Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20657
(462 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.100
Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.100
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.13
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 33 0.13
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 33 0.13
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 33 0.13
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 28 0.39
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 0.39
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 0.39
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 28 0.39
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 28 0.39
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 30 0.70
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 30 0.70
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 30 0.93
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 0.93
Z81507-1|CAB04133.1| 485|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF036698-2|AAB88353.1| 485|Caenorhabditis elegans Puf (pumilio/... 29 1.6
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 28 2.8
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 28 2.8
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 28 2.8
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 2.8
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 28 2.8
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 28 2.8
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 28 2.8
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 28 2.8
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 28 2.8
CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical ... 28 2.8
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 3.7
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 28 3.7
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 28 3.7
U13876-6|AAA21175.2| 444|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen prot... 28 3.7
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 27 4.9
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 27 4.9
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 27 4.9
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 27 4.9
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical pr... 27 6.5
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 27 6.5
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 27 6.5
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 27 6.5
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 27 6.5
L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen prote... 27 6.5
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 27 6.5
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 27 6.5
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 27 6.5
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 27 6.5
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z75537-3|CAA99836.1| 1096|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70207-2|CAA94130.2| 635|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 27 8.6
U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protei... 27 8.6
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 27 8.6
AL031627-12|CAA20963.2| 305|Caenorhabditis elegans Hypothetical... 27 8.6
AJ512338-1|CAD54511.1| 635|Caenorhabditis elegans trehalase pro... 27 8.6
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 27 8.6
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 27 8.6
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 27 8.6
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 27 8.6
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 27 8.6
AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.100
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPG--GVAFPNSGPSASGRD 44
GP+ PG+PGQ G QPG G PN P A G D
Sbjct: 225 GPQGQPGAPGQPGHDGQPGAPGPKGPNGNPGAPGAD 260
>Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical
protein C09G5.3 protein.
Length = 283
Score = 33.1 bits (72), Expect = 0.100
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPNSGPSASGRDPR 38
GP PG PGQ G + G A P P A G D R
Sbjct: 187 GPPGTPGRPGQPGRKAIGEAGPKGPPGAPGTDGR 220
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPG--GVAFPNSGPSASGRD 44
GP+ PG+PGQ G QPG G PN P A G D
Sbjct: 225 GPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGAD 260
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPG--GVAFPNSGPSASGRD 44
GP+ PG+PGQ G QPG G PN P A G D
Sbjct: 225 GPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGAD 260
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPG--GVAFPNSGPSASGRD 44
GP+ PG+PGQ G QPG G PN P A G D
Sbjct: 225 GPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGAD 260
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPG--GVAFPNSGPSASGRD 44
