Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20654
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 134 2e-30
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 130 2e-29
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 98 2e-19
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 96 8e-19
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 95 1e-18
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 91 2e-17
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 90 5e-17
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 87 4e-16
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 85 2e-15
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 84 3e-15
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 82 1e-14
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 80 4e-14
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 80 6e-14
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 79 1e-13
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 78 2e-13
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 78 2e-13
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 78 2e-13
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 78 2e-13
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 77 3e-13
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 77 4e-13
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 77 5e-13
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 77 5e-13
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 76 7e-13
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 76 9e-13
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 76 9e-13
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 74 3e-12
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 74 3e-12
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 73 5e-12
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 73 5e-12
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 73 7e-12
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 73 7e-12
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 73 9e-12
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 73 9e-12
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 73 9e-12
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 73 9e-12
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 72 1e-11
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 72 2e-11
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 72 2e-11
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 71 2e-11
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 71 2e-11
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 71 3e-11
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 71 3e-11
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 71 4e-11
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 70 5e-11
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 70 5e-11
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 70 5e-11
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 70 5e-11
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 70 6e-11
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 70 6e-11
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 70 6e-11
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 70 6e-11
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 70 6e-11
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 69 8e-11
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 69 8e-11
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 69 8e-11
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 69 8e-11
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 69 8e-11
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 69 8e-11
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 69 1e-10
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 69 1e-10
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 69 1e-10
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 69 1e-10
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 69 1e-10
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 69 1e-10
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 68 2e-10
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 68 2e-10
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 68 3e-10
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 68 3e-10
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 68 3e-10
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 68 3e-10
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 67 3e-10
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 67 3e-10
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 67 3e-10
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 67 3e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 67 3e-10
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 67 4e-10
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 67 4e-10
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 67 4e-10
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 67 4e-10
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 67 4e-10
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 6e-10
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 66 6e-10
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 66 6e-10
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 8e-10
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 66 8e-10
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 66 8e-10
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 66 8e-10
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 66 8e-10
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 66 1e-09
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 66 1e-09
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 66 1e-09
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 65 1e-09
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 65 1e-09
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 65 1e-09
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 65 2e-09
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 65 2e-09
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 65 2e-09
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 65 2e-09
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 2e-09
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 65 2e-09
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 65 2e-09
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 65 2e-09
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 65 2e-09
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 65 2e-09
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 65 2e-09
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 64 2e-09
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 64 2e-09
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 64 2e-09
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 2e-09
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 64 2e-09
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 64 3e-09
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 64 3e-09
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 64 3e-09
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 64 3e-09
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 64 3e-09
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 64 3e-09
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 64 3e-09
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 64 3e-09
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 64 4e-09
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 64 4e-09
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 64 4e-09
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 64 4e-09
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 64 4e-09
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 63 5e-09
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 63 5e-09
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 63 5e-09
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 63 5e-09
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 63 5e-09
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 63 5e-09
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 63 7e-09
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 63 7e-09
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 62 9e-09
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 62 9e-09
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 62 9e-09
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 62 9e-09
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 9e-09
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 62 9e-09
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 1e-08
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 1e-08
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 62 1e-08
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 62 1e-08
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 62 1e-08
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 1e-08
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 62 1e-08
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 62 1e-08
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 62 1e-08
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 62 1e-08
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 62 1e-08
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 62 1e-08
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 62 1e-08
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 62 2e-08
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 2e-08
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 62 2e-08
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 62 2e-08
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 62 2e-08
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 62 2e-08
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 62 2e-08
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 62 2e-08
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 62 2e-08
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 62 2e-08
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 62 2e-08
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 61 2e-08
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 2e-08
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 61 2e-08
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 61 2e-08
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 61 2e-08
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 61 2e-08
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 61 3e-08
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 61 3e-08
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 61 3e-08
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 61 3e-08
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 61 3e-08
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 61 3e-08
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 61 3e-08
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 60 4e-08
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 60 4e-08
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 60 4e-08
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 60 4e-08
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 60 4e-08
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 60 5e-08
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 60 5e-08
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 60 5e-08
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 60 5e-08
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 60 5e-08
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 5e-08
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 60 5e-08
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 60 5e-08
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 60 5e-08
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 60 5e-08
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 60 5e-08
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 60 5e-08
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 60 7e-08
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 60 7e-08
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 60 7e-08
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 60 7e-08
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 60 7e-08
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 60 7e-08
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 60 7e-08
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 60 7e-08
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 59 9e-08
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 59 9e-08
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 59 9e-08
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 59 9e-08
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 59 9e-08
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 59 9e-08
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 59 9e-08
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 59 9e-08
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 59 1e-07
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 59 1e-07
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 59 1e-07
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 59 1e-07
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 59 1e-07
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 59 1e-07
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 59 1e-07
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 59 1e-07
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 58 2e-07
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 2e-07
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 58 2e-07
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 58 2e-07
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 58 2e-07
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 58 2e-07
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 58 2e-07
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 58 2e-07
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 58 2e-07
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 58 2e-07
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 58 2e-07
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 58 2e-07
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 58 2e-07
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 58 2e-07
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 58 2e-07
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 58 2e-07
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 2e-07
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 58 2e-07
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 58 2e-07
UniRef50_Q54CH6 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 58 2e-07
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 58 2e-07
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 58 2e-07
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 58 3e-07
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 58 3e-07
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 58 3e-07
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 58 3e-07
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 58 3e-07
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 58 3e-07
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 58 3e-07
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 58 3e-07
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 58 3e-07
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 58 3e-07
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 57 4e-07
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 57 4e-07
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 57 4e-07
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 57 4e-07
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 57 4e-07
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 57 4e-07
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 57 4e-07
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 57 4e-07
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 57 5e-07
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 57 5e-07
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 57 5e-07
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 57 5e-07
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 5e-07
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 57 5e-07
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 57 5e-07
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 57 5e-07
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 57 5e-07
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 57 5e-07
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 57 5e-07
UniRef50_A0CUN8 Cluster: Chromosome undetermined scaffold_28, wh... 57 5e-07
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 57 5e-07
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 57 5e-07
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 57 5e-07
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 57 5e-07
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 56 6e-07
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 56 6e-07
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 56 6e-07
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 56 6e-07
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 56 6e-07
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 56 6e-07
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 6e-07
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 56 6e-07
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 56 6e-07
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 56 6e-07
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 56 6e-07
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 56 6e-07
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 56 8e-07
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 8e-07
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 56 8e-07
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 56 8e-07
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 56 8e-07
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 56 8e-07
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 56 8e-07
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 56 8e-07
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 56 1e-06
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 56 1e-06
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 56 1e-06
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 56 1e-06
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 56 1e-06
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 56 1e-06
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 56 1e-06
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 56 1e-06
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 56 1e-06
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 56 1e-06
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 56 1e-06
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 56 1e-06
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 56 1e-06
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 56 1e-06
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 55 1e-06
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 55 1e-06
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 55 1e-06
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 55 1e-06
UniRef50_Q014T4 Cluster: Chromosome 07 contig 1, DNA sequence; n... 55 1e-06
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 55 1e-06
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 55 1e-06
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 55 1e-06
