Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20657
(462 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B63A5 Cluster: PREDICTED: similar to conserved ... 34 1.3
UniRef50_Q9RJC0 Cluster: Putative membrane protein; n=4; Strepto... 34 1.3
UniRef50_Q897P9 Cluster: Conserved protein; n=5; Clostridium|Rep... 34 1.3
UniRef50_Q4J2K9 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_Q82HF3 Cluster: Putative uncharacterized protein; n=2; ... 33 2.3
UniRef50_Q09233 Cluster: Putative cuticle collagen 79; n=2; Caen... 33 3.0
UniRef50_Q95Y22 Cluster: Collagen protein 108; n=8; Caenorhabdit... 33 4.0
UniRef50_UPI0000E2217C Cluster: PREDICTED: hypothetical protein;... 32 5.3
UniRef50_UPI0000DD7FF6 Cluster: PREDICTED: hypothetical protein;... 32 5.3
UniRef50_UPI00015A4FAF Cluster: UPI00015A4FAF related cluster; n... 32 5.3
UniRef50_Q4SRK6 Cluster: Chromosome 8 SCAF14525, whole genome sh... 32 5.3
UniRef50_UPI000155D423 Cluster: PREDICTED: hypothetical protein;... 32 7.0
UniRef50_UPI0000E21A37 Cluster: PREDICTED: hypothetical protein;... 32 7.0
UniRef50_A7HBW9 Cluster: Putative uncharacterized protein; n=1; ... 32 7.0
UniRef50_Q2H4N8 Cluster: Putative uncharacterized protein; n=1; ... 32 7.0
UniRef50_Q9NQT8 Cluster: Kinesin-like protein KIF13B; n=28; Eute... 32 7.0
UniRef50_UPI0000F2146D Cluster: PREDICTED: similar to alpha-1 ty... 31 9.2
>UniRef50_UPI00015B63A5 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 1141
Score = 34.3 bits (75), Expect = 1.3
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPNSGPSASGRDP 41
GP FP PG PGG +P+ GPS+ G+ P
Sbjct: 156 GPGGFPSGPGS----PGGNGYPSGGPSSGGQRP 184
>UniRef50_Q9RJC0 Cluster: Putative membrane protein; n=4;
Streptomyces|Rep: Putative membrane protein -
Streptomyces coelicolor
Length = 718
Score = 34.3 bits (75), Expect = 1.3
Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 139 GPETFPG-SPGQVGEQPGGVAFPNSGPSASGRDPRL 35
GP+T PG PGQ GEQPGG N G G D L
Sbjct: 512 GPDTPPGPEPGQGGEQPGG----NDGEQPGGNDGEL 543
>UniRef50_Q897P9 Cluster: Conserved protein; n=5; Clostridium|Rep:
Conserved protein - Clostridium tetani
Length = 120
Score = 34.3 bits (75), Expect = 1.3
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRDPRLQAAS 23
PG PG+ + PGGV P +GP S R QAAS
Sbjct: 19 PGGPGRPPQGPGGVNRPPTGPPPSFTPQRPQAAS 52
>UniRef50_Q4J2K9 Cluster: Putative uncharacterized protein; n=1;
Azotobacter vinelandii AvOP|Rep: Putative
uncharacterized protein - Azotobacter vinelandii AvOP
Length = 366
Score = 34.3 bits (75), Expect = 1.3
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 9 FGSIHEAAWSRGSLP-EALG--PLLGNATPPGCSPTCPGEPGKVSGP*VIP 152
F H A W RG LP +AL P + PP +P P PG + P V+P
Sbjct: 142 FYEAHLARWYRGELPLQALAREPQMAGWQPPTEAPPSPPRPGVEAAPAVLP 192
>UniRef50_Q82HF3 Cluster: Putative uncharacterized protein; n=2;
Streptomyces|Rep: Putative uncharacterized protein -
Streptomyces avermitilis
Length = 903
Score = 33.5 bits (73), Expect = 2.3
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 12 GSIHEAAWSRGSLPEALGPLLGNATPPGCSPTCPGEPGKVSGP*VIPPS 158
G I +AA S+ + P G G PPG +P PG PG P +PP+
Sbjct: 289 GDIADAATSKAAPPR--GARAGAPRPPG-APGVPGAPGTPGAPGAMPPA 334
>UniRef50_Q09233 Cluster: Putative cuticle collagen 79; n=2;
Caenorhabditis|Rep: Putative cuticle collagen 79 -
Caenorhabditis elegans
Length = 283
Score = 33.1 bits (72), Expect = 3.0
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPNSGPSASGRDPR 38
GP PG PGQ G + G A P P A G D R
Sbjct: 187 GPPGTPGRPGQPGRKAIGEAGPKGPPGAPGTDGR 220
>UniRef50_Q95Y22 Cluster: Collagen protein 108; n=8;
Caenorhabditis|Rep: Collagen protein 108 -
Caenorhabditis elegans
Length = 304
Score = 32.7 bits (71), Expect = 4.0
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPG--GVAFPNSGPSASGRD 44
GP+ PG+PGQ G QPG G PN P A G D
Sbjct: 230 GPQGPPGAPGQPGHDGQPGTPGPKGPNGNPGAPGAD 265