GP+ PG+PGQ G QPG G PN P A G D
Sbjct: 225 GPQGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGAD 260
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPG--GVAFPNSGPSASGRD 44
GP+ PG+PGQ G QPG G PN P A G D
Sbjct: 230 GPQGPPGAPGQPGHDGQPGTPGPKGPNGNPGAPGAD 265
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 27.9 bits (59), Expect(2) = 0.39
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG PGQ G+ G P P G+D
Sbjct: 1296 PGMPGQPGQSIAGPVGPPGAPGLQGKD 1322
Score = 21.8 bits (44), Expect(2) = 0.39
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 139 GPETFPGSPGQVG 101
G FPG PGQ G
Sbjct: 1270 GDSGFPGQPGQEG 1282
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.9 bits (59), Expect(2) = 0.39
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG PGQ G+ G P P G+D
Sbjct: 1260 PGMPGQPGQSIAGPVGPPGAPGLQGKD 1286
Score = 21.8 bits (44), Expect(2) = 0.39
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 139 GPETFPGSPGQVG 101
G FPG PGQ G
Sbjct: 1234 GDSGFPGQPGQEG 1246
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.9 bits (59), Expect(2) = 0.39
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG PGQ G+ G P P G+D
Sbjct: 1260 PGMPGQPGQSIAGPVGPPGAPGLQGKD 1286
Score = 21.8 bits (44), Expect(2) = 0.39
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 139 GPETFPGSPGQVG 101
G FPG PGQ G
Sbjct: 1234 GDSGFPGQPGQEG 1246
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.9 bits (59), Expect(2) = 0.39
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG PGQ G+ G P P G+D
Sbjct: 1259 PGMPGQPGQSIAGPVGPPGAPGLQGKD 1285
Score = 21.8 bits (44), Expect(2) = 0.39
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 139 GPETFPGSPGQVG 101
G FPG PGQ G
Sbjct: 1233 GDSGFPGQPGQEG 1245
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.9 bits (59), Expect(2) = 0.39
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG PGQ G+ G P P G+D
Sbjct: 1259 PGMPGQPGQSIAGPVGPPGAPGLQGKD 1285
Score = 21.8 bits (44), Expect(2) = 0.39
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 139 GPETFPGSPGQVG 101
G FPG PGQ G
Sbjct: 1233 GDSGFPGQPGQEG 1245
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 31.1 bits (67), Expect = 0.40
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -3
Query: 145 TYGPETFPGSPGQVGE--QPG--GVAFPNSGPSASGRD 44
T GP+ PG PGQ G QPG G PN P G D
Sbjct: 190 TPGPQGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPGAD 227
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRDP 41
PGSPGQ G QPG N GPS +P
Sbjct: 138 PGSPGQDG-QPGAPG--NKGPSGPNGNP 162
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.40
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -3
Query: 145 TYGPETFPGSPGQVGE--QPG--GVAFPNSGPSASGRD 44
T GP+ PG PGQ G QPG G PN P G D
Sbjct: 223 TPGPQGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPGAD 260
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRDP 41
PGSPGQ G QPG N GPS +P
Sbjct: 171 PGSPGQDG-QPGAPG--NKGPSGPNGNP 195
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ-PGGVAFPNSGPSASGRD 44
G + PG PG G+ P G A PN P A G+D
Sbjct: 177 GKDGPPGPPGPDGDSGPNGEAGPNGEPGAPGKD 209
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPG--GVAFPNSGPSASGRD 44
GP+ PG PGQ G QPG G PN P G D
Sbjct: 225 GPQGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPGAD 260
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRDP 41
PGSPGQ G QPG N GPS +P
Sbjct: 171 PGSPGQDG-QPGAPG--NKGPSGQNGNP 195
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPN-SGPSASGRDPRLQA 29
GP PG PG+ G +PGG P G AS PR Q+
Sbjct: 147 GPSGHPGKPGRPG-RPGGHGMPGMPGLGASPCQPRTQS 183
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.9 bits (64), Expect = 0.93
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPGGVAFPNSGPSASGR 47
GP+ PG PGQ G QPG P S S G+
Sbjct: 194 GPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQ 226
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.9 bits (64), Expect = 0.93
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -3
Query: 145 TYGPETFPGSPGQVGE--QPGGVAFPNSGPSASGRDPRLQAA 26
T GP PG PG +G QPG GP DP + A
Sbjct: 254 TPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGA 295
>Z81507-1|CAB04133.1| 485|Caenorhabditis elegans Hypothetical
protein F18A11.1 protein.
Length = 485
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 264 QDISKQIPVKPKLPCFHSILHFFLLTMY*ILVNCFCKKNNQF 389
Q + ++ PKLPCF + M I+ NC+ +N+F
Sbjct: 259 QQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLSSNEF 300
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPNSG 65
GP+ PG+PGQ G PG P SG
Sbjct: 274 GPDGAPGNPGQPG-APGDAGAPGSG 297
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQP-GGVAFPNSGPSASG 50
GP PG PG G P GG A P P G
Sbjct: 181 GPPGAPGGPGAPGNTPSGGAAGPPGPPGPPG 211
>AF036698-2|AAB88353.1| 485|Caenorhabditis elegans Puf
(pumilio/fbf) domain-containingprotein 7 protein.