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 55 1e-06
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 55 1e-06
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 55 2e-06
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 55 2e-06
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 55 2e-06
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 55 2e-06
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 55 2e-06
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 55 2e-06
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 55 2e-06
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 55 2e-06
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 55 2e-06
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 55 2e-06
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 55 2e-06
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 55 2e-06
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 55 2e-06
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 54 2e-06
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 54 2e-06
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 54 2e-06
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 54 2e-06
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 54 2e-06
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 54 2e-06
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 54 2e-06
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 54 2e-06
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 54 2e-06
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 54 2e-06
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 54 2e-06
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 54 2e-06
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 54 2e-06
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 54 2e-06
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 54 2e-06
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 54 2e-06
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 54 3e-06
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 54 3e-06
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 54 3e-06
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 54 3e-06
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 54 3e-06
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 54 3e-06
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 54 3e-06
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 54 3e-06
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 54 3e-06
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 54 3e-06
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 54 3e-06
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 54 3e-06
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 54 3e-06
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 54 3e-06
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 54 3e-06
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 54 3e-06
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 54 4e-06
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 54 4e-06
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 54 4e-06
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 54 4e-06
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 54 4e-06
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 54 4e-06
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 54 4e-06
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 54 4e-06
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 54 4e-06
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 54 4e-06
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 54 4e-06
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 54 4e-06
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 53 6e-06
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 53 6e-06
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 53 6e-06
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 53 6e-06
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 53 6e-06
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 53 6e-06
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 53 6e-06
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 53 6e-06
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 53 6e-06
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 53 6e-06
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 53 6e-06
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 53 6e-06
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 53 6e-06
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 53 6e-06
UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1; ... 53 6e-06
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 53 6e-06
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 53 6e-06
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 53 6e-06
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 53 6e-06
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 53 6e-06
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 53 6e-06
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 53 6e-06
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 53 6e-06
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 53 8e-06
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 53 8e-06
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 53 8e-06
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 53 8e-06
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 53 8e-06
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 53 8e-06
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 53 8e-06
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 53 8e-06
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 53 8e-06
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 53 8e-06
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 53 8e-06
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 53 8e-06
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 53 8e-06
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 53 8e-06
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 52 1e-05
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 52 1e-05
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 52 1e-05
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 52 1e-05
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 52 1e-05
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 52 1e-05
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 52 1e-05
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 52 1e-05
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 52 1e-05
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 52 1e-05
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 52 1e-05
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 52 1e-05
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 52 1e-05
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 52 1e-05
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 52 1e-05
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 52 1e-05
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 52 1e-05
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 52 1e-05
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 52 1e-05
UniRef50_Q4N4Z2 Cluster: ATP-dependent RNA helicase, putative; n... 52 1e-05
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 52 1e-05
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 52 1e-05
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 52 1e-05
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 52 1e-05
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 52 1e-05
UniRef50_P15424 Cluster: ATP-dependent RNA helicase MSS116, mito... 52 1e-05
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 52 1e-05
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 52 2e-05
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 2e-05
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 52 2e-05
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 52 2e-05
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 52 2e-05
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 52 2e-05
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 52 2e-05
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 52 2e-05
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 52 2e-05
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 52 2e-05
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 52 2e-05
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 52 2e-05
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 52 2e-05
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 52 2e-05
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 52 2e-05
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 51 2e-05
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 51 2e-05
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 134 bits (324), Expect = 2e-30
Identities = 63/84 (75%), Positives = 75/84 (89%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I+GRDVIAQ+QSGTGKTATFSIS+LQ +D +RE QALILAPTRELA QIQK ++ALGD+
Sbjct: 73 IKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDY 132
Query: 436 LNAKCHACIGGTNVREDIRQLESG 507
+N +CHACIGGTNV EDIR+L+ G
Sbjct: 133 MNVQCHACIGGTNVGEDIRKLDYG 156
Score = 84.6 bits (200), Expect = 2e-15
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HVV GTPGRV+DMI RR+L IK+ VLDEADEML++GFK+QI+DV++ L QV+L+
Sbjct: 158 HVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 217
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 146 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAI 69
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 130 bits (315), Expect = 2e-29
Identities = 59/83 (71%), Positives = 75/83 (90%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQIQKV++ALGD+
Sbjct: 68 IKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDY 127
Query: 436 LNAKCHACIGGTNVREDIRQLES 504
+ A CHACIGGTNVR ++++L++
Sbjct: 128 MGATCHACIGGTNVRNEMQKLQA 150
Score = 93.1 bits (221), Expect = 6e-18
Identities = 43/68 (63%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = +2
Query: 65 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 238
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 239 RAIMPSSK 262
RAI+P K
Sbjct: 62 RAIIPCIK 69
Score = 91.9 bits (218), Expect = 1e-17
Identities = 40/60 (66%), Positives = 51/60 (85%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
H+VVGTPGRV+DM+ RR L IK+FVLDEADEMLSRGFKDQI+++F+ L+ +QV+LL
Sbjct: 154 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLL 213
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = +1
Query: 253 FIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 432
F +G DVI QAQSGTGKTATF ILQQ++ + +CQAL+LAPTRELAQQI+KV+ ALGD
Sbjct: 46 FCKGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQALVLAPTRELAQQIEKVMRALGD 105
Query: 433 HLNAKCH 453
HLN K +
Sbjct: 106 HLNVKIY 112
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 95.9 bits (228), Expect = 8e-19
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I G+DV+AQAQSGTGKT TF+I LQ+ID + R+ Q +ILAP RELA+QI VV +G +
Sbjct: 91 ILGKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQY 150
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
LN + CIGGT+ +E + + GV
Sbjct: 151 LNIEAFCCIGGTSTQETREKCKQGV 175
Score = 65.3 bits (152), Expect = 1e-09
Identities = 25/59 (42%), Positives = 41/59 (69%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+++ TPGR+ DM+ + L A ++L V+DEAD+ML +GF D ++ KM+ D+Q+ L
Sbjct: 176 HIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDNFAEILKMVPGDIQIAL 234
Score = 63.3 bits (147), Expect = 5e-09
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +2
Query: 125 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKP 89
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 95.1 bits (226), Expect = 1e-18
Identities = 42/57 (73%), Positives = 49/57 (85%), Gaps = 1/57 (1%)
Frame = +2
Query: 95 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPSSK 262
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+P K
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIK 66
Score = 85.4 bits (202), Expect = 1e-15
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 414
I+G DVIAQAQSGTGKTATF ISILQ+IDTS++E QALILAPTRELAQQ K+
Sbjct: 65 IKGHDVIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
IQG DVIAQAQSGTGKT+ F++++ Q +DTS RE QALI +PTRELA Q +KV++A+GD
Sbjct: 311 IQGHDVIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDS 370
Query: 436 LNAKCH 453
+N + H
Sbjct: 371 VNIQAH 376
Score = 60.1 bits (139), Expect = 5e-08
Identities = 24/41 (58%), Positives = 34/41 (82%)
Frame = +2
Query: 131 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLP 309
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 89.8 bits (213), Expect = 5e-17
Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +2
Query: 74 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 250
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 251 PSSK 262
P K
Sbjct: 68 PCIK 71
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 402
I+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQ
Sbjct: 70 IKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I GRD++A+A++GTGKTA F I L+++ + + QALI+ PTRELA Q +VV LG H
Sbjct: 81 ITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKH 140
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
C GGTN+R+DI +L V
Sbjct: 141 CGISCMVTTGGTNLRDDILRLNETV 165
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
E H++VGTPGRV D+ +R+ + LF++DEAD+MLSR FK I + L Q
Sbjct: 163 ETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQS 222
Query: 681 IL 686
+L
Sbjct: 223 LL 224
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +2
Query: 155 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
TF+D LK ELL GI+ GFEKPS IQ+ AI
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAI 77
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 84.6 bits (200), Expect = 2e-15
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HVV GTPGRV+DMI RR+L IK+ VLDEADEML++GFK+QI+DV++ L QV+L+
Sbjct: 137 HVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLI 196
Score = 80.6 bits (190), Expect = 3e-14
Identities = 46/84 (54%), Positives = 57/84 (67%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I+GRDVIAQ+QSGTGKTATFS+S+LQ +D Q L+ ALGD+
Sbjct: 73 IKGRDVIAQSQSGTGKTATFSVSVLQCLDI-----QGLL----------------ALGDY 111
Query: 436 LNAKCHACIGGTNVREDIRQLESG 507
+N +CHACIGGTNV EDIR+L+ G
Sbjct: 112 MNVQCHACIGGTNVGEDIRKLDYG 135
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 146 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAI 69
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/87 (45%), Positives = 55/87 (63%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A +QG+DVI QAQ+GTGKTA F + I++++ R QAL+L PTRELA Q+ + + +G
Sbjct: 39 ALLQGKDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIG 98
Query: 430 DHLNAKCHACIGGTNVREDIRQLESGV 510
H K A GG ++ IR L GV
Sbjct: 99 RHARVKTIAIYGGQSIERQIRSLRFGV 125
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VV+GTPGR+ D + R L + +++ VLDEADEML GF + I + + A+ Q +L
Sbjct: 127 VVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAERQTLL 184
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 155 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
TF D+ L E++L+ + GFE+PS IQ +AI
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAI 37
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ GRD++A+A++GTGKTA+F I L +I+TS+ QALIL PTRELA Q +V LG H
Sbjct: 71 LTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAH 130
Query: 436 L-NAKCHACIGGTNVREDIRQLESGV 510
+ N + GGT +R+DI +L+ V
Sbjct: 131 IPNLQVMITTGGTTLRDDILRLQQPV 156
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H++VGTPGR+ D+ ++ N +FV+DEAD++LS F I + + QV+L
Sbjct: 157 HILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTLALCPQERQVML 215
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +2
Query: 83 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAI 67
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 80.2 bits (189), Expect = 4e-14
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ GRD++A+A++GTGK+ + I +L++ID QAL+L PTRELA Q+ ++ I + H
Sbjct: 124 LSGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKH 183
Query: 436 L-NAKCHACIGGTNVREDIRQLESGV 510
L K A GGTN+R+DI +L+ V
Sbjct: 184 LGGVKVMATTGGTNLRDDIMRLDETV 209
Score = 38.3 bits (85), Expect = 0.18
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
F+D LK ELL GI+ G+EKPS IQ+ +I
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESI 120
Score = 34.3 bits (75), Expect = 2.9
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRRALHANTIKLFVLDE 602
E HVV+ TPGR+ D++ + + +++ V+DE
Sbjct: 207 ETVHVVIATPGRILDLMKKGVAKVDKVQIMVMDE 240
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 79.8 bits (188), Expect = 6e-14
Identities = 43/62 (69%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ-IQKVVIALGD 432
I+G+D IAQAQSGTGKTATFSI+ LQ IDTS QALILAPTRELAQQ I ++ LG
Sbjct: 69 IKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPTRELAQQTITRIFFILGV 128
Query: 433 HL 438
+L
Sbjct: 129 NL 130
Score = 79.4 bits (187), Expect = 8e-14
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
E VVVGTPGRV D+I ++ L + +KLF+LDEADEML RGFKDQI+ +F+ L D+QV
Sbjct: 218 EGVQVVVGTPGRVLDLIQKKTLVTDHLKLFILDEADEMLGRGFKDQINKIFQNLPHDIQV 277
Query: 681 IL 686
L
Sbjct: 278 AL 279
Score = 37.9 bits (84), Expect = 0.23
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
+KV++ LG+ L +AC GGT+ +ED ++L GV
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGV 220
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 438
+G+D+I QAQ+GTGKTA F+I IL +D SI Q L++APTRELA QI + LG +
Sbjct: 37 EGKDIIGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYT 96
Query: 439 NAKCHACIGGTNVREDIRQLESGV 510
+K +GG + + L SGV
Sbjct: 97 CSKIALILGGVSYEKQKAALNSGV 120
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
++VV TPGR+ D++ + + + IK F LDEADE+L GF ++I + L
Sbjct: 121 NIVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLKIGFYNEIIKIMNKL 171
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
F MN+K E+L+ + GFEKP+ IQ+ A++P
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLP 33
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G+DV+ AQ+GTGKTA F++ +L + +RE Q L+LAPTRELAQQ+ V + H
Sbjct: 41 LEGKDVLGLAQTGTGKTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKH 100
Query: 436 -LNAKCHACIGGTNVREDIRQLESGVMW 516
N K + GG++ R L+ G W
Sbjct: 101 ESNVKVASIYGGSDFGSQFRALKQGPQW 128
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = +3
Query: 516 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVGTPGRV D I R L I+ VLDEADEML GF D + V + Q+ L
Sbjct: 129 VVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIAL 185
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
IQGRDV+ Q TGKT S+S+L D S+++ Q LIL TR+L ++ +++ALG
Sbjct: 57 IQGRDVVIQNFRSTGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKF 116
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
LN HAC G ++++DI ++ GV
Sbjct: 117 LNVSIHACSEGNSIQDDISVVQQGV 141
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
+V+GTP RV++++ R+ + +K+ +LDEADEML K ++ +FK L Q +L+
Sbjct: 143 IVLGTPDRVFELVQRKEISFAHLKMIILDEADEMLIDESKSLVYCIFKYLPPKPQYVLV 201
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/70 (32%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Frame = +2
Query: 146 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP--SSKDAML-SLKPSQELEKLLLS 316
+ TF+ M L++ELLRGI A+GF +P +QQRA++P +D ++ + + + + + LS
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 317 LYRFYNKSIQ 346
+ ++ S++
Sbjct: 80 VLSIFDLSVK 89
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 77.8 bits (183), Expect = 2e-13
Identities = 33/83 (39%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ GRD++A+A++GTGK+ + I +L+++D QA+++ PTRELA Q+ ++ I + H
Sbjct: 116 LSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 175
Query: 436 L-NAKCHACIGGTNVREDIRQLE 501
