Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20655
         (680 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114552-1|AAI14553.1| 1395|Homo sapiens G protein-coupled recep...    30   8.8  
BC068507-1|AAH68507.1|  778|Homo sapiens chromosome 11 open read...    30   8.8  
BC063284-1|AAH63284.1|  797|Homo sapiens CAS1 domain containing ...    30   8.8  
AL035427-1|CAB55683.1| 1395|Homo sapiens G protein-coupled recep...    30   8.8  
AK027207-1|BAB15691.1|  724|Homo sapiens protein ( Homo sapiens ...    30   8.8  
AF397424-1|AAK97479.2|  797|Homo sapiens C7ORF12 protein.              30   8.8  
AF355594-1|AAL33538.1|  797|Homo sapiens O-acetyltransferase pro...    30   8.8  
AB007903-1|BAA23715.3| 1404|Homo sapiens KIAA0443 protein.             30   8.8  

>BC114552-1|AAI14553.1| 1395|Homo sapiens G protein-coupled receptor
           associated sorting protein 1 protein.
          Length = 1395

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +2

Query: 410 VYQAVPRL*WSMDDL---FHPGNGHRSTHGIHTSAQKEANSTEAVSEEMESWLSSVIG 574
           V ++V  L WS D++   FHPGN  + ++     A +EAN+        E +++S  G
Sbjct: 195 VDKSVSSLFWSGDEVTAKFHPGNRVKDSNRSMHMANQEANTMSRSQTNQELYIASSSG 252


>BC068507-1|AAH68507.1|  778|Homo sapiens chromosome 11 open reading
           frame 63 protein.
          Length = 778

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -2

Query: 274 SNFVPLDFFFSQILLVTVHGCANTLSTNE*TFNKKQHEFLFLYLQLQFVKSLDM 113
           + F P    F ++L     GC + L+ N+   +K Q E  F Y QL  +  +D+
Sbjct: 440 NTFAPPKQAFDKVLSKNSTGCDSGLNVNKERGHKDQEEKRFSYQQLHTLSDMDL 493


>BC063284-1|AAH63284.1|  797|Homo sapiens CAS1 domain containing 1
           protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 16/72 (22%), Positives = 33/72 (45%)
 Frame = +3

Query: 144 RYKNKNSCCFLLNVHSFVESVFAQPCTVTSNICEKKKSSGTKFESFIXXXXXXXXXXFYY 323
           RY+  +SC +LL+   F+     QP +   +  +  ++     +  I           +Y
Sbjct: 42  RYRGNDSCEYLLSSGRFLGEKVWQPHSCMMHKYKISEAKNCLVDKHIAFIGDSRIRQLFY 101

Query: 324 SFLQIMDSNYKE 359
           SF++I++  +KE
Sbjct: 102 SFVKIINPQFKE 113


>AL035427-1|CAB55683.1| 1395|Homo sapiens G protein-coupled receptor
           associated sorting protein 1 protein.
          Length = 1395

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +2

Query: 410 VYQAVPRL*WSMDDL---FHPGNGHRSTHGIHTSAQKEANSTEAVSEEMESWLSSVIG 574
           V ++V  L WS D++   FHPGN  + ++     A +EAN+        E +++S  G
Sbjct: 195 VDKSVSSLFWSGDEVTAKFHPGNRVKDSNRSMHMANQEANTMSRSQTNQELYIASSSG 252


>AK027207-1|BAB15691.1|  724|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23554 fis, clone LNG09359. ).
          Length = 724

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -2

Query: 274 SNFVPLDFFFSQILLVTVHGCANTLSTNE*TFNKKQHEFLFLYLQLQFVKSLDM 113
           + F P    F ++L     GC + L+ N+   +K Q E  F Y QL  +  +D+
Sbjct: 386 NTFAPPKQAFDKVLSKNSTGCDSGLNVNKERGHKDQEEKRFSYQQLHTLSDMDL 439


>AF397424-1|AAK97479.2|  797|Homo sapiens C7ORF12 protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 16/72 (22%), Positives = 33/72 (45%)
 Frame = +3

Query: 144 RYKNKNSCCFLLNVHSFVESVFAQPCTVTSNICEKKKSSGTKFESFIXXXXXXXXXXFYY 323
           RY+  +SC +LL+   F+     QP +   +  +  ++     +  I           +Y
Sbjct: 42  RYRGNDSCEYLLSSGRFLGEKVWQPHSCMMHKYKISEAKNCLVDKHIAFIGDSRIRQLFY 101

Query: 324 SFLQIMDSNYKE 359
           SF++I++  +KE
Sbjct: 102 SFVKIINPQFKE 113


>AF355594-1|AAL33538.1|  797|Homo sapiens O-acetyltransferase
           protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 16/72 (22%), Positives = 33/72 (45%)
 Frame = +3

Query: 144 RYKNKNSCCFLLNVHSFVESVFAQPCTVTSNICEKKKSSGTKFESFIXXXXXXXXXXFYY 323
           RY+  +SC +LL+   F+     QP +   +  +  ++     +  I           +Y
Sbjct: 42  RYRGNDSCEYLLSSGRFLGEKVWQPHSCMMHKYKISEAKNCLVDKHIAFIGDSRIRQLFY 101

Query: 324 SFLQIMDSNYKE 359
           SF++I++  +KE
Sbjct: 102 SFVKIINPQFKE 113


>AB007903-1|BAA23715.3| 1404|Homo sapiens KIAA0443 protein.
          Length = 1404

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +2

Query: 410 VYQAVPRL*WSMDDL---FHPGNGHRSTHGIHTSAQKEANSTEAVSEEMESWLSSVIG 574
           V ++V  L WS D++   FHPGN  + ++     A +EAN+        E +++S  G
Sbjct: 204 VDKSVSSLFWSGDEVTAKFHPGNRVKDSNRSMHMANQEANTMSRSQTNQELYIASSSG 261


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,669,043
Number of Sequences: 237096
Number of extensions: 1825739
Number of successful extensions: 3662
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3662
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)