Length = 485
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 264 QDISKQIPVKPKLPCFHSILHFFLLTMY*ILVNCFCKKNNQF 389
Q + ++ PKLPCF + M I+ NC+ +N+F
Sbjct: 259 QQVIDRLAENPKLPCFKFRIQLLHSLMTCIVRNCYRLSSNEF 300
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = -3
Query: 139 GPETFPGSPGQVGE-----QPGGVAFPNSGPSASGR 47
GP+ PG+PG G+ QPG A S P A G+
Sbjct: 189 GPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQ 224
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPG----GVAFPNSGPSASG 50
GP+ G+PGQ G+ G G A P P A G
Sbjct: 165 GPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPG 198
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = -3
Query: 133 ETFPGSPGQVGEQ--PGGVAFPNS--GPSASG 50
E+ PG+PGQ G Q PG P + GP +G
Sbjct: 216 ESSPGAPGQAGPQGPPGPAGSPGAPGGPGQAG 247
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = -3
Query: 139 GPETFPGSPGQVGE-----QPGGVAFPNSGPSASGR 47
GP+ PG+PG G+ QPG A S P A G+
Sbjct: 189 GPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQ 224
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPG----GVAFPNSGPSASG 50
GP+ G+PGQ G+ G G A P P A G
Sbjct: 165 GPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPG 198
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = -3
Query: 133 ETFPGSPGQVGEQ--PGGVAFPNS--GPSASG 50
E+ PG+PGQ G Q PG P + GP +G
Sbjct: 216 ESSPGAPGQAGPQGPPGPAGSPGAPGGPGQAG 247
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = -3
Query: 139 GPETFPGSPGQVGE-----QPGGVAFPNSGPSASGR 47
GP+ PG+PG G+ QPG A S P A G+
Sbjct: 189 GPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQ 224
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPG----GVAFPNSGPSASG 50
GP+ G+PGQ G+ G G A P P A G
Sbjct: 165 GPQGDAGAPGQAGQGSGAGAPGPAGPKGAPGAPG 198
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = -3
Query: 133 ETFPGSPGQVGEQ--PGGVAFPNS--GPSASG 50
E+ PG+PGQ G Q PG P + GP +G
Sbjct: 216 ESSPGAPGQAGPQGPPGPAGSPGAPGGPGQAG 247
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGG 86
GP+ PG PGQ G QPGG
Sbjct: 247 GPDGRPGQPGQAG-QPGG 263
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ-PGGVAFPNSGPSASGR 47
GP PG+PG G Q P G A N G + G+
Sbjct: 239 GPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQ 270
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG+PG+V E PG P P A G D
Sbjct: 213 PGAPGKVNEVPG----PAGAPGAPGPD 235
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ-PGGVAFPNSGPSASGR 47
GP PG+PG G Q P G A N G + G+
Sbjct: 301 GPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQ 332
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG+PG+V E PG P P A G D
Sbjct: 275 PGAPGKVNEVPG----PAGAPGAPGPD 297
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 157 EGGITYGPETFPGSPGQVGE--QPGGVAFPNSGPSASGRDP 41
EG GP+ PG+PG+ G +PG FP + P + + P
Sbjct: 100 EGCCQPGPQGAPGAPGKPGRPGKPGAPGFPGN-PGKAPQKP 139
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ-PGGVAFPNSGPSASGR 47
GP PG+PG G Q P G A N G + G+
Sbjct: 238 GPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQ 269
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG+PG+V E PG P P A G D
Sbjct: 212 PGAPGKVNEVPG----PAGAPGAPGPD 234
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ-PGGVAFPNSGPSASGR 47
GP PG+PG G Q P G A N G + G+
Sbjct: 238 GPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQ 269
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG+PG+V E PG P P A G D
Sbjct: 212 PGAPGKVNEVPG----PAGAPGAPGPD 234
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ-PGGVAFPNSGPSASGR 47
GP PG+PG G Q P G A N G + G+
Sbjct: 239 GPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQ 270
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG+PG+V E PG P P A G D
Sbjct: 213 PGAPGKVNEVPG----PAGAPGAPGPD 235
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ-PGGVAFPNSGPSASGR 47
GP PG+PG G Q P G A N G + G+
Sbjct: 239 GPAGSPGAPGNPGSQGPQGPAGDNGGAGSPGQ 270
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG+PG+V E PG P P A G D
Sbjct: 213 PGAPGKVNEVPG----PAGAPGAPGPD 235
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 157 EGGITYGPETFPGSPGQVGE--QPGGVAFPNSGPSASGRDP 41
EG GP+ PG+PG+ G +PG FP + P + + P
Sbjct: 100 EGCCQPGPQGAPGAPGKPGRPGKPGAPGFPGN-PGKAPQKP 139
>CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical
protein C42C1.7 protein.