+ AK A GGTN+R+D+ +L+
Sbjct: 176 MGGAKVMATTGGTNLRDDVMRLD 198
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HVV+ TPGR+ D+I + + +++ VLDEAD++LS+ F + L + Q++L
Sbjct: 202 HVVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLLSQDFVQIMEAFILTLPKNRQILL 260
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 IQG-RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 432
I+G RD++ QAQ+GTGKTA F I IL+ ID S R QALILAPTRELA Q+ + + ++
Sbjct: 37 IEGKRDIVGQAQTGTGKTAAFGIPILETIDESSRNTQALILAPTRELAIQVAEEIDSIKG 96
Query: 433 HLNAKCHACIGGTNVREDIRQLESGV 510
GG ++ IR+L GV
Sbjct: 97 SKRLNVFPVYGGQSIDRQIRELRRGV 122
Score = 62.5 bits (145), Expect = 9e-09
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VVGTPGR+ D I+RR + + VLDEADEML+ GF D + ++ K +S + +++L
Sbjct: 124 IVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTEKRMLL 181
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++GRDV+ AQ+GTGKTA F++ IL ID +R QAL+L PTRELAQQ+ + + G
Sbjct: 44 LEGRDVVGLAQTGTGKTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRG 103
Query: 436 LNA-KCHACIGGTNVREDIRQLESG 507
+ + + GG ++R+ ++ L G
Sbjct: 104 MGGLRILSIFGGADMRQQLKSLREG 128
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
E H+VV TPGR+ D I RR++ I VLDEADEML GF D + + + +V
Sbjct: 127 EGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKERKV 186
Query: 681 IL 686
L
Sbjct: 187 AL 188
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/56 (67%), Positives = 47/56 (83%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIA 423
I+G DVIAQ+QSGTGKTAT+ I+ LQ+ID + QA+ILAPTRELA QIQKVV++
Sbjct: 56 IKGFDVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +3
Query: 534 RVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
RV+D++ RRA+ A I+L VLDEAD+ML GFKDQIH++F L +VQ ILL
Sbjct: 112 RVFDVLARRAVSAKAIRLLVLDEADQMLGNGFKDQIHEIFCKLPTNVQAILL 163
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2
Query: 149 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPSSK 262
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+P K
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIK 57
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 76.6 bits (180), Expect = 5e-13
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++GRDVI QAQ+GTGKTA F + +LQ+ID + R QAL+L PTRELA Q+ + AL H
Sbjct: 40 LEGRDVIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKH 99
Query: 436 L-NAKCHACIGGTNVREDIRQLESG 507
L + + GG + L G
Sbjct: 100 LRGVRILSVYGGQPIEPQASALRRG 124
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
VVVGTPGR+ D I R L +++ VLDEADEML GF++ I + + VQ
Sbjct: 127 VVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWVQ 181
Score = 37.1 bits (82), Expect = 0.40
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2
Query: 149 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
VE+F D+ L+EELL+ I GF +PS IQ AI
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAI 36
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 76.6 bits (180), Expect = 5e-13
Identities = 33/82 (40%), Positives = 52/82 (63%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QG+D+I QAQ+GTGKTA F + +L ++DT Q +++APTRELA Q+ + + +G H
Sbjct: 37 LQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH 96
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
+ GG ++ IR L+
Sbjct: 97 KRVRILPIYGGQDINRQIRALK 118
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H++VGTPGR+ D I R+ L ++ VLDEADEML+ GF + I + + Q +L
Sbjct: 122 HIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL 180
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 76.2 bits (179), Expect = 7e-13
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT--SIRECQALILAPTRELAQQIQKVVIALG 429
+ G+DVI QA++GTGKTA FSI IL+Q+D+ R+ QA+++ PTRELA Q+ L
Sbjct: 79 LNGKDVIGQARTGTGKTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLA 138
Query: 430 DHLNAKCHACIGGTNVREDIRQLESG 507
+ + GG N+ +RQLE+G
Sbjct: 139 RGVPTEIAVLSGGKNMNRQLRQLENG 164
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
+VVGTPGRV+D + R L N + VLDEAD ML GF+ QI + + + Q +LL
Sbjct: 167 LVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIERIMRKCPRNRQTLLL 225
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 75.8 bits (178), Expect = 9e-13
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A ++GRDV+ QAQ+GTGKTA F++ +L ++D RE Q L+LAPTRELAQQ+ + G
Sbjct: 42 ALLEGRDVLGQAQTGTGKTAAFALPLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYG 101
Query: 430 DHLNA-KCHACIGGTNVREDIRQLESG 507
+ + + GG RE + L G
Sbjct: 102 RGVKGLEVLSLCGGQEYREQLSGLRRG 128
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/55 (47%), Positives = 32/55 (58%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
V+VGTPGRV D + R +L + + VLDEADEML GF D + V D Q
Sbjct: 131 VIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDVKRVVSDTPKDAQ 185
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 75.8 bits (178), Expect = 9e-13
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G D+I Q+ GT T T ILQ++D + ECQAL+L PT +LA + Q V+ LG L+
Sbjct: 85 GLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLS 142
Query: 442 AKCHACIGGTNVREDIRQLESGV 510
AK HA GGT+ ED + L +GV
Sbjct: 143 AKAHAFCGGTSAHEDQQILSTGV 165
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/55 (54%), Positives = 37/55 (67%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
V VGTP V M+ RAL + I++FVLDEADE+L RGFKDQIH + + L Q
Sbjct: 167 VAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQ 220
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG-D 432
+ G+DV+ +AQ+GTGKTA F + L +IDTSI++ Q ++LAPTRELA Q+ + + + G D
Sbjct: 50 LAGKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKD 109
Query: 433 HLNAKCHACIGGTNVREDIRQLESG 507
+ GG + +QLE G
Sbjct: 110 MKGLRVATLYGGQSYGPQFQQLERG 134
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVVGTPGR+ D + R++L + +++ VLDEADEML+ GF + I + + Q+ L
Sbjct: 137 VVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCL 194
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QG+D++ A++G+GKTA F+I ILQ + T+ + AL+LAPTRELA QI++ ALG
Sbjct: 133 LQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIKETFDALGSS 192
Query: 436 LNAKCHACIGGTNVREDIRQL 498
+ + IGG ++ E R L
Sbjct: 193 MGLRSVCIIGGMSMMEQARDL 213
Score = 35.9 bits (79), Expect = 0.93
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HV++ TPGR+ D + + ++ V+DE D M+ + I + K + + ++
Sbjct: 218 HVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIPSHQRITY 277
Query: 687 L 689
L
Sbjct: 278 L 278
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A + G DVI QAQ+GTGKTA F I +++++ T R QALIL PTRELA Q+ + L
Sbjct: 39 AILAGGDVIGQAQTGTGKTAAFGIPVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLS 97
Query: 430 DHLNAKCHACIGGTNVREDIRQLESGV 510
H + GG ++ I+ L+ GV
Sbjct: 98 KHKKIRTLPIYGGQSIVHQIKALKQGV 124
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VV+GTPGR+ D + R+ L + + +LDEADEML GF D I + + + + Q +L
Sbjct: 126 VVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQTLL 183
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 73.3 bits (172), Expect = 5e-12
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G DV+ +AQ+GTGKTA F+I +L+ ++ R QALI+ PTREL Q+ + + +G +
Sbjct: 39 LDGMDVVGEAQTGTGKTAAFAIPVLENLEAE-RVPQALIICPTRELCLQVSEEIKRIGKY 97
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
+ K A GG ++ I QL GV
Sbjct: 98 MKVKVLAVYGGQSIGNQIAQLRRGV 122
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HV+V TPGR+ D I R + I VLDEADEML+ GF D I + + Q +L
Sbjct: 123 HVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTML 181
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 72.9 bits (171), Expect = 7e-12
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ GRDV+ Q+Q+GTGKTA FS+ IL+++D + QA++L PTRELA Q+ + +
Sbjct: 38 LSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGN 97
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
+ A GG ++ + QL+ GV
Sbjct: 98 SGLRTLAIYGGQSIDRQMLQLKRGV 122
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/59 (50%), Positives = 37/59 (62%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VVGTPGRV D++ R L + +K FVLDEADEMLS GF D + + D Q L
Sbjct: 123 HIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQDRQTAL 181
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 438
+ RD++A AQ+GTGKTA F +LQ ID S + Q LI+APTREL QI + H+
Sbjct: 38 EDRDMVALAQTGTGKTAAFGFPLLQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHI 97
Query: 439 -NAKCHACIGGTNVREDIRQLESG 507
+ A GG+N++E R++ G
Sbjct: 98 KGVRVVAVYGGSNIQEQAREISRG 121
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
+VV TPGR+ DM+ RR + + VLDEADEML+ GF + I ++
Sbjct: 124 IVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYEDITNI 169
Score = 33.9 bits (74), Expect = 3.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 155 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
TFD + L LL+ I GFE PS IQ+ AI
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAI 32
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 72.5 bits (170), Expect = 9e-12
Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QGRD IA AQ+GTGKTA F++ ILQ + I QALILAPTRELA Q+ + L +
Sbjct: 41 LQGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKY 100
Query: 436 -LNAKCHACIGGTNVREDIRQLESG 507
N GG ++QL SG
Sbjct: 101 QRNVTIAVLCGGQEYGRQLKQLRSG 125
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVVGTPGR+ D I + L N +K F+LDEADEML GF + + + + L Q+ L
Sbjct: 128 VVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQMAL 185
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 72.5 bits (170), Expect = 9e-12
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIA-LGDHL 438
GRD++ QAQ+GTGKTA F++ +L+++++ + Q L+LAPTRELA Q+ A H
Sbjct: 108 GRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHP 167
Query: 439 NAKCHACIGGTNVREDIRQLESGV 510
+ K A GGT+ R I L GV
Sbjct: 168 HLKVLAVYGGTDFRSQISTLRRGV 191
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVVGTPGRV D + + L + + VLDEADEML GF D + + + L + QV+L
Sbjct: 193 VVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDDVEWILEQLPKERQVVL 250
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 72.5 bits (170), Expect = 9e-12
Identities = 35/82 (42%), Positives = 54/82 (65%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G+DVI ++++GTGKTA F+I IL++I R AL++ PTRELA Q+ + AL H +
Sbjct: 57 GKDVIVRSKTGTGKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRD 116
Query: 442 AKCHACIGGTNVREDIRQLESG 507
A GG ++ E +++LE+G
Sbjct: 117 LSVVAVYGGASMGEQLQKLEAG 138
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++VGTPGR+YD I RR L + + LDEADEML+ GF +++ + L D Q +L
Sbjct: 141 IIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNLPKDCQQLL 198
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 72.5 bits (170), Expect = 9e-12
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-ECQALILAPTRELAQQIQKVVIALGD 432
+ GRDVI AQ+GTGKTA F + ILQ++ R +A+I+ PTRELA+QIQ V+ ALG
Sbjct: 36 LDGRDVIGIAQTGTGKTAAFVLPILQRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGK 95
Query: 433 HLNAKCHACIGGTNVREDIRQLESGV 510
+ + GG + I++L GV
Sbjct: 96 YTGLRSVTLYGGVGYQGQIQRLRRGV 121
Score = 40.7 bits (91), Expect = 0.033
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+ V PGR+ D + R L + + +LDEAD+M GF + + ++ A Q +L
Sbjct: 123 IAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQRQTML 180
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC--QALILAPTRELAQQIQKVVIALG 429
++G D+I QAQ+GTGKTA F +I+ D S ++ +ALILAPTRELA Q+ + ++ LG
Sbjct: 39 LEGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLG 98
Query: 430 DHLNAKCHACIGGTNVREDIRQLESGV 510
H GG + IR L++GV
Sbjct: 99 KHEKLSVLPIYGGQPIDRQIRALKNGV 125
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VVGTPGRV D+I R++L N I VLDEADEML+ GF D + ++ K L D Q +L
Sbjct: 127 IVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDRQTLL 184
Score = 37.9 bits (84), Expect = 0.23
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
FDD+ LKE LL+ I GFE+PS IQ +I
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESI 35
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/82 (43%), Positives = 54/82 (65%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QG+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PTRELA QI + ++ LG
Sbjct: 80 LQGKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEEILKLGRF 138
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
K GG +++ LE
Sbjct: 139 GRIKTICMYGGQSIKRQCDLLE 160
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +3
Query: 516 VVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++ TPGR+ D + + + ++ VLDE+DEML GF D I ++FK L Q +L
Sbjct: 166 MIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLDMGFLDDIEEIFKFLPNTRQTLL 222
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-N 441
++V+ AQ+GTGKTA F + +LQQI+ S+++ Q L+L PTREL QQ+ K + ++
Sbjct: 40 KNVVGVAQTGTGKTAAFGLPVLQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVR 99
Query: 442 AKCHACIGGTNVREDIRQLES 504
A GG + E I++LE+
Sbjct: 100 IHTEAVYGGKKIEEQIKKLET 120
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H++V TPGR+ D+I R+A++ + +K +LDEADEML+ GF I + K+ + +L
Sbjct: 123 HILVATPGRLLDLIARKAVNLSNLKYLILDEADEMLNMGFLPDIDKIMKIAKPTARKLL 181
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++GRD + +AQ+GTGKTA FS+ +L +++ S + QA+++APTRELA Q+ + LG +
Sbjct: 61 LEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQN 120
Query: 436 LNA-KCHACIGGTNVREDIRQLESG 507
+ K GG ++ + +R L+SG
Sbjct: 121 IKGLKVLEIYGGASILDQMRALKSG 145
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VVGTPGRV D+ITR LH + F+LDEADEML GF D + + + Q +L
Sbjct: 147 HIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVL 205
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/81 (48%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
D I AQ+GTGKTA F + +L ID + RE QALILAPTRELAQQI + + HL
Sbjct: 53 DFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKL 112
Query: 445 KCHACIGGTNVREDIRQLESG 507
GG N+ IR + G
Sbjct: 113 NVVPVFGGANIMNQIRDIRRG 133
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 641
++V TPGR+ D++ RR + + +K VLDEADEML+ GFK+ I
Sbjct: 136 IIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKEDI 178
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 70.9 bits (166), Expect = 3e-11
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G+D+I QA++G+GKTA FS+ IL +I+ QALIL PTRELA Q+ + LG
Sbjct: 82 LAGKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRR 141
Query: 436 L-NAKCHACIGGTNVREDIRQLESGV 510
L K A GG + RE LE+GV
Sbjct: 142 LPGLKVLAMTGGQSGREQADALENGV 167
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VVGTPGR+ D + R + + +K VLDEAD+ML GF D+I V + L Q +L
Sbjct: 169 IVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRDLPGSRQTVL 226
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 FIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 432
F++G+++ ++ +GTGKTA+F + IL++I+ + R QA+I+APTRELA QI + G
Sbjct: 35 FLEGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGS 94
Query: 433 HL-NAKCHACIGGTNVREDIRQLE 501
+ N IGG ++R+ I++L+
Sbjct: 95 RIENLVIAPLIGGADMRDQIKRLK 118
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
+VVGTPGRV D + R+ L + ++ +LDEADEML GFK++I +F+ +S DVQ+
Sbjct: 122 IVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEIDALFERVSPDVQI 177
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I+G+D+I ++++GTGKTA F + +L++I R +ALIL PTRELA Q+ + L H
Sbjct: 64 IEGKDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKMLAKH 123
Query: 436 LNAKCHACIGGTNVREDIRQLESG 507
K A GG ++++ LE G
Sbjct: 124 KGLKIAAIYGGASMKQQEDALEEG 147
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++VGTPGRV+D I R L + VLDEADEML++GF +++ + L QV+L
Sbjct: 150 IIVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTRQVLL 207
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPS--SKDAMLSLK 283
FDDMNL E + + G+ P+ +Q RA P+ KD ++ K
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSK 74
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRELAQQIQKVVI 420
++G D++ AQ+GTGKTA FS+ ILQ + R+ + LIL PTRELA QI + +
Sbjct: 39 LEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIE 98
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
A HLN K GG +R L+ GV
Sbjct: 99 AYSKHLNMKHAVIFGGVGQNPQVRALQGGV 128
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
+++ TPGR+ D+ ++ L + +++FVLDEAD ML GF I + +L
Sbjct: 130 ILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLL 179
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI--QKVVIALG 429
IQ +D++ +Q+GTGKT + + I ++IDTS RE QALILAPT EL QI Q ++A
Sbjct: 37 IQNKDLLINSQTGTGKTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQVELLAKN 96
Query: 430 DHLNAKCHACIGGTNVREDIRQLES 504
L+ A IG N+++ I+ +++
Sbjct: 97 AELSVTSLALIGEVNIQKQIKNIKA 121
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
H+V+G+ GRV D+I ++ L ++ IK VLDE D +L+ I D+ + D Q+I
Sbjct: 125 HIVIGSCGRVLDLIKQKKLKSHNIKTIVLDEVDNLLNGKNITCIEDIIRTTLRDRQII 182
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/84 (38%), Positives = 57/84 (67%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 438
QG++++ Q+Q+G+GKTATFSI L ++ + + + +I++PTRELA Q + + +LG
Sbjct: 56 QGKNIMFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG--- 112
Query: 439 NAKCHACIGGTNVREDIRQLESGV 510
A AC+GG ++ D++ L+ G+
Sbjct: 113 -ANTRACVGGNSLGADVKALQKGI 135
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H V GTPGR+ ++ + A ++ VLDEADEML+ FK I D+ + L +VI+
Sbjct: 136 HCVSGTPGRILQLLKEHNIQAEKVQSVVLDEADEMLT-SFKSTIMDILQKLPHAQKVIV 193
Score = 39.9 bits (89), Expect = 0.057
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +2
Query: 143 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
+V T++ M LK EL+ I G+EKPS IQQRAI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAI 51
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/82 (40%), Positives = 51/82 (62%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ +DVI QAQ+GTGKTA F I ++++I+ QA+++APTRELA Q+ + + +G
Sbjct: 38 LSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQD 97
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
AK GG ++ IR L+
Sbjct: 98 KRAKVLPIYGGQDIGRQIRALK 119
Score = 59.7 bits (138), Expect = 7e-08
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++VGTPGR+ D I RR + N + V+DEADEML+ GF D I + + ++ Q +L
Sbjct: 123 NIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLL 181
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G D+I +A+SGTGKTA F I L+ ID I Q +ILAPTRE+A QI++V+ +LG +
Sbjct: 61 GFDLIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIK 120
Query: 442 A-KCHACIGGTNVREDIRQLES 504
K + IGG + D ++L +
Sbjct: 121 GLKVESFIGGVAMDIDRKKLSN 142
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
CH+ +G PGRV +I + L + ++LFVLDEAD+++ F+ I+ ++ L + QVI
Sbjct: 143 CHIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEESFQKDINYIYAKLPPNRQVI 201
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 155 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
TF M L +++L G+ GF KPS IQ ++I
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI 55
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G D+I QA+SGTGKT FS L + Q LILAPTRE+A QI V+ A+G +
Sbjct: 100 GLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKME 159
Query: 442 A-KCHACIGGTNVREDIRQLE 501
+CH IGGT + +D +L+
Sbjct: 160 GLECHVFIGGTPLSQDKTRLK 180
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVI 683
CH+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++QI+ ++ L A Q++
Sbjct: 182 CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 241
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 69.7 bits (163), Expect = 6e-11
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQKVV 417
+QGRDV+A AQ+GTGKTA + + ++Q + +T+ + +ALILAPTRELAQQ+ +
Sbjct: 38 LQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNL 97
Query: 418 IALGDHLNAKCHACIGGTNVREDIRQLESGV 510
H GGT++R QL GV
Sbjct: 98 KQYAQHTELAIVTVYGGTSIRVQQEQLAKGV 128
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++ TPGR+ D + + N +++ VLDEAD ML GF I + K + + Q +L
Sbjct: 130 ILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMPEERQTLL 187
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++ +DVI Q+ +G+GKT + + I Q+IDTS RE QA+ILAPT ELA QI K + L +
Sbjct: 38 LENKDVIGQSPTGSGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGN 97
