Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20656
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   2.3  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   4.0  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   4.0  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   9.2  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   9.2  

>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 594 TRKCISLVSPYFNIDVSQIDLRRPLQVLFLFLYN 695
           TR C+  +     +D S   + R +Q L ++LYN
Sbjct: 133 TRLCLPQIFNNILMDFSVEQINRSIQELMIYLYN 166


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
 Frame = +2

Query: 269 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAP--DRSYR 442
           PA    D+      G+     G S     G     + D DE H  GRK   AP   R   
Sbjct: 616 PAGYREDTTGSYKYGKLSSSGGASSTTHSGAPSRSQSDEDEQHSVGRK-GLAPLIQRGEG 674

Query: 443 SGEGKEQIP 469
           S EGK   P
Sbjct: 675 SFEGKAMPP 683


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 202 QTEAQSFHWCRRHGD 158
           QT +Q+ HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -3

Query: 503 QLSGIEVLDAVQEFVLFLLRFDSFDRGQWILF 408
           ++  + V+D     V+F + F +F+ G WI +
Sbjct: 426 KIKDVNVIDKYSR-VIFPVSFAAFNAGYWIFY 456


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 386 LSLVEVFNSVQEVLVGFLRCDNV 318
           LS  ++ +S+  +L+G  RCD V
Sbjct: 108 LSRPQMRSSINYLLIGLARCDTV 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,376
Number of Sequences: 2352
Number of extensions: 13732
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)