Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20656
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    25   0.78 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   5.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   5.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   9.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   9.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.6  

>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 314 QRRCRSGESPPEPLGR 361
           Q +C +GE+P +P+GR
Sbjct: 48  QLKCATGEAPCDPVGR 63


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +2

Query: 101 TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYS 244
           ++PRS      SS +     S  S+   ++  RLL  +P+      YS
Sbjct: 152 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYS 199


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +2

Query: 101 TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYS 244
           ++PRS      SS +     S  S+   ++  RLL  +P+      YS
Sbjct: 143 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYS 190


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 624 YFNIDVSQIDLRRPLQVLF 680
           +F ID    + R+P+++LF
Sbjct: 301 FFEIDRINAESRKPIRILF 319


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 226 SSQWRRLQQTEAQSFHWCRRHGDS 155
           S++   + +  A  + W + HGDS
Sbjct: 155 SAEENSVSEPPANFYPWMKAHGDS 178


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 518 CEKNSLPQRTSLSKRNQLEPLLYNSYSQM 604
           C KNS  + +   K  +  P  YN+   M
Sbjct: 66  CSKNSPEKESEEKKSKEKPPYSYNALIMM 94


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 226 SSQWRRLQQTEAQSFHWCRRHGDS 155
           S++   + +  A  + W + HGDS
Sbjct: 155 SAEENSVSEPPANFYPWMKAHGDS 178


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 226 SSQWRRLQQTEAQSFHWCRRHGDS 155
           S++   + +  A  + W + HGDS
Sbjct: 155 SAEENSVSEPPANFYPWMKAHGDS 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,664
Number of Sequences: 336
Number of extensions: 3109
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)