Query: 436 --LNAKCHACIGGTNVREDIRQLE 501
++ IG NV+ I +L+
Sbjct: 98 SKVSVTSTPIIGNANVKRQIEKLK 121
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HV+VG+ GR+ ++I ++ + A+TIK V+DE D++L I DV K D Q+++
Sbjct: 125 HVIVGSSGRILELIKKKKISAHTIKTIVVDEGDKLLDHSNLSSIKDVIKTTMRDRQLMV 183
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G D+I QA+SGTGKT FS L + Q LILAPTRE+A QI V+ A+G +
Sbjct: 99 GLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKME 158
Query: 442 A-KCHACIGGTNVREDIRQLE 501
+CH IGGT + +D +L+
Sbjct: 159 GLECHVFIGGTPLSQDKTRLK 179
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQVI 683
CH+ VG+PGR+ +I L+ +I+LF+LDEAD++L G F++QI+ ++ L A Q++
Sbjct: 181 CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 240
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 69.3 bits (162), Expect = 8e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 444
+D+I QA+SGTGKT FS+ L+ ID + Q LILAPTRE+A QIQ + A+G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 445 -KCHACIGGTNVREDIRQLE 501
+ H IGGT D ++L+
Sbjct: 64 LRSHVFIGGTLFGPDRQKLK 83
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
CH+ VGTPGR+ +I L TI+LFVLDEAD++L F++Q++ ++ LS + Q++
Sbjct: 85 CHIAVGTPGRIKQLIEYEVLKTGTIRLFVLDEADKLLDDTFQEQVNWIYNHLSDNKQMLA 144
Query: 687 L 689
L
Sbjct: 145 L 145
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 69.3 bits (162), Expect = 8e-11
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQKVVIA 423
+G D+ A AQ+GTGKTA FS+ ++QQ+ S + +ALI APTRELA+QI + A
Sbjct: 37 RGHDIFATAQTGTGKTAAFSLPLIQQLLESGKSASRKTARALIFAPTRELAEQIADNIKA 96
Query: 424 LGDHLNAKCHACIGGTNVREDIRQLESGV 510
+ N A GG + R LE+GV
Sbjct: 97 YTKYTNLSVAAIFGGRKMSSQERMLENGV 125
Score = 36.3 bits (80), Expect = 0.71
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ + I + I+ V DEAD +L GF + + + + + Q+++
Sbjct: 127 ILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFINAVRKIMLDVETNPQIMM 184
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G +++ QA +GTGKTA + + +LQ+I ++ Q LI+ PTRELA Q+ V LG +
Sbjct: 37 LEGHNLVGQAPTGTGKTAAYLLPVLQRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKY 95
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
L + A GG + IR L GV
Sbjct: 96 LKVRALAVYGGQAIERQIRGLRQGV 120
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V+VGTPGR+ D I R+ A IK+ +LDEADEML GF D I + L+ Q +L
Sbjct: 122 VIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLL 179
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 69.3 bits (162), Expect = 8e-11
Identities = 35/58 (60%), Positives = 41/58 (70%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 438
R VIAQAQSGTGKT FSI +L +ID S + QAL+LAPTRELA QI V +G +
Sbjct: 131 RHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRI 188
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+ + TPGR D+I L K+ VLDEAD+MLS F +Q++D+ + DVQ++L
Sbjct: 215 HICICTPGRALDLIVSGHLRVQNFKMAVLDEADQMLSDNFIEQVNDIMEYFPEDVQILL 273
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 89 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAI 122
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/82 (40%), Positives = 51/82 (62%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+Q +DVI QAQ+GTGKTA F I I+++++ QAL++APTRELA Q+ + + +G
Sbjct: 37 LQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGAV 96
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
+ GG ++ IR L+
Sbjct: 97 KRVRVLPIYGGQDIERQIRALK 118
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HV+VGTPGR+ D I R L + VLDEADEML+ GF + I + + A+ Q +L
Sbjct: 122 HVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLL 180
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ GRDV+ AQ+G+GKTA FS+ +LQ +D ++ Q L+LAPTRELA Q+ + + H
Sbjct: 41 LNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKH 100
Query: 436 L-NAKCHACIGGTNVREDIRQLESG 507
+ A GG +R L G
Sbjct: 101 MRGVNVVALYGGQRYDVQLRALRQG 125
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VVGTPGR+ D + R L + + VLDEADEML GF + + + + Q L
Sbjct: 128 IVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTAL 185
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPTRELAQQIQKV 414
A + +D++ AQ+GTGKTA F++ ++QQ I R +A+IL+PTRELA QI +
Sbjct: 136 AVLNSKDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEA 195
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
++ G L IGG +R+ +R L GV
Sbjct: 196 FVSFGKRLPLNFTHAIGGAPIRKQMRDLSKGV 227
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ D++ ++ L + K VLDEAD+ML GF + + ++ D Q +L
Sbjct: 229 ILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVNKDRQTLL 286
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIAL 426
+ GRDV+ AQ+GTGKT F+ ILQ++ I R ++LIL PTRELA QIQ+ A
Sbjct: 36 LAGRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAY 95
Query: 427 GDHLNAKCHACIGGTNVREDIRQLESGV 510
G HL + GG + + +L+ GV
Sbjct: 96 GKHLPLRSAVIFGGVGQQPQVDKLKKGV 123
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
++V TPGR+ D+ + + + +++FVLDEAD ML GF + V K+L A Q +
Sbjct: 125 ILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVKQTL 181
Score = 36.3 bits (80), Expect = 0.71
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 155 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPS 256
TF ++ L + +L+ + G+EKPS IQ++AI P+
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPA 35
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG
Sbjct: 124 LEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKP 183
Query: 436 LNAKCHACIGGTNVREDIRQL 498
+ KC +GG ++ R+L
Sbjct: 184 ITLKCSVIVGGRSLIHQAREL 204
Score = 49.6 bits (113), Expect = 7e-05
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRR----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
HVVV TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+ +S Q
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQ 268
Query: 678 VILL 689
+LL
Sbjct: 269 TLLL 272
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VV+GTPGRV D I R LH +++ +F+LDEAD+ML GF++ I D+F+ D Q IL
Sbjct: 127 VVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDRQTIL 184
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 402
+ G+DV QAQ+GTGKTA F I I++++D + QAL+L+PTRELA Q
Sbjct: 40 LDGKDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPTRELAIQ 88
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G D+I AQ+G+GKTA F+I IL ++ A ILAPTRELAQQI++ +LG
Sbjct: 116 LEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSL 175
Query: 436 LNAKCHACIGGTNVREDIRQL 498
+ + +GG N+ + R L
Sbjct: 176 MGVRSTCIVGGMNMMDQARDL 196
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
H+++ TPGR+ D + + +K V+DEAD +L F + + K++
Sbjct: 201 HIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKII 252
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 128 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPS 256
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P+
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPA 115
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G D+I QA+SGTGKT F+ L + Q L+LAPTRE+A QI VV+A+G +
Sbjct: 63 GLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAME 122
Query: 442 A-KCHACIGGTNVREDIRQLE 501
+CH IGG + +D + L+
Sbjct: 123 GLECHVFIGGRPISQDKQHLK 143
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML----SRGFKDQIHDVFKMLSADV 674
CH+ +G+PGR+ +I AL ++I+LFVLDEAD++L S F++QI+ ++ L A+
Sbjct: 145 CHIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANK 204
Query: 675 QVILL 689
Q++ L
Sbjct: 205 QMLAL 209
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G DVIAQA +G+GKTA F + +LQ++D ++ QAL+L PTRELA Q+ K + L
Sbjct: 61 LRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKLATG 120
Query: 436 L-NAKCHACIGGTNVREDIRQLES 504
+ N K GG + + LE+
Sbjct: 121 IPNMKLVVLTGGMPLGPQLASLEA 144
Score = 59.3 bits (137), Expect = 9e-08
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
HVVVGTPGR+ ++ +RALH ++ VLDEAD ML GF++ I ++
Sbjct: 148 HVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREI 194
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 68.5 bits (160), Expect = 1e-10
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++GRD+IA A++G+GKTA+F+I IL Q+ A+IL PTRELA QI + A+G
Sbjct: 39 LKGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAP 98
Query: 436 LNAKCHACIGG 468
+N C IGG
Sbjct: 99 MNVNCSVVIGG 109
Score = 33.9 bits (74), Expect = 3.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHA-NTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
H++V TPGR+ + A K VLDEAD +L F+ +I + + L
Sbjct: 124 HIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHL 175
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QGRD+IA A++G+GKTA F + ILQ++ + ALILAPTREL QI + ++A+G
Sbjct: 86 LQGRDIIALAETGSGKTAAFGLPILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGT 145
Query: 436 LNAKCHACIGG 468
L +GG
Sbjct: 146 LGVTVVTLVGG 156
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGF 629
HVVVG+PGRV D + + + ++K+ VLDEAD +LS F
Sbjct: 171 HVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDF 211
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIAL 426
A ++G D+IA A++G+GKTA + + I+ +++T E ++LI+ PTRELA Q KV L
Sbjct: 46 AILRGNDIIAMARTGSGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNEL 105
Query: 427 GDHLNAKCHACIGGTNVREDIRQLESG 507
G N K IGG+ + + L SG
Sbjct: 106 GKLTNLKASLIIGGSKLSDQFDNLSSG 132
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ ++ + N +++ DEAD M GF +Q+ D+ +ML Q++L
Sbjct: 135 IIVATPGRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVSDIMRMLPPTRQILL 192
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G+D+ QAQ+GTGKTA F I ++ +D SI + Q+LIL PTRELA Q+ + L
Sbjct: 38 GKDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQSLILCPTRELALQVCTELKKLSKFKK 97
Query: 442 A-KCHACIGGTNVREDIRQLESG 507
+ A GG ++ IR L++G
Sbjct: 98 GLRVLAVYGGESIERQIRDLKAG 120
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VVGTPGR+ D + RR L+A+ + +LDEADEML+ GF++ I + L + Q +L
Sbjct: 122 HIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEERQTVL 180
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQKV 414
A + G+DV+A AQ+GTGKTA F++ +LQ++ S + L+L PTRELA+Q+ +
Sbjct: 34 AVLGGKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVSSNRARVLVLVPTRELAEQVLQS 93
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
IA G L+ + A GG ++ + +L GV
Sbjct: 94 FIAYGKGLDLRFLAAYGGVSINPQMMKLRKGV 125
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V+V TPGR+ D+ + A+ + ++ VLDEAD ML GF +++ VF L A Q +L
Sbjct: 127 VLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQRQTLL 184
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 67.7 bits (158), Expect = 3e-10
Identities = 38/84 (45%), Positives = 50/84 (59%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QGRD + QA++GTGKTA F + IL + + ALILAPTRELA QI+ +
Sbjct: 7 LQGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRDFARY 63
Query: 436 LNAKCHACIGGTNVREDIRQLESG 507
LN + A GGT V D++ L G
Sbjct: 64 LNVRTFAFYGGTKVFGDLKVLRGG 87
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
VV+GTPGR+ D+I R AL + ++ FVLDE D ML FK+ I ++ L + QV +
Sbjct: 91 VVIGTPGRIKDLIERGALKTDDVRYFVLDEVDVMLDMNFKEDIDFIYSQLPEEKQVFFV 149
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 67.7 bits (158), Expect = 3e-10
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIALG 429
+ GRDV+ QAQ+GTGKTA F++ ++ +D + R+ Q L+LAPTRELA Q+ + A
Sbjct: 42 LSGRDVLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFA 101
Query: 430 DHLNAKCHACI-GGTNVREDIRQLESGV 510
++ ACI GG IR L+ GV
Sbjct: 102 KNVPNLDVACIYGGQEYGSQIRALKQGV 129
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVVGT GRV D I + L + ++ VLDEADEML GF D + V +S + Q +L
Sbjct: 131 VVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVKFVLSHVSDECQRLL 188
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 438
Q D+I QAQ+GTGKTA F + I+Q+I+ +++ QALIL PTRELA Q+ + + +
Sbjct: 39 QDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGR 98
Query: 439 NAKCHACIGGTNVREDIRQLESGV 510
GG + + R L+ GV
Sbjct: 99 GITTVTLYGGAPIMDQKRALKKGV 122
Score = 46.0 bits (104), Expect = 9e-04
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VV TPGR I L ++++ VLDEADEML+ GF + + V K D V++
Sbjct: 124 LVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDDRTVLM 181
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIR-ECQALILAPTRELAQQIQKVVIALGDHL 438
G DVI AQ+GTGKTA +++ I+Q++ ++ R + L++APTRELA QI +LG
Sbjct: 38 GHDVIGLAQTGTGKTAAYALPIIQKMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRA 97
Query: 439 NAKCHACIGGTNVREDIRQLESGV 510
+ + GG N+ + IR+L SGV
Sbjct: 98 RIRECSIYGGVNMDQQIRRLRSGV 121
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVV PGR+ D I R + ++ ++DEAD M GF+ I + K L Q +L
Sbjct: 123 VVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLL 180
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++ +D+I Q+Q+G+GKT + + I Q+ID+S RE QALILAPT EL QI K + L +
Sbjct: 38 LKNKDIIGQSQTGSGKTLAYLLPIFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSN 97
Query: 436 --LNAKCHACIGGTNVREDIRQLE 501
L IG N+ I +L+
Sbjct: 98 AGLTINSTVMIGEVNIVRQIEKLK 121
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H++VG+ GRV ++I R+ + ++TIK V+DEAD +L + + DV K D Q+++
Sbjct: 125 HIIVGSTGRVLELIKRKKISSHTIKTIVIDEADMLLDQNNLAGVKDVIKTTMRDRQLMI 183
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 438
+ DV+A AQ+GTGKTA F + +LQQID R Q+LIL PTREL QI + ++
Sbjct: 39 ENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYI 98
Query: 439 NA-KCHACIGGTNVREDIRQLESGV 510
+ K GG+++ IR L+ GV
Sbjct: 99 DGLKVLPVYGGSSIDSQIRSLKRGV 123
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
H++V TPGR+ D++ R+ + +T+ V+DEADEML+ GF D I+ +
Sbjct: 124 HIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSINAI 170
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 67.3 bits (157), Expect = 3e-10
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 8/95 (8%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQ----ALILAPTRELAQQI 405
+ + G+DV+A AQ+GTGKTA F++ +L ++ +TS+ + ALI+APTRELA QI
Sbjct: 38 SILAGKDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRELAMQI 97
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
+ V G +L + GG N+ I L++GV
Sbjct: 98 DESVRKYGKYLALRTAVVFGGINIEPQIAALQAGV 132
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ D++ ++A++ + ++ VLDEAD ML GF I V +LS Q ++
Sbjct: 134 ILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSPQRQSLM 191
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRELAQQIQKVVIA 423
+QG+D++A AQ+GTGKTA F + I++ + + + +L+L PTRELA Q++ A
Sbjct: 59 LQGKDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKA 118
Query: 424 LGDHLNAKCHACIGGTNVREDIRQLESGV 510
+L + A GG ++R +++L+ GV
Sbjct: 119 YTKYLALRSDAVFGGVSIRPQVKRLQGGV 147
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
++V TPGR+ D+I ++ + + +K+ VLDEAD ML GF I V + L + Q
Sbjct: 149 ILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKNRQ 203
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIALG 429
+ G+D++A AQ+GTGKT F + +Q + T R+ +ALIL PTRELA QI + ++ +
Sbjct: 37 LAGKDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEALLQIA 96
Query: 430 DHLNAKCHACIGGTNVREDIRQLESG 507
+ +GG N R +R + G
Sbjct: 97 RGTGIRAAVAVGGLNERSQLRDIRGG 122
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++VV TPGR+YD ++R ++ T+++ +LDE+D ML GF I + + A+ Q +L
Sbjct: 124 NIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAERQTLL 182
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G+D+IA++ +GTGKT + I IL +ID + QA+ILAP+ ELA QI + +
Sbjct: 45 LEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELAMQIHQTIEKWTKD 104
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
N IGG N++ I L+
Sbjct: 105 NNISSEPLIGGANIKRQIENLK 126
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 67.3 bits (157), Expect = 3e-10
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDT------SIRECQALILAPTRELAQQIQK 411
A ++GRD++A AQ+GTGKTA F++ +LQ + T R +ALIL PTRELA QI +
Sbjct: 34 AVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGE 93
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
V +LN + GG ++ + +L GV
Sbjct: 94 NVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGV 126
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 665
V+V TPGR+ D+ + A+ + +++ VLDEAD ML GF IHD+ ++L+
Sbjct: 128 VLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGF---IHDIRRVLT 175
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A + G+DV QA++G+GKTA F + +LQQID S+ + QAL+L PTRELA Q+ + L
Sbjct: 36 AILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLA 95
Query: 430 DHL-NAKCHACIGG 468
L N K GG
Sbjct: 96 RFLPNTKILTLCGG 109
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H++V TPGR+ D + + + + + V+DEAD ML GF D I DV + A Q +L
Sbjct: 124 HIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLL 182
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 66.9 bits (156), Expect = 4e-10
Identities = 35/83 (42%), Positives = 47/83 (56%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I G+DV+ QA++GTGKTA F +S+L Q+ + L+L TRELA QI+ LG
Sbjct: 73 IHGKDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKF 132
Query: 436 LNAKCHACIGGTNVREDIRQLES 504
N K A GG DI L++
Sbjct: 133 TNFKVKAVYGGVEESVDIHTLKT 155
Score = 37.5 bits (83), Expect = 0.31
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRR--ALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKMLSADVQV 680
H++V TPGR +I + + I+ F++DE D +LS + + ++F L QV
Sbjct: 159 HILVATPGRCLSLIKAKPSVIETQNIEYFIIDECDRVLSSNKMRSDVQNIFYELPRKKQV 218
Query: 681 IL 686
++
Sbjct: 219 MM 220
Score = 36.7 bits (81), Expect = 0.53
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +2
Query: 155 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
+F+D +LK++LLR + GFE+PS +Q + I
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCI 69
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/79 (41%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G D+I +++SGTGKT FS L+ ++T+ Q LIL PTRE+A QI+ V+ ++G H+N
Sbjct: 61 GFDLIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVN 120
Query: 442 A-KCHACIGGTNVREDIRQ 495
K + IGG + +D+++
Sbjct: 121 GLKIESFIGGRPLEDDLKK 139
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
CH+ VG PGRV ++ AL N +KLFVLDEAD+++ F+ I++++ L Q+I+
Sbjct: 143 CHIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEESFQSDINEIYNSLPPRKQMIV 202
>UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 598
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
Frame = +1
Query: 253 FIQGRDVIAQAQSGTGKTATFSISI----LQQIDTSIREC-QALILAPTRELAQQIQKVV 417
FI+ D+ +AQ+G+GKT F + I ++Q+ T+ + C AL++APTRELA+QI ++
Sbjct: 43 FIKNHDLAVEAQTGSGKTLAFLLPIFNVLIKQVKTANKNCVYALVIAPTRELAKQIHEIA 102
Query: 418 IALGDHL---NAKCHACIGGTNVREDIRQLES 504
+ L HL CIGG + + D+ ++S
Sbjct: 103 VQLASHLENNQFSIQLCIGGVSTKIDVSNIQS 134
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
D I A +GTGKTA F I +++ ID+++++ QAL+L+PTRELA Q+ + + LG +
Sbjct: 84 DFIGLASTGTGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVR 143
Query: 448 CHACIGGTNVREDIRQLESG 507
GG + R I ++ G
Sbjct: 144 VVTIYGGASYRTQIDGIKRG 163
Score = 56.0 bits (129), Expect = 8e-07
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 671
H+VV TPGR+ D + ++ + ++K VLDEADEMLS GFK+ + + D
Sbjct: 165 HIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEMLSMGFKEALETILSATQPD 218
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQIQKVV 417
A ++G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q+ + V
Sbjct: 38 AILEGQDVMAAAQTGTGKTAGFTLPLLEILSKGENAQSNQVRALVLTPTRELAAQVAESV 97
Query: 418 IALGDHLNAKCHACIGGTNVREDIRQLESG 507
G HL+ K GG + + L G
Sbjct: 98 KNYGQHLSLKSTVVFGGVKINPQMMALRRG 127
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/51 (41%), Positives = 36/51 (70%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 665
+++ TPGR+ D+ ++A+ + +++ VLDEAD ML GF IHD+ K+L+
Sbjct: 130 ILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGF---IHDIKKILA 177
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 66.9 bits (156), Expect = 4e-10
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQ--IDTSIRECQ---ALILAPTRELAQQIQKVVI 420
+ GRD++ A++G+GKTA F+I +LQ + IR AL+LAPTRELAQQI+K V
Sbjct: 153 LSGRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQ 212
Query: 421 ALGDHLNA-KCHACIGGTNVREDIRQLESGV 510
