 242 MEDEDALYVFGGYDLNNVISTLQIYRFSTS 271


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,209,599
Number of Sequences: 53049
Number of extensions: 541170
Number of successful extensions: 1147
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)