Length = 710
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 265 WYVPLTFLSFCTLFMLLLIENIAIL 191
WY+ L+ LS L MLLL+ N+ ++
Sbjct: 392 WYLKLSNLSIAILIMLLLVVNLILI 416
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASG 50
PGSPG+ G++ G+ P+ P + G
Sbjct: 192 PGSPGKSGQRGRGLPGPSGAPGSQG 216
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVG-EQPGGVAFPNSGPSASG 50
GP PG PGQ G QPGG P A G
Sbjct: 252 GPAGAPGQPGQAGSSQPGGPG-PQGDAGAPG 281
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 124 PGSPGQVGEQPG--GVAFPNSGPSASG 50
PG+PGQV + PG G A P P +G
Sbjct: 229 PGAPGQVVDVPGTPGPAGPPGSPGPAG 255
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVG-EQPGGVAFPNSGPSASG 50
GP PG PGQ G QPGG P A G
Sbjct: 252 GPAGAPGQPGQAGSSQPGGPG-PQGDAGAPG 281
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 124 PGSPGQVGEQPG--GVAFPNSGPSASG 50
PG+PGQV + PG G A P P +G
Sbjct: 229 PGAPGQVVDVPGTPGPAGPPGSPGPAG 255
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ----PGGVAFPNSGPSASGR 47
GP PG+PG+ G + P G PN GP G+
Sbjct: 152 GPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQ 186
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVG-EQPGGVAFPNSGPSASG 50
GP PG PGQ G QPGG P A G
Sbjct: 252 GPAGAPGQPGQAGSSQPGGPG-PQGDAGAPG 281
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 124 PGSPGQVGEQPG--GVAFPNSGPSASG 50
PG+PGQV + PG G A P P +G
Sbjct: 229 PGAPGQVVDVPGTPGPAGPPGSPGPAG 255
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVG-EQPGGVAFPNSGPSASG 50
GP PG PGQ G QPGG P A G
Sbjct: 252 GPAGAPGQPGQAGSSQPGGPG-PQGDAGAPG 281
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 124 PGSPGQVGEQPG--GVAFPNSGPSASG 50
PG+PGQV + PG G A P P +G
Sbjct: 229 PGAPGQVVDVPGTPGPAGPPGSPGPAG 255
>U13876-6|AAA21175.2| 444|Caenorhabditis elegans Hypothetical
protein F57B9.8 protein.
Length = 444
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 115 PGQVGEQPGGVAFPNSGPSASGRDPRLQ 32
P PGG + P+SGP SG+D RL+
Sbjct: 416 PSSASNGPGGNSGPSSGP-LSGKDSRLK 442
>AF016671-3|AAB66109.2| 205|Caenorhabditis elegans Collagen protein
72 protein.
Length = 205
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPNSGPSASGRDP 41
GP PG PGQ G+ G N+GP +P
Sbjct: 65 GPPGPPGLPGQPGQNGNGGRPGNNGPMGQPGEP 97
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 7/39 (17%)
Frame = -3
Query: 139 GPETFPGSPGQVGE-------QPGGVAFPNSGPSASGRD 44
GP+ PG+PGQ G P G A PN P G+D
Sbjct: 213 GPQGPPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHPGQD 251
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASG 50
PGSPG+ G++ G+ P+ P G
Sbjct: 192 PGSPGKSGQRGRGLPGPSGAPGPQG 216
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPNSGPSASG 50
G PG+PGQ G++ G P+ P G
Sbjct: 182 GAPGHPGAPGQGGQRSRGTPGPSGAPGPQG 211
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPGGVAFPNSGPSASGRD 44
G + FPG PG +G+ G FP +G + G D
Sbjct: 470 GRDGFPGIPGDIGDPGYSGEKGFPGTGVNKVGPD 503
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 6/38 (15%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ----PGGVAFP-NSGPSA-SGRD 44
G + PG+PGQ G++ PGG P N+GP+ +G+D
Sbjct: 198 GQDGQPGAPGQDGQRGSGAPGGPGAPGNAGPAGPAGQD 235
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 6/38 (15%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ----PGGVAFP-NSGPSA-SGRD 44
G + PG+PGQ G++ PGG P N+GP+ +G+D
Sbjct: 210 GQDGQPGAPGQDGQRGSGAPGGPGAPGNAGPAGPAGQD 247
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPG--GVAFPNSGPSASGRD 44
GP PG+PGQ G QPG G P+ P G D
Sbjct: 226 GPPGQPGTPGQNG-QPGQPGPKGPSGQPGQPGSD 258
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPGGVAFPNSGPSASGRDP 41
GP+ PG+PG GE PG + + GP+ P
Sbjct: 146 GPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPP 180
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -3
Query: 133 ETFPGSPGQVGEQPGGVAFPNSGPSASG 50
E+ PG+PGQ G P G P P A G
Sbjct: 216 ESIPGAPGQAG--PQGPPGPAGSPGAPG 241
>Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical
protein C43F9.10 protein.