A L + K +GGTN+ + +L +GV
Sbjct: 213 AFSRSLESLKNCIVVGGTNIEKQRSELRAGV 243
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+ V TPGR D + + + I VLDEAD ML GF+ QI ++ + L Q +L
Sbjct: 245 IAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPEKHQTLL 302
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 66.5 bits (155), Expect = 6e-10
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIALG 429
++G+D++A AQ+GTGKTA F + I+Q + R ALIL PTRELAQQ+ +
Sbjct: 42 LEGKDLLAAAQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQYA 101
Query: 430 DHLNAKCHACIGGTNVREDIRQLESG 507
+H + + GGT++ +LE G
Sbjct: 102 EHTDLRIVCVYGGTSIGVQKNKLEEG 127
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
E +++ TPGR+ D + ++ + + VLDEAD ML GF + + + L D Q+
Sbjct: 126 EGADILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPNDKQI 185
Query: 681 IL 686
+L
Sbjct: 186 ML 187
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 66.5 bits (155), Expect = 6e-10
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
D++A A++GTGKTA F + +LQ ID + QA+ILAPTREL QQI +I+ +H +
Sbjct: 43 DIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAEHTSQV 102
Query: 448 CHACI-GGTNVREDIRQLE 501
A + GG ++ I +L+
Sbjct: 103 SIATLCGGIPIKPQIERLK 121
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 656
E H++V TPGR+ D++ R A+ +I F+LDEADEM++ K+ + + K
Sbjct: 122 EATHIIVATPGRLADLVKREAIDIKSISYFILDEADEMVT-ALKEGLDSIIK 172
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 438
Q +++IAQ+QSGTGKTATF +++L +ID + CQ L +APTREL QI +V I + +
Sbjct: 86 QPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFM 145
Query: 439 N 441
N
Sbjct: 146 N 146
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +2
Query: 149 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
V++F+D+ LK ELL GI + GF KPS+IQ+RA+
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERAL 79
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 66.1 bits (154), Expect = 8e-10
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI-QKVVIALGD 432
+ G+D+I QA++GTGKT F + IL++ID + QALI+APTRELA QI ++ L
Sbjct: 40 LSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQ 99
Query: 433 HLNAKCHACIGGTNVREDIRQLE 501
+ A GG +V + +R+L+
Sbjct: 100 REDINVLAIYGGQDVAQQLRKLK 122
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VV TPGR+ D I R + + + VLDEAD+ML GF I D+ Q +L
Sbjct: 126 HIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTML 184
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 66.1 bits (154), Expect = 8e-10
Identities = 30/80 (37%), Positives = 49/80 (61%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
++IA+A++GTGKTA F + ++Q++ + AL+L PTRELA Q+ + +L +
Sbjct: 86 NIIAKARTGTGKTAAFGLPLIQELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPR 145
Query: 448 CHACIGGTNVREDIRQLESG 507
H GG ++ E +R LE G
Sbjct: 146 IHTVYGGVSIAEQLRNLEQG 165
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++VGT GRV D I R +L + ++ F+LDEADEML+ GF + I +F + D +V++
Sbjct: 168 IIVGTTGRVIDHIERGSLELSYLRYFILDEADEMLNMGFVEDIESIFSHANKDARVLM 225
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 66.1 bits (154), Expect = 8e-10
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQKVV 417
+ GRD+I +AQ+GTGKTA F I++LQ++ + E +ALILAPTRELA QI K
Sbjct: 133 LAGRDIIGKAQTGTGKTAAFLITVLQKLLTVKPEERFASEPRALILAPTRELAMQIAKDA 192
Query: 418 IALGDHLNAKCHACIGGTNVREDIRQLESGVM 513
L + + +GG + + QLE+ V+
Sbjct: 193 DGLSKYADLNIVTVLGGVDYDKQKEQLENEVV 224
Score = 41.9 bits (94), Expect = 0.014
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGF 629
VVV TPGR+ D + + ++ + +++ V+DEAD ML GF
Sbjct: 226 VVVATPGRLLDYLQQGIVYLDQVEMLVIDEADRMLDMGF 264
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/82 (41%), Positives = 49/82 (59%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 444
RDV+AQAQ+GTGKT F + IL++++ QALI+ PTRELA QI L +
Sbjct: 41 RDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTRELAIQITAETKKLAEVKGI 100
Query: 445 KCHACIGGTNVREDIRQLESGV 510
A GG +V + +R+L+ +
Sbjct: 101 NILAAYGGQDVEQQLRKLKGSI 122
Score = 52.8 bits (121), Expect = 8e-06
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
H+++GTPGR+ D + R+ ++ + + VLDEAD+ML GF + D+
Sbjct: 123 HIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDI 169
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 66.1 bits (154), Expect = 8e-10
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+Q RDVI AQ+G+GKTA F+I ILQ + + + A +LAPTRELA QI + V ALG
Sbjct: 139 LQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVEALGST 198
Query: 436 LNAKCHACIGGTNV 477
+ + +GG ++
Sbjct: 199 IGVRSATIVGGMDM 212
Score = 34.3 bits (75), Expect = 2.9
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HV+V TPGR+ D + + ++ V+DEAD +L F I + + + + + +L
Sbjct: 224 HVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRTML 283
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/84 (40%), Positives = 47/84 (55%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G D+I QAQ+GTGKTA F + +L ID S + QAL+LAPTRELAQQ+ +
Sbjct: 90 LAGSDLIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQVGDALATYSGD 149
Query: 436 LNAKCHACIGGTNVREDIRQLESG 507
GG++ + + L G
Sbjct: 150 DGRNVLVVYGGSSYQAQVGGLRRG 173
Score = 59.3 bits (137), Expect = 9e-08
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVVGTPGR+ D+I + +L + +K VLDEADEMLS GF D I + D Q +L
Sbjct: 176 VVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKDRQTML 233
Score = 33.5 bits (73), Expect = 5.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 155 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
+F D NLK +L+ + GF +P+ IQ++AI
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAI 86
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A ++G+DV+ +AQ+GTGKTA F + L +ID S+++ Q L++ PTRELA Q+ + +
Sbjct: 41 ALLEGQDVLGEAQTGTGKTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAEALEGFA 100
Query: 430 DHLNAKCHACI-GGTNVREDIRQLESG 507
+ A + GG ++ L+ G
Sbjct: 101 AKMRGVGVATVYGGAPFGPQVKALKQG 127
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
+VVGTPGR+ D++ + L + +K+ VLDEADEML+ GF + I + K + Q
Sbjct: 130 IVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIEDIETILKAVPNTAQ 184
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLN 441
+D+IAQAQ+GTGKTA F I +L++ID + +A+I+ PTRELA QI + + +L
Sbjct: 57 KDLIAQAQTGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKR 116
Query: 442 AKCHACIGGTNVREDIRQLESGV 510
K GG ++ + + LE GV
Sbjct: 117 VKITTLYGGQSLEKQFKDLEKGV 139
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VVGTPGR+ D + R L + ++ VLDEAD ML GF D + ++ K + + L
Sbjct: 141 IVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGENKRTFL 198
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 152 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
E F+D L EE+L I G+EKP+ I Q+ ++P
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEI-QKIVLP 50
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSI-----RECQALILAPTRELAQQIQKVVI 420
++G D++ AQ+GTGKTA F + IL +I + R C+AL+LAPTRELA QI
Sbjct: 92 LEGHDLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAAR 151
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
G IGG R++ESGV
Sbjct: 152 TYGKFTRPSVAVVIGGAKPGPQARRMESGV 181
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ D + + + ++ VLDEAD+ML GF I + L Q ++
Sbjct: 183 LLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQRQAVM 240
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATF---SISILQQIDTSI--RECQALILAPTRELAQQIQKVVI 420
++GRD++ AQ+GTGKTA F SI L++ D I + C+ L+LAPTREL QI
Sbjct: 37 LEGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAASAK 96
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESG 507
G K + +GGT+V +D +L G
Sbjct: 97 DYGALAGLKVQSIVGGTSVNKDRNKLHRG 125
Score = 48.0 bits (109), Expect = 2e-04
Identities = 18/57 (31%), Positives = 38/57 (66%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
+++ TPGR+ D+I ++A + ++++ VLDEAD+ML GF + + +++ + Q +
Sbjct: 128 ILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKERQTL 184
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPTRELAQQIQKVVIA 423
++G D++A+AQ+GTGKTA+F++ I++++ + R +AL+LAPTRELA Q+ +
Sbjct: 39 LRGDDLLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALVLAPTRELAIQVADNTLE 98
Query: 424 LGDHLNAKCHACIGGTNVREDIRQLESG 507
G L + + GG V I++L+ G
Sbjct: 99 YGRDLGMRVISVYGGVPVENQIKRLKRG 126
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ D++ ++A+ ++ VLDEAD ML GF D I + + D Q +L
Sbjct: 129 ILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDYAADDRQTLL 186
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQIQKVVIALGDH 435
D++A AQ+GTGKTA F++ +LQ++ T ++ ++LI+ PTRELA Q+ V
Sbjct: 40 DLLAVAQTGTGKTAAFTLPLLQRLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQ 99
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
LN + A GG + I QL+ GV
Sbjct: 100 LNIRSFAVYGGVRIEPQIAQLQEGV 124
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
E V++ TPGR+ D+ +RALH +++ V DEAD ML GF D + + +L Q
Sbjct: 122 EGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVKRQT 181
Query: 681 IL 686
+L
Sbjct: 182 LL 183
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRELAQQIQKVV 417
A + G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q+ + V
Sbjct: 34 AVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESV 93
Query: 418 IALGDHLNAKCHACIGGTNVREDIRQLESGV 510
G +L + GG + I++L GV
Sbjct: 94 ETYGKYLPLRSAVVFGGVPINPQIQKLRHGV 124
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V+V TPGR+ D++ + + N +++ VLDEAD ML GF I + +L A Q ++
Sbjct: 126 VLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLM 183
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 65.3 bits (152), Expect = 1e-09
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQK 411
A + GRDV+A A +G+GKTA F++ +LQ++ + S + + L+L PTRELAQQ+
Sbjct: 42 AVLSGRDVLAGANTGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVAD 101
Query: 412 VVIALGDHLNA--KCHACIGGTNVREDIRQLESG 507
++ H N K A GG +V ++ L +G
Sbjct: 102 SFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAG 135
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V+V TPGR+ D++ AL N + VLDEAD MLS GF D+++ V + L A Q +L
Sbjct: 138 VLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVLEALPAKKQTLL 195
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRELAQQIQKVV 417
A + G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q+ + V
Sbjct: 34 AVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQVSESV 93
Query: 418 IALGDHLNAKCHACIGGTNVREDIRQLESGV 510
G +L + GG + I++L GV
Sbjct: 94 ETYGKYLPLRSAVVFGGVPINPQIQKLRHGV 124
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V+V TPGR+ D+ ++A+ N +++ VLDEAD ML GF I + ML A Q ++
Sbjct: 126 VLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQNLM 183
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++GRDV+ A++G+GKTA F++ IL ++ AL LAPTRELA Q+ + ALG
Sbjct: 112 LEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAP 171
Query: 436 LNAKCHACIGG 468
L +C A IGG
Sbjct: 172 LGLRCLAAIGG 182
Score = 37.5 bits (83), Expect = 0.31
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTI---KLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
HVVV TPGR+ +I A K VLDEAD +L F++ + +F L Q
Sbjct: 197 HVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSLPKKRQT 256
Query: 681 IL 686
L
Sbjct: 257 FL 258
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/83 (33%), Positives = 54/83 (65%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G D++ QA +GTGKT F+I I++++ + +AL+L PTRELA Q+++ + L +
Sbjct: 35 LEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKY 94
Query: 436 LNAKCHACIGGTNVREDIRQLES 504
+ GGT+V++++ L++
Sbjct: 95 KRLSSYVFYGGTSVKQNLDILQN 117
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/50 (42%), Positives = 34/50 (68%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
+++GTPGR+ D+I R+AL+ + ++ VLDE D+ML GF + I + L
Sbjct: 122 ILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFL 171
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIAL 426
A +QGRDV+ AQ+GTGKTA +++ +LQQ+ + + +ALIL+PTR+LA QI +
Sbjct: 46 AILQGRDVVGLAQTGTGKTAAYALPLLQQLTEGPPGQLRALILSPTRDLADQICVAMNHF 105
Query: 427 GDHLNAKCHACIGG-TNVREDIRQLESGV 510
G + +C GG N + L GV
Sbjct: 106 GRQTHLRCATIYGGKINYTRQYQLLTGGV 134
Score = 41.1 bits (92), Expect = 0.025
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 VVVGTPGRVYDMIT-RRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V PGR+ D++ ++ +K VLDEAD + GF+D I+ + K L Q +L
Sbjct: 136 IIVACPGRLLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPPRRQNLL 194
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G D+I QAQ+GTGKTA F++ +L +ID + RE Q LILAPTRELA Q+
Sbjct: 58 LAGHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQ 117
Query: 436 L-NAKCHACIGGTNVREDIRQLESG 507
L A GG + ++ L G
Sbjct: 118 LPGVGVVAVYGGAPMGPQLKALRQG 142
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ D + R +T+K VLDEADEML GF + + +F L Q +L
Sbjct: 145 ILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFMEDLEVIFAALPESRQTVL 202
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/54 (51%), Positives = 43/54 (79%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 411
A ++GRD+I Q+Q+GTGKT +F + I+Q ++ ++E QA+I+APTRELA QI +
Sbjct: 35 AALKGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTRELAWQIHE 88
Score = 52.4 bits (120), Expect = 1e-05
Identities = 20/58 (34%), Positives = 39/58 (67%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+V+GTPGR+ D+ +AL + +K +++DEAD+ML GF ++ + + L +Q+++
Sbjct: 125 IVIGTPGRILDLFKEQALKPHFVKHYIIDEADQMLDMGFLPEVDRIAQALPEKLQMMV 182
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 438
QG DVI QA++G+GKTA F + IL++ S + QAL+LAPTRELA Q+ + L +
Sbjct: 41 QGTDVIGQARTGSGKTAAFGLPILERCQPS-GKLQALVLAPTRELANQVAQEFELLQGNA 99
Query: 439 NAKCHACIGGTNVREDIRQLESGV 510
GGT++ + + L GV
Sbjct: 100 GLSIVTVYGGTDLEKQAKTLAKGV 123
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++VGTPGRV DM R + N+ K+ LDEAD ML GF I + + +++ Q +L
Sbjct: 125 IIVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFPDIMWIVERMTSRQQTLL 182
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/85 (31%), Positives = 55/85 (64%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G++++ ++++G+GKTA+F+I + + I+ QALI+ PTRELA Q++ + +G
Sbjct: 38 LKGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQALIVVPTRELALQVKDEISDIGRL 97
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
+C A G ++++ I +L+ V
Sbjct: 98 KKVRCSAIFGKQSIKDQIAELKQRV 122
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VV TPGR+ D I R ++ +K V+DEAD+M ++GF +Q+ + L + V L
Sbjct: 123 HIVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLPKEKIVSL 181
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVIAL 426
+ GRD++ QA +GTGKTA F++ +L ++ T QAL+L PTRELA Q+ + +
Sbjct: 92 VAGRDLLGQAATGTGKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRY 151
Query: 427 GDHLNAKCHACIGGTNVREDIRQLESGV 510
G L A+ GG + +R L GV
Sbjct: 152 GRDLGARVLPVYGGAPIGRQVRALVQGV 179
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVV TPGR D + R L + + VLDEADEML GF + I + + Q +L
Sbjct: 181 VVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKRQTVL 238
Score = 36.7 bits (81), Expect = 0.53
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +2
Query: 128 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPP 90
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++GRD+I Q+ SGTGKT + I Q+ SI Q LIL PTREL+ QI+ V L +
Sbjct: 45 LKGRDIIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIY 104
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
+C GG + ED++ L+
Sbjct: 105 TKNSITSCHGGRWLGEDLKNLK 126
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/59 (40%), Positives = 41/59 (69%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H +VGTPGRV ++ +L I+ FVLDEAD ++++ FK I ++++ L++ VQ+I+
Sbjct: 130 HGIVGTPGRVLHLLQIGSLAITKIRTFVLDEADILMNKNFKIDIFNIYRYLNSKVQIII 188
>UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 606
Score = 64.9 bits (151), Expect = 2e-09
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA----LILAPTRELAQQIQKVVIA 423
+ G DV+AQA++GTGKT F + ++Q++ ++ A LIL+PTRELAQQI +V
Sbjct: 102 LAGDDVLAQAKTGTGKTLAFLVPVVQRLLSAPMPPSALTSILILSPTRELAQQINEVAER 161
Query: 424 LGDHLNAK--CHACIGGTNVREDIRQLES 504
+ L+ K + +GGTN+ DI+ L+S
Sbjct: 162 MSTALSKKFGTRSVVGGTNMDRDIKNLKS 190
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHAN--TIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 668
++V TPGR+ D++ + A +K+ VLDEAD +L GF+ ++ +F L A
Sbjct: 195 ILVATPGRLLDLMENGGIKARFAQLKMIVLDEADRLLDAGFRRELVKIFDYLPA 248
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/82 (36%), Positives = 51/82 (62%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G+D+I QA++GTGKTA F I +++ I + + Q L++ PTRELA Q+ + + +G
Sbjct: 37 MEGKDLIGQARTGTGKTAAFGIPMVEAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKV 96
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
+ A GG + R ++ LE
Sbjct: 97 RGIRSVAIYGGQDFRSQVKALE 118
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VVGTPGR+ + + R + + I++ VLDEAD+ML GF D+ + K L Q +L
Sbjct: 122 HIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERRQTLL 180
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 665
H+VVGTPGRV MI L + IKLFV+DEADEML GF++Q+ +F+ ++
Sbjct: 158 HIVVGTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQEQVKSIFRRIT 209
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/82 (43%), Positives = 46/82 (56%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I GRD+ AQAQSGTGKT F+++ LQ D S Q L+LA TRE+A Q LG
Sbjct: 73 IDGRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCF 132
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
+ A+ GG+ + D LE
Sbjct: 133 MGARVALLSGGSPIAADKVALE 154
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +2
Query: 128 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQP 71
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/69 (43%), Positives = 48/69 (69%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 444
R++I Q+QSGTGKTA F++++L ++D +I QA+ +AP+RELA+QIQ+V+ +G
Sbjct: 188 RNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQV 247
Query: 445 KCHACIGGT 471
I G+
Sbjct: 248 GTFLAIPGS 256
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR--RALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVQVI 683
+++GTPG + DM+ R R L I++ VLDEADE+++ +G +Q + ++L +VQ +
Sbjct: 267 ILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGLGEQTFRIKQLLPPNVQNV 326
Query: 684 L 686
L
Sbjct: 327 L 327
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +2
Query: 149 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
V++F ++NL E+L++GI A GF+KPS IQ++A+
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKAL 179
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 438
G D+I +A+SGTGKT F I L+ ID I Q LILAPTRE+A QI +V ++G +
Sbjct: 33 GFDLIMRAKSGTGKTLVFCIISLEMIDIDISSVQVLILAPTREIAVQIAQVFSSVGCEIK 92
Query: 439 NAKCHACIGGTNVREDIRQLES 504
+ K IGG + D +++ +
Sbjct: 93 DLKVEVFIGGLAIENDKKKVNN 114
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
C + VG PGR+ +I + L ++LFVLDEAD+++ F+ I+ +F L QVI
Sbjct: 115 CQIAVGAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETSFQKDINYIFSKLPLSKQVI 173
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI-QKVVIALGD 432
I+G DVI QAQ+GTGKT F I I+++I+ I++ Q+LIL PTREL Q+ +++ L
Sbjct: 38 IKGHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQVYEELKKLLRF 97
Query: 433 HLNAKCHACIGGTNVREDIRQLES 504
+ + GG + + R LE+
Sbjct: 98 YQEIRIAVVYGGESYTKQFRALEA 121
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+++ TPGR D + R + + +K+ LDEADEML GF++ + + K + + Q +L
Sbjct: 124 HLIIATPGRAIDHLERGKIDLSALKILTLDEADEMLKMGFQEALETILKKIPEERQTVL 182
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 64.5 bits (150), Expect = 2e-09
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRE-CQALILAPTRELAQQIQKVVIALG 429
+QG+D++ AQ+GTGKTA FSI ILQ++ T R+ +AL+L PTRELA QI + A G
Sbjct: 36 LQGKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYG 95
Query: 430 DHLNAKCHACIGGTNVREDIRQLESGV 510
+ K GG + L SG+
Sbjct: 96 RYTGLKHAVIFGGVGQKPQTDALRSGI 122
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
++V TPGR+ D+I++ + +++ FVLDEAD ML GF I + K+L A Q +
Sbjct: 124 ILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARRQTL 180
