Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20655
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56EDE Cluster: PREDICTED: similar to CG1213-PA,...    36   1.2  
UniRef50_A4R0Q9 Cluster: Putative uncharacterized protein; n=3; ...    35   2.1  
UniRef50_Q2SIG5 Cluster: Rhs family protein; n=1; Hahella chejue...    34   2.8  
UniRef50_Q4K7H2 Cluster: Putative uncharacterized protein; n=4; ...    33   6.4  

>UniRef50_UPI0000D56EDE Cluster: PREDICTED: similar to CG1213-PA,
           isoform A; n=5; Tribolium castaneum|Rep: PREDICTED:
           similar to CG1213-PA, isoform A - Tribolium castaneum
          Length = 457

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = +2

Query: 533 VSEEMESWLSSVIGYGGIPWVFLLPVFTEFIGRKIPFIILCVNSLVAYV 679
           +  ++ESW++S+I  G +   F      E  GRK+  +++ +  +++YV
Sbjct: 50  IDPDIESWIASLINIGAMVGPFPYGFIAERYGRKVSLLLIAIPHIISYV 98


>UniRef50_A4R0Q9 Cluster: Putative uncharacterized protein; n=3;
           Sordariomycetes|Rep: Putative uncharacterized protein -
           Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 524

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +2

Query: 542 EMESWLSSVIGYGGIPWVFLLPVFTEFIGRKIPFIILCVNSLVAYV 679
           +M   L ++   G +  +F +P FT+  GRK+P ++ CV  +V  V
Sbjct: 73  QMLGLLGALYQIGSMISIFFVPFFTDHFGRKVPIVMGCVIMIVGAV 118


>UniRef50_Q2SIG5 Cluster: Rhs family protein; n=1; Hahella chejuensis
            KCTC 2396|Rep: Rhs family protein - Hahella chejuensis
            (strain KCTC 2396)
          Length = 1427

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
 Frame = +1

Query: 478  EHPRYSYLSSERGKLYRSSLGGNGVMAI-----IRHRIWRDTLGI 597
            +HP Y Y+ + + +L R   GG+G++A        HR+W++  G+
Sbjct: 1062 DHPTYKYIYNNKERLIRVEAGGDGIVASYGYNPFGHRMWKEVDGL 1106


>UniRef50_Q4K7H2 Cluster: Putative uncharacterized protein; n=4;
           Pseudomonas|Rep: Putative uncharacterized protein -
           Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)
          Length = 204

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 11/27 (40%), Positives = 21/27 (77%)
 Frame = +1

Query: 484 PRYSYLSSERGKLYRSSLGGNGVMAII 564
           P++ YL+ ERG+LY +S+ G G++ ++
Sbjct: 153 PKFMYLNQERGRLYAASVWGVGLLVLV 179


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,547,265
Number of Sequences: 1657284
Number of extensions: 11755367
Number of successful extensions: 33384
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33381
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)