Length = 679
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Frame = -3
Query: 283 ICLEMSWYV--PLTF--LSFCTLFMLLLIENIAILPIA 182
+C+EM +Y+ P+ F LSFC+ M L + ++ ++ I+
Sbjct: 137 LCVEMQFYLLAPIIFIFLSFCSTGMFLAVFHLILISIS 174
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 154 GGITYGPETFPGSPGQVGEQPGGVAFPNSGPS-ASGRDPRLQAAS*MLP 11
G YGP PG+ G PG + + P+ +G DPR AA+ +LP
Sbjct: 84 GAFPYGPGRLPGNYF-AGPFPG---YSGAQPNWYNGNDPRFAAAAALLP 128
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGE-QPGGVAFPNSGPSASG 50
GP PG PGQ G QPGG P A G
Sbjct: 253 GPAGAPGQPGQSGSAQPGGPG-PQGDAGAPG 282
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGE-QPGGVAFPNSGPSASG 50
GP PG PGQ G QPGG P A G
Sbjct: 249 GPAGAPGQPGQSGSGQPGGPG-PQGDAGAPG 278
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPGGVAFPNSGPSASGRDP 41
GP+ PG+PG GE PG + + GP+ P
Sbjct: 146 GPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPP 180
>Z68320-1|CAB63328.2| 278|Caenorhabditis elegans Hypothetical
protein W07A12.5 protein.
Length = 278
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 136 PETFPGSPGQVGEQ-PGGVAFPNSGPSASGR 47
P PGSPG+VG + P GV P+ +G+
Sbjct: 136 PPGAPGSPGEVGHKGPEGVLGPSGKKGKTGQ 166
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ--PGGVAFP--NSGPSASGRDPRLQAA 26
GP PG PGQ G+ PG V P N P + P + A
Sbjct: 301 GPSGLPGPPGQPGQNGAPGEVGQPGDNGAPGSCDHCPPARLA 342
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPNSG--PSASGRDPRLQAA 26
GPE PG+PG++GE G +P P G+ +L A
Sbjct: 170 GPEGPPGNPGRIGEH-GREGYPGQQGIPGEPGKPGKLGEA 208
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 139 GPETFPGSPGQVGE--QPGGVAFPNSGPSASGRD 44
GP PGSPG GE +PG P P A G++
Sbjct: 229 GPAGQPGSPGNDGESGKPGNAGRPGP-PGAPGKN 261
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ--PGGVAFP--NSGPSASGRDPRLQAA 26
GP PG PGQ G+ PG V P N P + P + A
Sbjct: 282 GPSGLPGPPGQPGQNGAPGEVGQPGDNGAPGSCDHCPPARLA 323
>L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen protein
90 protein.
Length = 305
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVA-FPNSGPSASGRDPRLQA 29
G + +PG PG+ GE PG V N P + RD + ++
Sbjct: 250 GRDAYPGQPGKAGE-PGAVGKDANYCPCPARRDSKTES 286
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -3
Query: 124 PGSPGQVGEQPG--GVAFPNSGPSASG 50
PG+PGQV + PG G A P P SG
Sbjct: 264 PGAPGQVVDVPGAPGPAGPPGPPGPSG 290
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPNSGPSASGR 47
GP PG PGQ G G P A G+
Sbjct: 287 GPSGAPGHPGQAGSSLPGAPGPQGDAGAPGQ 317
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 45 SLPEALGPLLGNATPPGCSPTCPGEPGKVSGP 140
S P LGP G PG SP P P + GP
Sbjct: 1407 SNPSILGPSTGGDPSPGPSPNEPSNP-SILGP 1437
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 151 GITYGPETFPGSPGQVGEQPGGVAFPNSGPSASG 50
G+ ++ PG+PGQ G P G P+ P A G
Sbjct: 215 GVDAQSQSNPGAPGQAG--PQGPPGPSGAPGAPG 246
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -3
Query: 151 GITYGPETFPGSPGQVGEQ--PGGVAFPNSG 65
G GP PG PG GEQ PG P SG
Sbjct: 88 GCPAGPPGPPGQPGAPGEQGHPGLAGQPGSG 118
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -3
Query: 148 ITYGPETFPGSPGQVGEQPGGVAFPNSGPSASG 50
IT GP PG PG G PGG+ P P G
Sbjct: 232 ITSGPPGPPGPPGPPG-NPGGIG-PRGPPGDPG 262
>Z75537-3|CAA99836.1| 1096|Caenorhabditis elegans Hypothetical protein
F18E2.3 protein.