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
+VI QAQ+GTGKTA F I +++++D + QAL+L PTRELA Q+ + +L +
Sbjct: 42 NVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLN 101
Query: 448 CHACIGGTNVREDIRQLESGV 510
GG ++ IR L+ V
Sbjct: 102 LLPVYGGVSIGNQIRALKRRV 122
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VVGTPGR+ D + R L IK V+DEADEML GF + + + + + Q+++
Sbjct: 124 LVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKEKQILM 181
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G DV+ AQ+GTGKTA FS+ +L +IDT+ + QAL+L PTRELA Q+ +
Sbjct: 40 LDGNDVLGLAQTGTGKTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARG 99
Query: 436 L-NAKCHACIGGTNVREDIRQLE 501
+ N GG ++R +R L+
Sbjct: 100 VDNFHVLPIYGGADMRNQLRALK 122
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V+VGTPGRV D + R L + +K VLDEADEML GF + I + + D Q L
Sbjct: 127 VIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIEDIDWILEHTPKDKQTAL 184
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPTRELAQQIQKVVIALG 429
++GRDV+ QA++GTGKTA F I I+++++ + R QALIL PTRELA Q++ + L
Sbjct: 39 LEGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALILTPTRELAVQVRDEIAKLT 98
Query: 430 DHLNAKCHACIGGTNVREDIRQLE 501
A GG +R + +L+
Sbjct: 99 HGQRINVVAVYGGKPLRSQMEKLK 122
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
H+VVGTPGRV D++TRRAL ++ VLDEAD ML GF+ I + + + Q +LL
Sbjct: 126 HIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEERQTLLL 185
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/82 (36%), Positives = 53/82 (64%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G+DVIA++ +GTGKT +++ +L++I + QA+ILAP+REL QI +V+
Sbjct: 39 MDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAG 98
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
+ + IGG NV++ + +L+
Sbjct: 99 SELRAASLIGGANVKKQVEKLK 120
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
H++VGTPGRV+++I + L + +K VLDE D+++ ++ + + K D Q++
Sbjct: 124 HIIVGTPGRVFELIKAKKLKMHEVKTIVLDETDQLVLPEHRETMKQIIKTTLRDRQLL 181
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIALGD 432
+ GRD++A AQ+GTGKT F I L+ + DT Q LIL PTRELA Q+ V L
Sbjct: 62 LDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKG 121
Query: 433 HLNAKCHACIGGTNVREDIRQLESG 507
+GGT+ R I+ + SG
Sbjct: 122 KKLKSAALVMGGTSERNQIQSIRSG 146
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
VVV TPGR+ D + RR + + +++ VLDEAD M+ GF I + + L D Q +
Sbjct: 149 VVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIKRILRALPRDKQTL 205
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 64.1 bits (149), Expect = 3e-09
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSI------RECQALILAPTRELAQQIQKVV 417
++G D++ AQ+GTGKTA F+I ILQ + R+ +AL+LAPTRELA QI +
Sbjct: 36 LEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAESF 95
Query: 418 IALGDHLNAKCHACIGGTNVREDIRQLESGV 510
A G +L + GG R+LE G+
Sbjct: 96 TAYGVNLPLRTLVIFGGVGQAPQTRKLEKGI 126
Score = 42.3 bits (95), Expect = 0.011
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 665
++V TPGR+ D+I + + + ++ FVLDE D+ML G +HDV ++++
Sbjct: 128 ILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLDMG---MLHDVKRIIT 175
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 64.1 bits (149), Expect = 3e-09
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISI----LQQIDT-SIRECQALILAPTRELAQQIQKVVI 420
+ G+DV QAQ+GTGKTATF ISI L Q T +ALILAPTREL QI+K
Sbjct: 36 LTGKDVAGQAQTGTGKTATFLISIFTKLLSQAKTGGEHHPRALILAPTRELVVQIEKDAQ 95
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESG 507
ALG + A GG + + L++G
Sbjct: 96 ALGKYTGFNIQAIYGGVDYMKQRDALKAG 124
Score = 41.5 bits (93), Expect = 0.019
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
+V+GTPGR+ D + ++ ++ V+DEAD M GF + + + L
Sbjct: 127 IVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRL 176
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAL-GDHLNA 444
D+I Q++SGTGKT + I+++Q + +I + A+I+ PTRELA Q+Q L +
Sbjct: 64 DLIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDF 123
Query: 445 KCHACIGGTNVREDIRQL-ESGVM 513
KC A IGGT+V +D +++ ES V+
Sbjct: 124 KCSAFIGGTDVAKDRKRMNESRVI 147
Score = 40.3 bits (90), Expect = 0.043
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 668
V++GTPGR+ + R + ++L VLDEAD++ K H V K++ A
Sbjct: 146 VIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQT--KSLQHTVSKLIEA 195
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 414
+++IAQ+QSGTGKTATF +++L +I T + CQ L +APTRELA QI+ V
Sbjct: 116 QNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +2
Query: 149 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
V TF ++NLKE LL+GI A GF KPS IQ+RA+
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERAL 107
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G+D+I A++G+GKTA F+I ILQ++ + +LILAPTREL+ QI++ +I+LG
Sbjct: 76 LSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSE 135
Query: 436 LNAKCHACIGGTNVREDIRQL 498
+ +GG ++ QL
Sbjct: 136 IGLDVCLILGGLDMVSQALQL 156
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 671
H++VG+PGR+ D + + TIK VLDEAD++LS F D ++ + L D
Sbjct: 161 HIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKIITSLPKD 215
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 445 KCHACIGGTNV 477
K H I G N+
Sbjct: 719 KIHYAIKGGNM 729
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML 662
+V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 741 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMV 792
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 253 FIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVVIAL 426
F+Q +++I + +GTGKTA F I +++ + S Q L++APTRELA+QI+ I
Sbjct: 37 FLQHQNLIVHSPTGTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINF 96
Query: 427 GDHLNAKCHACIGGTNVREDIRQLES 504
H + K + IGG + + ++QLE+
Sbjct: 97 AKHTHLKVVSLIGGIPIWQQLKQLEN 122
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
+VVGT GRV D++ R + ++ ++DE D ML RGFK ++ D+ + Q+
Sbjct: 126 IVVGTMGRVMDLLERGVIKFEHLEHLIIDEVDLMLDRGFKRKLFDLLSRIEKFEQI 181
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ------ALILAPTRELAQQIQKVVIA 423
GRD++ AQ+G+GKT + +++ + + I + ALI+APTRELA Q+Q+ +
Sbjct: 36 GRDLLVSAQTGSGKTLAYGLALAKDLLDGIERFERAGAPLALIVAPTRELALQVQRELAW 95
Query: 424 LGDHLNAKCHACIGGTNVREDIRQLESG 507
L +H + + +C+GG + R + R+L +G
Sbjct: 96 LYEHADGRVVSCVGGMDPRREQRELAAG 123
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 656
H+VVGTPGR+ D + R L + +K VLDEADEML+ GF++ + + +
Sbjct: 125 HIVVGTPGRLCDHLRRGRLDISELKAVVLDEADEMLNLGFREDMEFILE 173
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VVGTPGR+ D + +++L +++K+ VLDEAD ML GF D I DV +D Q +L
Sbjct: 125 HIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLL 183
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A + G DV A+A++G+GKTA F I +L +I S QAL+L PTRELA Q+ K + L
Sbjct: 37 AVLSGADVRAKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLA 96
Query: 430 DHL-NAKCHACIGGTNVREDIRQL 498
N K GG + + + L
Sbjct: 97 RFAQNIKILTLCGGQPMGQQLDSL 120
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A + G+D+IAQA++GTGKTA F + +L ++ Q LIL PTREL +Q+ K + L
Sbjct: 37 AILDGKDLIAQAKTGTGKTAAFGLGVLSKLVLDDYRIQVLILCPTRELCEQVSKAIRDLA 96
Query: 430 DHL-NAKCHACIGGTNVREDIRQLESG 507
+ N K + GG R ++ + G
Sbjct: 97 RMMPNIKLLSLGGGMPFRPQMKSVAHG 123
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VVGTPGR+ + + +L + ++ VLDEAD ML GF+D+I + + Q +L
Sbjct: 125 HIVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEIDAIIDQTNKQRQTLL 183
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----ECQALILAPTRELAQQIQKV 414
A +QG+D++A A++GTGKTA F++ IL+++ + R + + L+L PTRELA Q+ +
Sbjct: 34 AIMQGKDILAGARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPTRELANQVTQN 93
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
+ + L K GG + I+ L+SG+
Sbjct: 94 IKSYAKKLPFKTLPVFGGVSSYPQIQALKSGI 125
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VV TPGR+ D+ + AL I V DEAD M GF I + KML Q +L
Sbjct: 127 IVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEKRQNLL 184
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-N 441
+DV QAQ+GTGKTA F I +L+ ID+ QA+IL PTRELA Q+ + + L +L
Sbjct: 42 KDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPK 101
Query: 442 AKCHACIGGTNVREDIRQLESGV 510
GG + I+ L+ GV
Sbjct: 102 IDVLPVYGGQPIDRQIKALQKGV 124
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++GTPGRV D I R L N IK +LDEADEML GF++ I + + + + Q +L
Sbjct: 126 IIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQFLL 183
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQ----QIDTSI----RECQALILAPTRELAQQIQK 411
+ GRDV+ AQ+GTGKTA+FS+ I+Q Q +TS +ALIL PTRELA Q+
Sbjct: 46 LSGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAA 105
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
V A H + GG ++ + +L GV
Sbjct: 106 NVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGV 138
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++ TPGR+ D + ++ + +++ VLDEAD ML GF + + +L + Q +L
Sbjct: 140 ILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPKERQTLL 197
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 63.3 bits (147), Expect = 5e-09
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPTRELAQQIQKV 414
A I G D++ AQ+GTGKTA FS+ I+ + ID + ++LIL PTRELA QI +
Sbjct: 35 ALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQN 94
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
+ D L K GG + + +E G+
Sbjct: 95 IDDYSDGLGLKTKVVYGGVGRQAQVDSIELGL 126
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ D+I ++ +++FVLDEAD ML GF + + L Q +L
Sbjct: 128 ILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLL 185
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 63.3 bits (147), Expect = 5e-09
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPTRELAQQIQKV 414
A +G DV+A AQ+GTGKTA F++ ILQ+ + +ALIL PTRELA Q+
Sbjct: 34 AIRRGEDVLASAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADN 93
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ A H+N GG + ++L+ G
Sbjct: 94 ISAYSKHMNISVLTIYGGMKMATQAQKLKQG 124
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ + I L + ++ VLDEAD ML GF I + + ++ Q +L
Sbjct: 127 IIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNKKRQNLL 184
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 63.3 bits (147), Expect = 5e-09
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 FIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD 432
F++ +DVIA+A +GTGKT F I +++ ID QAL+LAPTRELA QIQ + L +
Sbjct: 46 FMEWKDVIAKAPTGTGKTFAFGIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCE 105
Query: 433 HLNAKCHACI-GGTNVREDIRQLE 501
C+ GG + + I L+
Sbjct: 106 FKEGVRSVCLYGGAPIEKQITTLK 129
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
+VV TPGR+ D + RR + + ++ VLDEAD ML GF IHDV ++L
Sbjct: 134 IVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLDMGF---IHDVTRIL 180
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G+D+I A +G+GKT F I+Q+I+ +AL+L PTRELA+Q+Q + H
Sbjct: 37 LEGKDIIGGAATGSGKTLAFGCGIIQKIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRH 95
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
+ GG + IRQLE
Sbjct: 96 KQLRVAPIYGGVAINPQIRQLE 117
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
E VVV TPGR+ D I R + +++ VLDEAD ML GF D + ++ +D Q
Sbjct: 117 ERADVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSDRQT 176
Query: 681 IL 686
++
Sbjct: 177 MM 178
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKV 414
++G+D I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+APTREL QI K
Sbjct: 44 LRGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKD 103
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLES 504
AL + +GG + + ++QLE+
Sbjct: 104 AAALTKYTGLNVMTFVGGMDFDKQLKQLEA 133
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +3
Query: 504 WCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 656
+C ++V TPGR+ D R +H + +++ VLDEAD ML GF Q+ + +
Sbjct: 135 FCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIR 185
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 62.9 bits (146), Expect = 7e-09
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC-----QALILAPTRELAQQIQKV 414
A ++GRDV+ AQ+GTGKTA ++ IL Q+ + R+ AL+LAPTRELA QI
Sbjct: 35 AALEGRDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDS 94
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESG 507
A G HL + GG ++ L+ G
Sbjct: 95 FDAYGRHLKLRSVLIYGGVGQGNQVKALKRG 125
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
H++V TPGR+ D++ + + N +++FVLDEAD ML GF + + L Q
Sbjct: 127 HILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQRQ 182
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 62.9 bits (146), Expect = 7e-09
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I G DVI QA+SG GKTA F +S LQQI+ S + AL+L TRELA QI + +
Sbjct: 81 ILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTY 140
Query: 436 L-NAKCHACIGGTNVR 480
L + K GG N++
Sbjct: 141 LPDTKVSVFYGGVNIK 156
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVIL 686
H+VVGTPGRV + + L ++ F+LDE D+ML S + + ++FKM D QV++
Sbjct: 168 HIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 227
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HV+VGTPGRV D + R L + +K VLDEADEML GF + + +V + L A QV L
Sbjct: 136 HVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVAL 194
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A + GRDV+ QAQ+GTGKTA F++ +L + + + Q L+LAPTRELA Q+ +
Sbjct: 48 ALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVAEAFQRYA 107
Query: 430 DHLNA-KCHACIGGTNVREDIRQLESGV 510
++ + GG + + + L+ GV
Sbjct: 108 ASISGFRVLPVYGGQSYGQQLAALKRGV 135
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 62.5 bits (145), Expect = 9e-09
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A + G D+IA AQ+G+GKT F++S+L + E + LIL P+RE+AQQI KV + L
Sbjct: 66 ASLDGSDIIAIAQTGSGKTLAFALSLLTTLQKK-PEARGLILVPSREMAQQIYKVFLELC 124
Query: 430 DHLNAKCHACIGGTNVREDIRQLE 501
+ IGGT + QL+
Sbjct: 125 AEMPVSVCLAIGGTTGSKQANQLK 148
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++ TPGR+ D ++ L +++ VLDEAD ML GF Q+ + L Q ++
Sbjct: 153 LIIATPGRMNDHLSGNKLLLQNVEVIVLDEADRMLDMGFAPQLRTIQSTLRGPRQTMM 210
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 62.5 bits (145), Expect = 9e-09
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNA 444
D++A AQ+GTGKTA F ++Q+ID + R QALIL+PTREL QI + +
Sbjct: 42 DLVALAQTGTGKTAAFGFPVIQKIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGI 101
Query: 445 KCHACIGGTNVREDIRQLESG 507
A GG ++ E R ++ G
Sbjct: 102 NVVAVYGGASITEQARDIKRG 122
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
++V TPGR+ DMI RR + + I +LDEADEML+ GF + I ++
Sbjct: 125 IIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYEDIVNI 170
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
F+ + L E LLR I GFE P+ +Q++AI
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAI 33
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 62.5 bits (145), Expect = 9e-09
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI-QKVVIALGD 432
+QG+DVI QAQ+G+GKT F I L++I+ + QA++L PTRELA+Q+ Q+ A D
Sbjct: 39 LQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKD 98
Query: 433 HLNAKCHACIGGTNVREDIRQLE 501
N K GG + I+ L+
Sbjct: 99 IGNIKVTTLCGGQPMGPQIQSLK 121
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H++VGTPGRV D + +R + +KL VLDEAD ML GF+D + +F VQ +L
Sbjct: 125 HIIVGTPGRVMDHVEKRRIDLRNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQTLL 183
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 62.5 bits (145), Expect = 9e-09
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQKVVI 420
+ GRDV+ AQ+GTGKTA F + +L + + R C+ LILAPTREL QI + +
Sbjct: 106 LNGRDVLGIAQTGTGKTAAFGLPLLDALMKAGTKPAPRTCRGLILAPTRELVSQICESLR 165
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESG 507
A + + K +GG + I++ E G
Sbjct: 166 AFTEGSHLKLQVIVGGVAIGPQIKRAERG 194
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ D++ R+AL + + VLDEAD+ML GF + + +L A+ Q +L
Sbjct: 197 LIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAERQTML 254
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 62.5 bits (145), Expect = 9e-09
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIAL 426
++G+D++A AQ+GTGKTA+F++ +L+Q+ + +AL++ PTRELA Q+ +
Sbjct: 57 LEGKDIMACAQTGTGKTASFALPVLEQLSKQPNDKPLLRALVMTPTRELAIQVCANIQKY 116
Query: 427 GDHLNAKCHACIGGTNVREDIRQLESGV 510
L K A GG N+ + +E GV
Sbjct: 117 SQFLPLKTLAVYGGANMNPQRKGVEQGV 144
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR++D+I + L +++ V+DEAD ML GF I V ++++ + Q +L
Sbjct: 146 ILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIATEHQTML 203
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQI--------DTSIRECQALILAPTRELAQQIQKVVI 420
RD+IA A++GTGKT + I ++Q + +TS AL+LAPTRELA QIQK +
Sbjct: 214 RDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETL 273
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESG 507
L + CIGG ++ I +L +G
Sbjct: 274 KLATPFGLRVCCCIGGEPMQPQIEELSNG 302
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
+VV PGR+ D++ + L VLDEAD+M+ G Q+ +F L
Sbjct: 305 IVVAAPGRLKDLLNQSYLVLGQCYFVVLDEADKMIDLGLDVQVRYIFSEL 354
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQALILAPTRELAQQIQKVVI 420
+ GRDV+ AQ+GTGKTA+F++ IL +I + + L+L+PTREL+ QI
Sbjct: 51 LTGRDVVGIAQTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFN 110
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
A G H+ IGG + +R L GV
Sbjct: 111 AYGRHIRLSSTLAIGGVPMGRQVRSLMQGV 140
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
V+V TPGR+ D++ L +++ VLDEAD ML GF + I + L Q +
Sbjct: 142 VLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPIKRQTL 198
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/82 (32%), Positives = 51/82 (62%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G+DVIA++ +GTGKT + + +L +I+ +++ Q ++LAPTREL QI + V
Sbjct: 33 LEGQDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTRELVMQIHEEVQKFTAG 92
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
+ IGG +++ + +L+
Sbjct: 93 TEISGASLIGGADIKRQVEKLK 114
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
V+VG+PGR+ ++I + L + +K V DE D+++ + + DV K D Q++
Sbjct: 119 VIVGSPGRILELIRMKKLKMHEVKTIVFDEFDQIVKQKMMGAVQDVIKSTMRDRQLV 175
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 444
+D+IA +Q+G+GKTAT +I I +++T + + QALI+ PTRELA Q +G +
Sbjct: 53 QDLIALSQTGSGKTATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGV 112
Query: 445 KCHACIGGTNVREDIRQLESGV 510
K A GG + +L+ GV
Sbjct: 113 KAFAIFGGEDSALQQSKLKHGV 134
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V+V TPGR+ D I R + + ++ +LDEADEMLS GF D + + + L+ Q +L
Sbjct: 136 VLVATPGRLIDFIYSRQIDLSHVETLILDEADEMLSMGFYDDLVFIIQCLNHSHQTLL 193
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G D++ +AQ+GTGKTA F++ +L ++D +++ Q L+LAPTRELA Q+ + +
Sbjct: 79 LAGHDLLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKN 138
Query: 436 L-NAKCHACIGGTNVREDIRQLESG 507
L GG ++ +RQL G
Sbjct: 139 LPGFHVLPVYGGQSMVVQLRQLARG 163
Score = 59.7 bits (138), Expect = 7e-08
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HV+VGTPGRV D I R++L+ +++ VLDEADEML GF D + + + A+ Q L
Sbjct: 165 HVIVGTPGRVMDHIERKSLNLDSLTTLVLDEADEMLRMGFIDDVEWILQHTPAERQTAL 223
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTS--IRECQALILAPTRELAQQIQKVVIALG 429
++G+DV+ +Q+G+GKTA F + +LQ++ + +ALIL PTRELA Q V LG
Sbjct: 55 LEGKDVLVGSQTGSGKTAAFVLPMLQKLTEAGPAPGPRALILEPTRELAAQTAAVCRQLG 114
Query: 430 DHLNAKCHACIGGTNVREDIRQLESGV 510
L+ K GGT+ + ++ + GV
Sbjct: 115 RRLSLKTRVICGGTSREQQVQSVSDGV 141
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQALILAPTRELAQQIQKVVI 420
+ GRD++ AQ+GTGKTA F++ +L + T + R +ALIL+PTRELA QI + +
Sbjct: 39 LAGRDMLGIAQTGTGKTAAFALPLLHHLMTVGGKPTTRTTKALILSPTRELAVQIAESIA 98
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
L + GG +VR I+ L GV
Sbjct: 99 DLSEGTPISHCVVFGGVSVRPQIQALARGV 128
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
++V TPGR+ D++ +RA+ + +LDEAD ML GF + DV K++
Sbjct: 130 ILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGF---VRDVMKIV 176
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQA---LILAPTRELAQQIQKV 414
++GRD++ A++G+GKT F ++I ++ DT + LI+APTRELA Q+ +
Sbjct: 35 LEGRDLLVSARTGSGKTVAFGLAIANELLGGEDTFLIRAATPLGLIIAPTRELALQVARE 94
