Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20657
         (462 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     25   1.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.7  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    25   1.7  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    25   1.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.0  
AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    24   3.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   3.9  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   3.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    22   9.1  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -3

Query: 154 GGITYGPETFPGSPGQVGEQPGGVAFPNSGP 62
           GG    P T    P    E PG V+   SGP
Sbjct: 98  GGAVVSPATQIVPPSAASESPGSVSSQPSGP 128



 Score = 22.2 bits (45), Expect = 9.1
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = -3

Query: 136 PETFPGSPGQVGEQPGG-VAFPNSGPSASGRDPRLQ 32
           P     SPG V  QP G +  P   P A   D RL+
Sbjct: 111 PSAASESPGSVSSQPSGPIHIPAKRP-AFDTDTRLR 145


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
 Frame = -3

Query: 139 GPETFPGSPGQVGEQPGGVAFPN-SGP 62
           GPE  PG  G  GE  G V  P   GP
Sbjct: 456 GPEGMPGDKGDKGES-GSVGMPGPQGP 481



 Score = 23.4 bits (48), Expect = 3.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 139 GPETFPGSPGQVG 101
           GP  FPG PG+ G
Sbjct: 247 GPRGFPGRPGEKG 259


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 172 RLFF*EGGITYGPETFPGSPGQVGEQPGG 86
           RLFF  G    GPE+    PG    + GG
Sbjct: 372 RLFFRSGLFVVGPESAGAHPGPTCYRKGG 400


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 172 RLFF*EGGITYGPETFPGSPGQVGEQPGG 86
           RLFF  G    GPE+    PG    + GG
Sbjct: 372 RLFFRSGLFVVGPESAGAHPGPTCYRKGG 400


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 3   FRFGSIHEAAWSRGSLPEALGPLLGNATPPGCSPTCP 113
           F F     A+ +  SLPE +   L N   P C   CP
Sbjct: 73  FSFAPCTLASATEISLPELVTRSLSNLELPSCRLPCP 109


>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 166 FF*EGGITYGPETFPGSPGQVGEQPGGVAFPNSGPSASG 50
           FF +GG   G  +F GS    G+Q GGV F  +G   SG
Sbjct: 118 FFGQGGGQGGIPSF-GS----GQQNGGVPFLGNGQGQSG 151


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 15/42 (35%), Positives = 16/42 (38%)
 Frame = -3

Query: 151 GITYGPETFPGSPGQVGEQPGGVAFPNSGPSASGRDPRLQAA 26
           G TY     P S       P  VA PNS   AS   P   A+
Sbjct: 58  GRTYASALSPSSSSASPSSPSSVASPNS--RASNMSPESSAS 97


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 145 TYGPETFPGSPGQVGEQP 92
           TY P  +PG+P Q    P
Sbjct: 50  TYAPNIYPGTPHQAHYSP 67


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 139 GPETFPGSPGQVGE 98
           GP   PG+PG  GE
Sbjct: 737 GPAGIPGAPGAPGE 750


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,528
Number of Sequences: 2352
Number of extensions: 7935
Number of successful extensions: 29
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)