Length = 1096
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 323 SLFFINHVLNFS-KLLL*EK*SIFLYTSKMYINDTG 427
++FF+ + FS KLL +K ++ Y +K+Y N G
Sbjct: 999 NIFFLEIAIEFSGKLLAQDKMAVVRYLNKIYTNRVG 1034
>Z70207-2|CAA94130.2| 635|Caenorhabditis elegans Hypothetical
protein F15A2.2 protein.
Length = 635
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 63 GPLLGNATPPGCSPTCPGEPGKVSGP*VI 149
GP+L N+ G TCPG+ KV+ V+
Sbjct: 60 GPILTNSWQFGLQKTCPGDKLKVTAKEVL 88
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 124 PGSPGQVGEQPGGVAFPNSGPSASGRD 44
PG+PG+V E PG P P A G D
Sbjct: 212 PGAPGRVNEVPG----PAGAPGAPGPD 234
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ-PGGVAFPNSGPSAS 53
GP+ PG+PG GE P G+ P+S S S
Sbjct: 102 GPQGAPGAPGTPGENGPRGMDNPHSLGSTS 131
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ-PGGVAFPNSGPSAS 53
GP+ PG+PG GE P G+ P+S S S
Sbjct: 102 GPQGAPGAPGTPGENGPRGMDNPHSLGSTS 131
>U50312-8|AAA92324.1| 294|Caenorhabditis elegans Collagen protein
145 protein.
Length = 294
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Frame = -3
Query: 145 TYGPETFPGSPGQVGEQ----PGGVAFP-NSGPSA-SGRD 44
T G + FPG PG G++ PG P N+GP+ +G+D
Sbjct: 196 TPGQDGFPGQPGADGQRGSGAPGAPGAPGNAGPAGPAGQD 235
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Frame = -3
Query: 145 TYGPETFPGSPGQVGEQPG-----GVAFPNSGPSASG 50
T G PG+PGQV E PG G A P P +G
Sbjct: 214 TDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPPGPAG 250
>AL031627-12|CAA20963.2| 305|Caenorhabditis elegans Hypothetical
protein Y102A5C.22 protein.
Length = 305
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 298 FGLTGICLEMSWYVPLTFLSFCTLFMLLLIENI 200
F T +CL +SWY FL F + +L+ + ++
Sbjct: 158 FSTTPVCLTISWYA--DFLKFNAIVILIAVIDV 188
>AJ512338-1|CAD54511.1| 635|Caenorhabditis elegans trehalase
protein.
Length = 635
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 63 GPLLGNATPPGCSPTCPGEPGKVSGP*VI 149
GP+L N+ G TCPG+ KV+ V+
Sbjct: 60 GPILTNSWQFGLQKTCPGDKLKVTAKEVL 88
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 84 TPPGCSPTCPGEPGKVSGP 140
TPP CSP G PGK GP
Sbjct: 132 TPPPCSPCPAGPPGK-PGP 149
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Frame = -3
Query: 145 TYGPETFPGSPGQVGEQPG-----GVAFPNSGPSASG 50
T G PG+PGQV E PG G A P P +G
Sbjct: 224 TDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPPGPAG 260
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQ-PGGVAFPNSGPSASG 50
GP+ G PG VGEQ P G P P G
Sbjct: 254 GPQGDAGRPGPVGEQGPQGPEGPQGPPGEPG 284
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPNSGPSASGRD 44
GP+ PG+PG G+ G P P G+D
Sbjct: 249 GPDGLPGTPGNPGQD--GEQGPAGEPGRDGKD 278
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 139 GPETFPGSPGQVGEQPGGVAFPN-SGPSASGRD 44
GP+ PG+PG+ GE G P GP A D
Sbjct: 98 GPDGEPGTPGKDGEPGQGPGEPGPPGPDAELHD 130
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 75 GNATPPGCSPTCPGEPGKVSGP 140
G + PPG P PG+PGK P
Sbjct: 211 GPSGPPG-RPGAPGQPGKAGSP 231
>AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical
protein C53D5.5 protein.
Length = 642
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 123 QVHRDRWASSQEGWHFLTAARAPPEETHGSKLLHECYRIG 4
+++RD+W S+ GW A A P E HG + E + G
Sbjct: 180 EMYRDKWNQSRIGW----KAIAVPGELHGLRTEFERFGSG 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,064,328
Number of Sequences: 27780
Number of extensions: 196124
Number of successful extensions: 1337
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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