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ L + NA+ C+GG ++R++ R LE G
Sbjct: 95 LRWLYANTNAEIATCVGGMDMRDERRALERG 125
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 641
H+VVGTPGR+ D I R + + I+ VLDEADEML GF++++
Sbjct: 127 HIVVGTPGRLVDHINRGSFDTSAIRAVVLDEADEMLDLGFREEL 170
>UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3;
Rhodospirillales|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 731
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
CH+VVGTPGR+ D + R L+ + ++ VLDEADEML GF+D++ ++ A+ + +L
Sbjct: 168 CHIVVGTPGRLCDHLGRGRLNLSRLRAVVLDEADEMLDLGFRDELEEILDATPAERRTLL 227
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQI---DTSIRECQA---LILAPTRELAQQIQKVVIAL 426
RD++ AQ+G+GKT + +++ + D + + A LI+APTRELA Q+Q+ ++ L
Sbjct: 81 RDLLVSAQTGSGKTVAYGLALADTLLGADERLGQAGAPLALIVAPTRELAMQVQQELLWL 140
Query: 427 GDHLNAKCHACIGGTNVREDIRQLESG 507
A+ +CIGG + R + + LE G
Sbjct: 141 YGPAGARVVSCIGGMDARREAQALERG 167
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIAL 426
++G+D++ A +GTGKTA FS+ +LQ+I AL+L PTRELA Q+ + +
Sbjct: 71 LEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAEAIHRY 130
Query: 427 GDHLNAKCHACIGGTNVREDIRQLESGV 510
G L GG + + +R L+ GV
Sbjct: 131 GQKLGISVVPLYGGQVISQQLRVLKRGV 158
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
VVV TPGR D + R+ L +++ VLDEADEML GF + + +
Sbjct: 160 VVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAEDLEAI 205
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G + A +GTGKT F + +L +IDT+++ Q LILAP++ELA Q +V G+ +
Sbjct: 30 GDSIFGLAPTGTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVAREWGNAVG 89
Query: 442 AKCHACIGGTNVREDIRQLE 501
A + IGG N R +++
Sbjct: 90 ASVASLIGGANGRRQADKIK 109
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
H+VVGT GRV M+ L + I + DEAD ML+ D +H++ L + +Q+
Sbjct: 114 HIVVGTLGRVLTMVDGGVLKLDHIATVIFDEADAMLTEERHDSLHELADKLPSHIQL 170
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/87 (35%), Positives = 46/87 (52%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A + GRDV AQ+GTGKTA F++ IL ++ R + L+L PTRELA Q+++
Sbjct: 166 AVLAGRDVTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYS 225
Query: 430 DHLNAKCHACIGGTNVREDIRQLESGV 510
+ + GG + L+ GV
Sbjct: 226 KYTDLTATVVYGGVGYGKQREDLQRGV 252
Score = 37.9 bits (84), Expect = 0.23
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGF 629
VV TPGR+ D I + + +++ VLDE D ML GF
Sbjct: 254 VVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLDMGF 292
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VV TPGR+ DM+T++ ++ + VLDEAD ML GF+D+I +F A Q +L
Sbjct: 324 HIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLL 382
Score = 46.4 bits (105), Expect = 7e-04
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQIQK 411
+ GRD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI
Sbjct: 225 LSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFD 284
Query: 412 VVIALGDHL------NAKCHACIGGTNVREDIRQLESGV 510
++I + D L + CIGG + E + + G+
Sbjct: 285 LIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI 323
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-- 438
RDV+A+A++GTGKT +F I ILQ ++ + QAL+L TRELA Q KV L ++
Sbjct: 59 RDVVARAKNGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPD 118
Query: 439 -NAKCHACIGGTNVRED 486
+ IGG ++ ED
Sbjct: 119 VTGRIMCAIGGVSIAED 135
Score = 37.1 bits (82), Expect = 0.40
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGF 629
VV+ TPGR+ +I L+ + VLDEAD +LS+ F
Sbjct: 145 VVLATPGRLQQLIDEEILNFRDCSIVVLDEADMLLSQNF 183
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
IQG+ + AQ+G+GKTA F IS+L ++ CQA+I++PT+EL+ Q +V+ LG
Sbjct: 38 IQGQSISVNAQTGSGKTAAFGISLLSLVNPQKSICQAVIISPTKELSNQTLEVINTLGTR 97
Query: 436 LNAKCHACIGGTNVREDIRQLESG 507
+ G +E ++ G
Sbjct: 98 SGIRGVCLTSGVMAKEQFEKITKG 121
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/84 (41%), Positives = 49/84 (58%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ GRDV+ QA +GTGKT +SIS+LQ+I Q LI+APTRELA QI + V +
Sbjct: 37 LTGRDVVGQAHTGTGKTGAYSISMLQEIKEG-GGIQGLIVAPTRELAVQITEEVKKFAKY 95
Query: 436 LNAKCHACIGGTNVREDIRQLESG 507
+ A GG ++ + L+ G
Sbjct: 96 TKVRPVAIYGGQSMGVQLDALKRG 119
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
++V TPGR+ D I R ++ + + VLDEAD ML GF D I + L+ D +V+ L
Sbjct: 122 ILVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFIDDIQFILD-LTPDEKVMSL 179
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 62.1 bits (144), Expect = 1e-08
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTS-------IRECQALILAPTRELAQQIQKV 414
++G+D I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+APTREL QI K
Sbjct: 44 LRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKD 103
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLES 504
AL + + +GG + + ++ LE+
Sbjct: 104 AAALTKYTGLNVMSFVGGMDFDKQLKALEA 133
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 656
C ++V TPGR+ D R +H + +++ VLDEAD ML GF Q+ + +
Sbjct: 136 CDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIR 185
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSI-----RECQALILAPTRELAQQIQKVVI 420
++G+D+ AQ+GTGKTA F++ + + T+ R C+ LIL+PTRELA QI +
Sbjct: 41 LEGKDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACN 100
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESG 507
HL +A GG + +R L+ G
Sbjct: 101 DYTRHLRMSVNAVFGGVPIGRQMRMLDRG 129
Score = 52.8 bits (121), Expect = 8e-06
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
++V TPGR+ D+I +RAL +++FVLDEAD+ML GF + + K+L + Q +
Sbjct: 132 ILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLLPKNRQTL 188
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G++VI +A++GTGKT + + I+++ID S E QA+IL+PT EL QI V+ L
Sbjct: 37 LKGKNVIGKAETGTGKTLAYLLPIIEKIDDSKNEMQAIILSPTHELGVQINNVLNDLKRG 96
Query: 436 LNAKCHA--CIGGTNVREDIRQLES 504
L K + +G N++ + +L++
Sbjct: 97 LGKKITSTTLVGSGNIKRQMEKLKN 121
Score = 46.0 bits (104), Expect = 9e-04
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H++VGT GR+ ++I ++ + NTIK V+DE D++L + V K D Q ++
Sbjct: 124 HILVGTTGRILELINKKKITTNTIKTIVIDEGDKLLDFINIKDVKSVVKSCPRDTQKLI 182
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G D++ QAQ+GTGKTA+F I IL ++ QAL+L PTRELA Q+ + + +L +
Sbjct: 41 GLDLMGQAQTGTGKTASFGIPILNRVIKG-EGLQALVLCPTRELAVQVTEEISSLSRRMR 99
Query: 442 AKCHACIGGTNVREDIRQL 498
+ A GG ++ +R L
Sbjct: 100 IQVLAIYGGQSIELQLRSL 118
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++VGTPGR+ D + R + + +K VLDEADEML GF I + + Q L
Sbjct: 124 IIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRERQTFL 181
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGD-HLNA 444
++I Q+Q+GTGK+ F + ++Q ID+ I+E QA+++APTRELAQQ+ L
Sbjct: 43 NLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGV 102
Query: 445 KCHACIGGTNVRED 486
IGGT++ +D
Sbjct: 103 SVKVFIGGTDIEKD 116
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
+++GTP R+ D+ LH + V+DEAD M+ G + + + L + +
Sbjct: 126 LIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMIDLGLIEDVDYIAARLEDNANI 181
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID---TSIREC--QALILAPTRELAQQIQKVVI 420
++G D+I AQ+GTGKTA F++ IL Q+D + C Q L+L+PTRELA QI +
Sbjct: 31 LEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFN 90
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
G ++ + GG +R L+ GV
Sbjct: 91 VYGRNVKFRLTTIFGGVGQNPQVRALKRGV 120
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
HV + TPGR+ D++ + + + K FVLDEAD ML GF + + L Q I
Sbjct: 121 HVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDMGFMPALKTIVSKLPKQRQTI 178
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A + G ++ AQ+GTGKTA F++ +L +ID ++ E Q L+LAPTRELA Q+ +
Sbjct: 57 ALLAGNHLLGVAQTGTGKTAAFALPLLSRIDANVAEPQILVLAPTRELAIQVAEAFTTYA 116
Query: 430 DHL-NAKCHACIGGTNVREDIRQLESG 507
N GG + IR L+ G
Sbjct: 117 SKFRNFHVLPIYGGQDFSPQIRGLKRG 143
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
V+VGTPGR+ D + + L + +K VLDEADEML GF D + +
Sbjct: 146 VIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFIDDVEAI 191
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
C VV+GTPGR+ D + R+ L + +K VLDEADEML+ GF D + + K S DVQ +L
Sbjct: 213 CDVVIGTPGRMKDHLERKTLMMDKLKFRVLDEADEMLNMGFVDDVELILKS-SGDVQTLL 271
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID-----------TSIRECQALILAPTRELAQQ 402
+ G+DV+ +A++G GKT F + I++++ R ++LAPTRELA+Q
Sbjct: 118 LSGKDVVGRARTGCGKTLAFVLPIVEEMAKISPMPANGRRVQGRRPMCVVLAPTRELAKQ 177
Query: 403 IQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ +G+ K GGT RE L G
Sbjct: 178 VFADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGG 212
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRELAQQIQKVVI 420
+ GRD++ AQ+G+GKT + + + I+ R + AL+LAPTRELAQQIQ+V I
Sbjct: 192 MSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAI 251
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
G + + + GG + R LE GV
Sbjct: 252 EFGSNTHVRNTCIFGGAPKGQQARDLERGV 281
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+V+ TPGR+ D + R VLDEAD ML GF+ QI + + + D QV++
Sbjct: 283 IVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLM 340
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGD 432
+ G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 59 MDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGR 118
Query: 433 HLNAKCHACIGGTNVRE 483
+C +GG + E
Sbjct: 119 FTGLRCACLVGGDQIEE 135
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 453 CLHWWHQCP*RYSPTGEWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 632
CL Q ++S E +++ TPGR+ +I L + ++ V DEAD + GF+
Sbjct: 126 CLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQ 185
Query: 633 DQIHDVFKMLSADVQVIL 686
DQ+ + K + Q +L
Sbjct: 186 DQLTETLKRIPESRQTLL 203
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G D++ Q++SGTGKT + ++ LQ S + + L++ PTRELA Q+ + LG+
Sbjct: 60 LTGMDLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEK 119
Query: 436 LNA-KCHACIGGTNVREDIRQLES 504
L + K + +GGT+V D +L +
Sbjct: 120 LRSFKVSSFMGGTDVTRDREKLRN 143
Score = 46.0 bits (104), Expect = 9e-04
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEM-LSRGFKDQIHDVFKMLSADVQVI 683
CHV +GTPGR+ + + L+ + +KL VLDEAD++ ++ + ++ + +L QVI
Sbjct: 144 CHVAIGTPGRLLQLHEKGVLNMSMVKLLVLDEADQLYVTASLQKTVNALIAVLPLQRQVI 203
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/83 (33%), Positives = 54/83 (65%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G++++ ++++GTGKTA++ + +L I++S Q +IL P RELA QI + V + +
Sbjct: 145 GKNLLVRSKNGTGKTASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRMSEGTG 204
Query: 442 AKCHACIGGTNVREDIRQLESGV 510
+GGT++++DI ++ +GV
Sbjct: 205 VISAPVVGGTSMQDDIIRVSNGV 227
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HV+VGTPGR+ D++ +R + + V DEAD++L F + + + +L + Q++L
Sbjct: 228 HVMVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETVTKLLDLLPREKQMLL 286
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID----TSIRECQALILAPTRELAQQIQKVVIA 423
+QG DV+A A++G+GKT F + +++++ T ALI++PTRELA QI +V+
Sbjct: 76 LQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTK 135
Query: 424 LGDHLNAKCHACIGGTNVREDIRQL 498
+G H + IGG +V+ ++ ++
Sbjct: 136 IGSHTSFSAGLVIGGKDVKFELERI 160
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++++GTPGR+ + + L+ + +++ VLDEAD L GFK + + LS Q +L
Sbjct: 164 NILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQTLL 223
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/50 (58%), Positives = 38/50 (76%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 405
+ RDV+ QAQ+GTGKTA+F++ IL +ID QAL+LAPTRELA Q+
Sbjct: 42 LNNRDVLGQAQTGTGKTASFALPILARIDIKQTTPQALVLAPTRELAIQV 91
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HVVVGTPGRV D + + +L + IK VLDEADEML GF D + + + Q L
Sbjct: 128 HVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPESRQTAL 186
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
D I AQ+GTGKTA F + +L ID + QALIL+PTREL QQI+K + +++ +
Sbjct: 42 DFIGLAQTGTGKTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDR 101
Query: 448 --CHACIGGTNVREDIRQLE 501
A GG + + L+
Sbjct: 102 IFLEAVFGGEKIDRQMNNLK 121
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 656
H+V+ TPGR+ D+I R A+ + +K +LDEADEMLS GFK ++ + K
Sbjct: 125 HIVIATPGRLIDLIERGAVDISHVKTVILDEADEMLSMGFKQDLNRILK 173
>UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;
n=6; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 41 - Arabidopsis thaliana (Mouse-ear cress)
Length = 505
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++GTPGRV D++++ + + I FVLDE D ML RGF+DQ+ +F+ LS QV+L
Sbjct: 239 LIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALS-QPQVLL 295
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDT--------SIRECQALILAPTRELAQQI 405
A + G+ ++A A +G+GKTA+F + I+ + T R A++LAPTREL Q+
Sbjct: 143 AALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQV 202
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
+ LG L K +GG + + +++ GV
Sbjct: 203 EDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGV 237
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 420
+ GRD+I A++G+GKT ++ + +++ I + L+L+PTRELA QI+K ++
Sbjct: 423 LSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEIL 482
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
++ K C GG+N+ I +L+ GV
Sbjct: 483 KFSSTMDLKVCCCYGGSNIENQISELKRGV 512
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIK---LFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
+V+V TPGR+ D++ T++ VLDEAD M GF+ QI +F + D Q
Sbjct: 513 NVIVATPGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQT 572
Query: 681 IL 686
+L
Sbjct: 573 VL 574
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A + G DV+ AQ+GTGKTA F+I +L +ID + + QAL+L PTRELA Q+ + G
Sbjct: 46 ALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYG 105
Query: 430 DHLN 441
+L+
Sbjct: 106 AYLS 109
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVVGTPGR+ D + R L + + VLDEADEML+ GF D + + QV L
Sbjct: 135 VVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVAL 192
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKVVIALG 429
R++IAQ+QSGTGKT F ++IL ++D + QAL LAP+RELA+QIQ V+ ++G
Sbjct: 136 RNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIG 191
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +3
Query: 495 TGEWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSAD 671
TG +VVVGTPG V D+I RR + +KL V+DEAD ML +G +Q V ML
Sbjct: 211 TGVKANVVVGTPGTVMDLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNMLPKT 270
Query: 672 VQVIL 686
+Q +L
Sbjct: 271 IQTLL 275
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A + G+DV A A +G+GKT + + +L+++ TS E QAL+L PTRELA Q+ +V+ +G
Sbjct: 55 AMLTGKDVFALANTGSGKTLAYGLPLLERLKTS-PEQQALVLVPTRELAMQVSEVLTHVG 113
Query: 430 DHLNAKCHACIGGTNVRE 483
L GG + E
Sbjct: 114 TALGLNTLCLCGGVDKTE 131
Score = 40.3 bits (90), Expect = 0.043
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++V T GR++D+ T+ L N + VLDEAD +L GF Q+ + + Q ++
Sbjct: 141 NILVATTGRLFDL-TQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTVM 198
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPTRELAQQIQKVV 417
A + GRDV+ AQ+G+GKTA F++ +LQQ+ + R + LIL PTRELA Q+ + +
Sbjct: 38 AILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPRPTRGLILVPTRELAAQVGEAI 97
Query: 418 IALGDHL--NAKCHACIGGTNVREDIRQLESG 507
+L K GG ++ + L G
Sbjct: 98 AGFAKYLPQRVKVAVVFGGVSINPQMMNLRGG 129
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
+VV TPGR+ D++ AL + + VLDEAD +L GF +++ + ++L
Sbjct: 132 IVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRILELL 181
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ +D+I QAQ+GTGKTA F + +L +I+ +I Q LILAPTRELA Q+ + V
Sbjct: 47 LNNKDIIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLILAPTRELAIQVSEAVQTYARG 106
Query: 436 LNA-KCHACIGGTNVREDIRQLESGV 510
+ GG + +R L+ GV
Sbjct: 107 MKGFHVLPIYGGQSYDIQLRPLKRGV 132
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +3
Query: 492 PTGEWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSAD 671
P H +VGTPGRV D I ++ L + +K FVLDEADEML GF D I + + +
Sbjct: 127 PLKRGVHAIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQRIPEQ 186
Query: 672 VQVIL 686
Q+ L
Sbjct: 187 RQIAL 191
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QGRD A++G+GKT F++ ILQ++ AL+L PTRELA QI++ + A G+
Sbjct: 96 MQGRDFCGIARTGSGKTLCFALPILQELSQDPYGIFALVLTPTRELALQIEQQMNAYGNP 155
Query: 436 LNAKCHACIGGTNVREDIRQLES 504
L + + IGG + E L+S
Sbjct: 156 LGIQAQSLIGGKDSVEQSAILDS 178
Score = 33.1 bits (72), Expect = 6.6
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHAN--TIKLFVLDEADEML 617
H+++ TPGR+ M+ A N +K VLDEAD +L
Sbjct: 181 HILIATPGRLAYMLESAAAQRNFRRMKYLVLDEADRLL 218
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
++IAQA++G+GKTATF++++L +++ ++ QAL + PTRELA Q +V+ LG K
Sbjct: 139 NIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIK 198
Query: 448 C 450
C
Sbjct: 199 C 199
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 471 QCP*RYSPTGEWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSR--GFKDQIH 644
QCP RY ++ H+ VGTPG+ D + +R ++ + + VLDEADE++++ Q+
Sbjct: 205 QCP-RYEDNDQY-HLYVGTPGKTMDFLKKRIMNVTNVVMLVLDEADELINQQNNMGPQVL 262
Query: 645 DVFKMLSADVQVIL 686
+ VQ++L
Sbjct: 263 QIRNFFRGPVQIVL 276
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 60.9 bits (141), Expect = 3e-08
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKVVI 420
+ GRD++ AQ+G+GKT + L I +R AL+LAPTRELAQQIQ+V
Sbjct: 157 LSGRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQQVAT 216
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESG 507
G +NA GG IR LE G
Sbjct: 217 DFGQRINANNTCVFGGAPKGPQIRDLERG 245
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+V+ TPGR+ D + R + VLDEAD ML GF+ QI + + D QV++
Sbjct: 248 IVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQVLM 305
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIALG 429
+ G DV+A A++G+GKTA F I +L+++ + + +ALIL+PTR+LA+Q K LG
Sbjct: 63 LSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELG 122
Query: 430 DHLNAKCHACIGGTNVREDIRQLESG 507
+ + +GG ++ + +L G
Sbjct: 123 KFTDLRVSLLVGGDSMEDQFEELTKG 148
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V++ TPGR+ +++ + T++ V DEAD + GF +Q+H + LS + Q +L
Sbjct: 151 VIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLL 209
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQKVVI 420
++G+D++ AQ+G+GKTA FS+ ILQ+I + +ALILAPTRELA QI++ +
Sbjct: 122 LEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIR 181
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
+ + +GG + I+++ G+
Sbjct: 182 NVSKSAHISTALVLGGVSKLSQIKRIAPGI 211
Score = 41.1 bits (92), Expect = 0.025
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V++ TPGR+ D++ + + + VLDEAD ML GF + + + K A+ Q L
Sbjct: 213 VLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKATHAERQTAL 270
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQ-IDTSIRECQALILAPTRELAQQIQKVVIALGD 432
+ GRDV+A A +G+GKTA F + IL Q ID +AL++ PTRELA QI + + L
Sbjct: 36 MSGRDVMASAVTGSGKTAAFLLPILHQLIDRPRGTTRALVITPTRELAAQILEDLNDLAV 95
Query: 433 HLNAKCHACIGGTNVREDIRQLESGV 510
H A GG ++R GV
Sbjct: 96 HTPISAAAVFGGVSIRPQEHAFRRGV 121
Score = 39.9 bits (89), Expect = 0.057
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
V++GTPGR+ D ++ VLDEAD ML GF I + K + A Q +
Sbjct: 123 VLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARRQTL 179
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
C +VV TPGR+ D++ + AL +K VLDEAD ML GF D++ D+ +VQ +L
Sbjct: 126 CDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQTPGNVQTLL 185
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPTRELAQQIQKVV 417
A ++G D+IA A++G+GKTA F + +L+++ + AL+L PTRELA Q+ + V
Sbjct: 34 AVLKGHDLIAAAETGSGKTAGFVLPLLEKLHSIPAPGNNLTHALVLVPTRELAVQVSQSV 93
Query: 418 IALGDHLNAKCH--ACIGGTNVREDIRQLESG 507
++ K A GG + ++ L G
Sbjct: 94 DRYSENCPRKIRSVAIYGGAAINPQMQSLSKG 125
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPTRELAQQIQKVV 417
A ++G+D++ AQ+G+GKTA+F + ILQ + T R AL+L PTRELA Q+ +V
Sbjct: 42 AILKGKDILGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVF 101
Query: 418 IALGDHL--NAKCHACIGGTNVREDIRQLE 501
A + L K A GG ++ + QL+
Sbjct: 102 QAFSNALPNKIKSLAVYGGVSINPQMIQLQ 131
Score = 57.6 bits (133), Expect = 3e-07
Identities = 22/58 (37%), Positives = 44/58 (75%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++ TPGR+ D++ +A++ + +++ VLDEAD+ML+ GFK+++ ++FK+L Q +L