>UniRef50_UPI0000E2217C Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 434
Score = 32.3 bits (70), Expect = 5.3
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3
Query: 121 GSPGQVGEQPGGVAFPNSGPSASGRDPRLQAAS*MLPN 8
G PG G GGV FP+S P R PR + PN
Sbjct: 189 GLPGGKGSLAGGVTFPSSAPGGVQRAPRAHCSLGGRPN 226
>UniRef50_UPI0000DD7FF6 Cluster: PREDICTED: hypothetical protein;
n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 268
Score = 32.3 bits (70), Expect = 5.3
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 36 SRGSLPEALGPLLGNA-TPPGCSPTCPGEPGKVSGP*VIPPS 158
S G +P LG L G A T CSP CP P P PPS
Sbjct: 168 SSGRVPTVLG-LFGPARTTTACSPGCPANPQDSHFPDATPPS 208
>UniRef50_UPI00015A4FAF Cluster: UPI00015A4FAF related cluster; n=1;
Danio rerio|Rep: UPI00015A4FAF UniRef100 entry - Danio
rerio
Length = 549
Score = 32.3 bits (70), Expect = 5.3
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 151 GITYGPETFPGSPG--QVGEQPGGVAFPNSGPSASGRDPRLQ 32
G GP+ PG PG Q G +PGG GP SG P+ Q
Sbjct: 259 GPQQGPK--PGGPGPQQQGPKPGGPGIQQQGPKPSGPGPQQQ 298
>UniRef50_Q4SRK6 Cluster: Chromosome 8 SCAF14525, whole genome
shotgun sequence; n=3; Eukaryota|Rep: Chromosome 8
SCAF14525, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1547
Score = 32.3 bits (70), Expect = 5.3
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRDPR 38
PG PGQ P G A P SGP A R PR
Sbjct: 218 PGGPGQ----PAGAAVPRSGPPAQPRRPR 242
>UniRef50_UPI000155D423 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 515
Score = 31.9 bits (69), Expect = 7.0
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 154 GGITYGPETFPGSPGQVGEQPGGVAFPNSGPSASGRDPR 38
GG + E PG+ G G +PG A P P AS PR
Sbjct: 377 GGAAWRREPGPGARGGPGSRPGSAACPPCDPPASPVTPR 415
>UniRef50_UPI0000E21A37 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 401
Score = 31.9 bits (69), Expect = 7.0
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 36 SRGSLPEALGPLLGNATPPGCSPTCP-GEP 122
S +L +ALGP L A PPG PT P EP
Sbjct: 149 STATLSDALGPGLDAAAPPGSMPTAPEAEP 178
>UniRef50_A7HBW9 Cluster: Putative uncharacterized protein; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: Putative
uncharacterized protein - Anaeromyxobacter sp. Fw109-5
Length = 232
Score = 31.9 bits (69), Expect = 7.0
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 18 IHEAAWSRGSLPEALGPLLGNATPPGCSPTCPGEPGKVSGP 140
+ A RG EAL P G +TPPG + T G P SGP
Sbjct: 176 VRSAGAKRGMGDEALTPPAGTSTPPGSTTTPSGTP---SGP 213
>UniRef50_Q2H4N8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 604
Score = 31.9 bits (69), Expect = 7.0
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 133 ETF-PGSPGQVGEQPGGVAFPNSGPSASGRDPRLQA 29
+TF PGSP + G +PG +A P S RD RLQA
Sbjct: 277 DTFAPGSPAENGIEPGFLA-PQSSTQREERDKRLQA 311
>UniRef50_Q9NQT8 Cluster: Kinesin-like protein KIF13B; n=28;
Euteleostomi|Rep: Kinesin-like protein KIF13B - Homo
sapiens (Human)
Length = 1826
Score = 31.9 bits (69), Expect = 7.0
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 36 SRGSLPEALGPLLGNATPPGCSPTCP-GEP 122
S +L +ALGP L A PPG PT P EP
Sbjct: 1574 STATLSDALGPGLDAAAPPGSMPTAPEAEP 1603
>UniRef50_UPI0000F2146D Cluster: PREDICTED: similar to alpha-1 type
XI collagen; n=1; Danio rerio|Rep: PREDICTED: similar to
alpha-1 type XI collagen - Danio rerio
Length = 616
Score = 31.5 bits (68), Expect = 9.2
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPNSGPSASGRD 44
GP FPG PG GE GVA + GP G D
Sbjct: 325 GPVGFPGDPGPPGEP--GVAGIDGGPGEKGED 354
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,088,284
Number of Sequences: 1657284
Number of extensions: 8189288
Number of successful extensions: 30206
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 27233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30123
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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