Sbjct: 135 ILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKLLPQKRQNLL 192
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HV+V TPGR+ ++I ++ N I + +LDEAD ML GF+ Q+ D+ + D Q ILL
Sbjct: 201 HVIVATPGRLIELIDEGMVNLNKITMLILDEADRMLDMGFEPQVRDIVSTIREDRQTILL 260
Score = 36.7 bits (81), Expect = 0.53
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID--TSIREC---QALILAPTRELAQQIQKVVI 420
+ GR+ +A AQ+G+GKT + + L ++ I E + LIL PTREL QI ++
Sbjct: 94 LSGRNALAIAQTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQIYDQLL 153
Query: 421 AL 426
L
Sbjct: 154 QL 155
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 60.5 bits (140), Expect = 4e-08
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQ-ALILAPTRELAQQIQKV 414
A + GRDVI A++G+GKT F + +L+ + S E A++++PTRELA QI K
Sbjct: 436 AIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKE 495
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESG 507
LN + C+GG+++ EDI ++ G
Sbjct: 496 CQPFLKVLNIRASCCVGGSSISEDIAAMKKG 526
Score = 39.9 bits (89), Expect = 0.057
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
VV+ TPGR+ D++T R + V+DEAD M GF+ Q+ + + Q +
Sbjct: 529 VVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNVRPSAQKV 588
Query: 684 L 686
L
Sbjct: 589 L 589
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +1
Query: 274 IAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 414
I+ + SGTG TATF+ISILQQID ++ +A LAPTR LAQQIQKV
Sbjct: 182 ISCSPSGTGNTATFAISILQQIDLDLKATKASGLAPTRVLAQQIQKV 228
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 60.1 bits (139), Expect = 5e-08
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVVIAL-GDH 435
GRD++ QAQ+GTGKTA F++ +++++ D + L++ PTRELA Q+ + + +
Sbjct: 88 GRDLLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPTRELATQVAESFKSYSSES 147
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
N K A GGT+ R I L+ V
Sbjct: 148 TNFKTIAIYGGTDYRNQIYALKRKV 172
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVVGTPGR+ D I + N+I VLDEADEML+ GF + I + L + Q++L
Sbjct: 174 VVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNKQMVL 231
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
D++ AQ+GTGKTA F I ++Q DT ++ QAL+L PTREL Q+ + +G ++
Sbjct: 42 DLVGLAQTGTGKTAAFGIPLIQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKL 101
Query: 445 KCHACIGGTNVREDIRQLESG 507
K GG ++ +L G
Sbjct: 102 KIVPVYGGASIVSQTEELRKG 122
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
VVV TPGR++D+I R A+ + + VLDEADEML GF+D+++ +
Sbjct: 125 VVVATPGRLHDLIRRGAVDLSGVSWVVLDEADEMLQMGFQDELNAI 170
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++VGTPGR+ D I R+ L + IK VLDEADEML GFK + VF+ Q +L
Sbjct: 121 NIIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNKYQTLL 179
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ +D+I ++ +GTGKT F + ILQ ++T +++ QA+IL PT ELA QI + V +
Sbjct: 36 LNSQDIIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIILCPTHELASQIIEQVRKFATY 95
Query: 436 LNAKCHACI-GGTNVREDIRQL 498
L I GG++++ I L
Sbjct: 96 LEGVNATLICGGSHIQRQIYAL 117
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/60 (46%), Positives = 38/60 (63%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
CH+VVGTPGR+ D I R AL + +K VLDEADEML GF++ + + A + +L
Sbjct: 125 CHIVVGTPGRLRDHIERGALDMSQLKAVVLDEADEMLDFGFREDLEYILDAAPASRRTLL 184
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQ---ALILAPTRELAQQIQKVVI 420
+GRD++ AQ+G+GKTA F +++ + + D ALI+APTRELA Q+Q+ +
Sbjct: 36 EGRDLLVSAQTGSGKTAAFGMAMAKTLLGDDDQFNRPDLPMALIVAPTRELALQVQRELA 95
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESG 507
L + +C+GG + R + + LE G
Sbjct: 96 WLYGEARGQIASCVGGMDPRAERKALERG 124
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H++V TPGR+ D++ +RAL + + V DEAD ML GFKD+I +V K L + Q +L
Sbjct: 135 HILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVEVLKRLPSTRQTLL 193
Score = 55.6 bits (128), Expect = 1e-06
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-----------DT---SIRECQALILAPTREL 393
+ G+DV+A AQ+GTGKTA F++ +L Q+ DT + AL+L PTREL
Sbjct: 36 LSGKDVMAGAQTGTGKTAAFALPLLHQLLTHQDNLAAQPDTQHINSTPITALVLVPTREL 95
Query: 394 AQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
AQQ+ + + GG ++ E IRQL +G
Sbjct: 96 AQQVHSSIEQYAYGSSVTSVMVYGGVSIGEQIRQLANG 133
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A ++ +D+I ++Q+G+GKTA F+I I Q +D + QAL+L PTRELA Q+++ + +G
Sbjct: 37 AILEHKDIIVKSQTGSGKTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKEDMFNIG 96
Query: 430 DHLNAKCHACIG 465
K A G
Sbjct: 97 RFKRLKVAAVYG 108
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/60 (48%), Positives = 37/60 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HVVVGTPGR+ D + + + IK V+DEADEM + GF DQI + K LS +LL
Sbjct: 124 HVVVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMFNMGFVDQIETIIKDLSKKRVTMLL 183
>UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=2; Proteobacteria|Rep: ATP-dependent
RNA helicase, DEAD box family protein - Alteromonas
macleodii 'Deep ecotype'
Length = 441
Score = 60.1 bits (139), Expect = 5e-08
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSIS----ILQQIDTSIRECQALILAPTRELAQQIQKVVIA 423
IQG+D+IA +++G+GKT F + ++ Q S ++ +ALILAPTRELA+Q+ +
Sbjct: 36 IQGKDIIASSKTGSGKTFAFLVPAINRLMAQKALSRQDPRALILAPTRELAKQVFIEAKS 95
Query: 424 LGDHLNAKCHACIGGTNVREDIRQL 498
+ LN C +GG N + ++ L
Sbjct: 96 MCTGLNLTCSLIVGGENYNDQVKAL 120
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 641
H++VGT GRV D + ++++ N ++L + DEAD ML GF Q+
Sbjct: 125 HIIVGTAGRVADHLLDKSVYLNGLELLIFDEADRMLDLGFSAQL 168
>UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 657
Score = 60.1 bits (139), Expect = 5e-08
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPTRELAQQIQKVV 417
A +QGRD++A+A++G GKT F I I++ + S A+I+ PTREL QI+ V+
Sbjct: 196 AALQGRDLLAEAKTGAGKTLAFLIPIVEIVCRSGFRPSNGTAAIIIGPTRELCLQIEGVL 255
Query: 418 IALGDHLNAKCH--ACIGGTNVREDIRQLESGVM 513
+ L H N CIGG + ++ +L +G+M
Sbjct: 256 LKLLKHFNGSLTFLCCIGGQSRNQEGFKLANGIM 289
Score = 39.5 bits (88), Expect = 0.076
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VV +PGR+ D + H + L +DEAD +L GF++ + ++ +L + Q L
Sbjct: 290 IVVASPGRLLDHLKLTTDWHTKNLLLLAVDEADRVLDNGFEEDMREIVALLPKNRQTFL 348
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL- 438
G D++ QA+SGTGKT F++ I + + + Q+L + PTRE+A QI+ V+ +G +
Sbjct: 59 GLDLLVQAKSGTGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVP 118
Query: 439 NAKCHACIGGTNVREDIRQLES 504
N + + IGG ++ +D + L+S
Sbjct: 119 NFRAKSFIGGLDISQDRKNLQS 140
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
C VVGTPGR+ +I L+ + IK+ VLDEAD +++ K ++ + KML Q ++
Sbjct: 141 CSAVVGTPGRINHLIKSNVLNTSQIKILVLDEADSLITGSLKPEVDQIVKMLPTKRQTVV 200
Score = 34.3 bits (75), Expect = 2.9
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 116 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
P T D ++D ++ F M L E +LRG+ F PS IQ RAI
Sbjct: 11 PRTADVEFDLSLQ-FSKMFLSEPVLRGLTRNNFTHPSPIQARAI 53
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QGRD+I A++G+GKT F++ IL + + + AL+L PTRELA QI + ALG
Sbjct: 48 LQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSS 107
Query: 436 LNAKCHACIGG 468
+ + +GG
Sbjct: 108 IGVQSAVIVGG 118
Score = 40.3 bits (90), Expect = 0.043
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFK 656
H+++ TPGR+ D + + + +K V+DEAD +L+ F+ ++ + K
Sbjct: 133 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 182
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QG D++ QAQ+GTGKT F I +++++ + Q+LILAPTRELA Q+ + +
Sbjct: 37 LQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRG 95
Query: 436 LNAKCHACIGGTNVREDIRQLESG 507
+ GG + I+ L+ G
Sbjct: 96 QGVQVVTVFGGMPIERQIKALKKG 119
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSA 668
+VVGTPGRV D + RR L + I +LDEADEM++ GF D + + + A
Sbjct: 122 IVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPA 173
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QGRD+I A++G+GKT F++ IL + + + AL+L PTRELA QI + ALG
Sbjct: 59 LQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSS 118
Query: 436 LNAKCHACIGG 468
+ + +GG
Sbjct: 119 IGVQSAVIVGG 129
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+++ TPGR+ D + + + +K V+DEAD +L+ F+ ++ + K++ D + L
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFL 203
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 60.1 bits (139), Expect = 5e-08
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQ----ALILAPTRELAQQIQ 408
+Q RD+I A++G+GKTA F I +L I T I E A+ILAPTRELAQQI+
Sbjct: 426 LQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIE 485
Query: 409 KVVIALGDHLNAKCHACIGGTNVRED 486
+ I G L + A IGG + RED
Sbjct: 486 EETIKFGKPLGIRTVAVIGGIS-RED 510
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
C +V+ TPGR+ D++ R L + VLDEAD M+ GF+ + + + + Q
Sbjct: 519 CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQ 575
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 59.7 bits (138), Expect = 7e-08
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID--TSI-RECQALILAPTRELAQQIQKVVIAL 426
+QGRD++ AQ+G+GKTA F I +L ++ TS + +ALIL PTRELAQQ+ V
Sbjct: 79 LQGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTY 138
Query: 427 G-DHLNAKCHACIGGTNVREDIRQLESGV 510
D C +GG I L+ GV
Sbjct: 139 SKDMRGLFCVPLVGGAPYNGQITALKKGV 167
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V+V TPGR+ D I + +++++ VLDEAD ML GF D I D+ + D Q I+
Sbjct: 169 VIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPIDRQTIM 226
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 59.7 bits (138), Expect = 7e-08
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQALILAPTRELAQQIQKVVI 420
+ G D++ AQ+GTGKTA F+I +LQ ++ R+ ++LI+ PTRELA QI +
Sbjct: 117 LDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFK 176
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
A G H GG N L+ G+
Sbjct: 177 AYGRHTGLTSTVIFGGVNQNPQTASLQKGI 206
Score = 52.8 bits (121), Expect = 8e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 665
+++ TPGR+ D++ + LH I+ FVLDEAD ML GF IHD+ K+L+
Sbjct: 208 ILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGF---IHDIRKILA 255
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 59.7 bits (138), Expect = 7e-08
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QG+D + +A++GTGKTA F+I LQ + ++ Q LIL P REL +QI + I LG
Sbjct: 40 LQGQDALVRAKTGTGKTAAFAIPALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKG 99
Query: 436 L-NAKCHACIGG 468
L N + GG
Sbjct: 100 LENFRVAEVTGG 111
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V+ TPGR+ D+ + L++N I + V+DEAD + GF++ + + K L VQ +L
Sbjct: 126 VISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFDMGFREAVTSILKDLPKSVQTVL 183
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRA--IMPSSKDAMLSLK 283
F D+ LK+ +L IY G++KP+ IQ ++ I+ +DA++ K
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAK 50
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 59.7 bits (138), Expect = 7e-08
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIAL----- 426
G DVIAQA+SGTGKT TF + L+++D R QAL LAPTRE A Q + + +
Sbjct: 74 GCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALALAPTRECAVQTHECFVEMIEKFK 133
Query: 427 ---GDHLNAKCHAC--IGGTNVREDIRQLES 504
GD C +GG V+ED +L S
Sbjct: 134 DMDGD-ARGGIETCLLVGGLPVKEDRARLAS 163
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
HVVVGTPGR M+ ++ + +L +LDEAD +LS F+ + + ML QV
Sbjct: 166 HVVVGTPGRTRQMLEEGSMACDGARLLILDEADALLSGTFERDVLFAYSMLPERKQV 222
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
++IAQA +G+GKTATF++++L ++DT I Q + L PTRELA+Q Q VV LG
Sbjct: 152 NLIAQAHNGSGKTATFALAMLGKVDTRIIHPQCMCLCPTRELARQNQDVVNELG 205
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG--FKDQIHDVFKMLSADVQVIL 686
+++ TPG++ D + +R+ +KL V+DEADEM+ Q+ + K ++Q++L
Sbjct: 230 IIICTPGKMQDFLKKRSFPTEFMKLMVIDEADEMIDHRNMMASQVGQIRKFFRQNLQILL 289
Score = 36.3 bits (80), Expect = 0.71
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
+ D+NL +LL+GIY GF +PS IQ A+
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAAL 143
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 59.7 bits (138), Expect = 7e-08
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
++IAQ+QSGTGKTA F++ +L +D SI QA+ ++PT+ELA Q +V+ +G N K
Sbjct: 110 NLIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
Score = 46.0 bits (104), Expect = 9e-04
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +2
Query: 149 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAAL 101
Score = 42.3 bits (95), Expect = 0.011
Identities = 19/59 (32%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS-RGFKDQIHDVFKMLSADVQVIL 686
V++GTPG++ + + ++ L +K+ VLDEAD ++ + +QI + ++L ++V+V L
Sbjct: 187 VIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKVCL 245
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 59.7 bits (138), Expect = 7e-08
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELAQQIQKVV 417
++GRD+I +A++GTGKT F I I+ +I R L+LAPTRELA+Q++K
Sbjct: 139 MEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEF 198
Query: 418 IALGDHLNAKCHACIGGTNVREDIRQLESGV 510
L+ C GGT + + +RQL+ GV
Sbjct: 199 RESAPSLDTIC--LYGGTPIGQQMRQLDYGV 227
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
V VGTPGRV D++ R AL+ + ++ VLDEAD+ML GF + + + + L
Sbjct: 229 VAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 278
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 59.7 bits (138), Expect = 7e-08
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++VVGTPGR+ D I R L+ +K F+LDEADEML+ GF + + + D +++L
Sbjct: 125 NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILL 183
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/79 (34%), Positives = 51/79 (64%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
+++AQA++G+GKTA+F+I +++ ++ + +A+IL PTRELA Q+ + +L + N K
Sbjct: 46 NIVAQARTGSGKTASFAIPLIELVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLK 104
Query: 448 CHACIGGTNVREDIRQLES 504
GG + I+ L++
Sbjct: 105 IAKIYGGKAIYPQIKALKN 123
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 59.3 bits (137), Expect = 9e-08
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKVVIALG 429
+ GRDV+A A++G+GKTA F I + +++ T + +ALIL+PTRELA Q Q+ + +G
Sbjct: 73 LDGRDVVAMARTGSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIG 132
Query: 430 DHLNAKCHACIGGTNV 477
K +GG ++
Sbjct: 133 RFTGLKSSVILGGDSM 148
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR + ++ +I+ + DEAD + GF +QIH++ L + Q +L
Sbjct: 161 IIVATPGRFLHICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIHEIANRLPKNRQTLL 218
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 59.3 bits (137), Expect = 9e-08
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+V+ TPGR+ D + R ++H + IK+ VLDEADEML GF++ + + K AD Q I+
Sbjct: 131 IVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTPADRQTIM 188
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G+D+I AQ+GTGKTA F+I ++ ++ + QALIL PTREL Q+ + L +
Sbjct: 44 LKGKDIIGHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKY 103
Query: 436 L-NAKCHACIGGTNVREDIRQL 498
N + GG + +R L
Sbjct: 104 KGNFEVVPIYGGQEIERQLRAL 125
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 59.3 bits (137), Expect = 9e-08
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Frame = +1
Query: 223 FCNPATRNN--AFIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILA 378
+C P + A + G+D+I +A +GTGKTA F + ++ ++ R +ALILA
Sbjct: 116 YCTPIQEQSLEAVLAGKDLIGKANTGTGKTAVFLVGVMARLLADKKGGLGKRTPRALILA 175
Query: 379 PTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
PTREL QI K LG + A GG + + L+ G
Sbjct: 176 PTRELVMQIVKDAKKLGRYTGVNADAVYGGAEYEKQMELLKRG 218
Score = 41.1 bits (92), Expect = 0.025
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 665
+VV TPGR+ D +R ++ + + V+DEAD ML GF I DV +++S
Sbjct: 222 IVVATPGRLIDFHNKRLVNFDNCQTLVIDEADRMLDMGF---IPDVRRIVS 269
>UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 617
Score = 59.3 bits (137), Expect = 9e-08
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 17/98 (17%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI---DTSIREC--------------QALILAPT 384
++G+D++AQA++GTGKT F I ++Q+I D S++E +A+I++PT
Sbjct: 13 LKGKDLVAQAKTGTGKTLAFLIPVIQKILDADPSLKEVSRGRPRRFAQRQSIKAIIISPT 72
Query: 385 RELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQL 498
RELA+QI K L +GGT RE +R++
Sbjct: 73 RELAEQIGKEATRLCQRNGVTVQTAVGGTGKRESLRRI 110
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRR--ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADV 674
E CH++VGTPGR+ D+++ + A+ ++ VLDEAD ML GF++++ + ML
Sbjct: 113 EGCHLLVGTPGRLNDLLSDELSGIDASNVQALVLDEADRMLDVGFENELRSIVDMLPDRQ 172
Query: 675 QV 680
QV
Sbjct: 173 QV 174
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 59.3 bits (137), Expect = 9e-08
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
+++GTPGRV D I R+ L + + L VLDEAD+ML GF++ I ++ + + Q ++L
Sbjct: 126 IIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQTVIL 184
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G DV QA +GTGKTA F I ++ + R Q ++L P+RELA Q+ + L H
Sbjct: 39 LAGNDVAGQAYTGTGKTAAFGIPAIELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMH 98
Query: 436 LNA-KCHACIGGTNVREDIRQLESGV 510
GG + I+ L GV
Sbjct: 99 KKGISILPVYGGQPIERQIKALSRGV 124
>UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Shewanella oneidensis
Length = 439
Score = 59.3 bits (137), Expect = 9e-08
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Frame = +1
Query: 223 FCNP--ATRNNAFIQGRDVIAQAQSGTGKTATFSISILQQIDTS-------IRECQALIL 375
FC P A +Q +D+ QAQ+GTGKT F ++ + +S + + +A+I+
Sbjct: 31 FCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSSSIPEGRQLNQPRAIIM 90
Query: 376 APTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
APTRELA QI K I L H K GG + + L+ GV
Sbjct: 91 APTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQGV 135
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVF-KMLSADVQVILL 689
+++GT GR+ D + + ++ N I+ VLDEAD M GF I +F +M +AD ++ +L
Sbjct: 137 ILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDIRFLFRRMPNADQRLNML 196
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 59.3 bits (137), Expect = 9e-08
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIAL 426
+ GRD+ A A +G+GKTA F++ L+++ + + LIL PTRELA QI ++ L
Sbjct: 202 LTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNL 261
Query: 427 GDHLNAKCHACIGGTNVRE 483
+ KC +GG +VRE
Sbjct: 262 AQFTDIKCGLIVGGLSVRE 280
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRR-ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VV TPGR+ D + ++ + + + +LDEAD +L GF +I ++ ++ Q +L
Sbjct: 291 IVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTML 349
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 59.3 bits (137), Expect = 9e-08
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 665
CH++V TPGR+ DMITR + I+ VLDEAD ML GF+ QI + + L+
Sbjct: 429 CHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLN 481
Score = 50.0 bits (114), Expect = 5e-05
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 15/99 (15%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI--------DTSIRECQ-------ALILAPTRE 390
I GRD++A AQ+G+GKTA F + IL Q+ S R+ L+LAPTRE
Sbjct: 330 INGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRE 389
Query: 391 LAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
LA QI + + GG N E +R+L+ G
Sbjct: 390 LATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRG 428
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G+++I +Q+GTGKT + + +L + + + QALILAPT+ELA QI +V L
Sbjct: 37 LDGQNLIVHSQTGTGKTLAYLLPMLTKTEELPEQTQALILAPTQELAMQIVEVAKQLTAT 96
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
+ IGG N++ + +L+
Sbjct: 97 TSITVLPLIGGANIKRQVEKLK 118
Score = 41.5 bits (93), Expect = 0.019
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML 617
HV VGTPGR+ +++ + L +K+ V+DEAD M+
Sbjct: 123 HVAVGTPGRILELMEMKKLKVPHVKMIVVDEADRMM 158
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-----CQALILAPTRELAQQIQKVVI 420
++GRD++ AQ+GTGKTA+F++ +L ++ + R + L+LAPTREL QI
Sbjct: 42 LEGRDLLGLAQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFE 101
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
+ H + GG + ++ LE GV
Sbjct: 102 SFSRHQPVRVTTIFGGVSQVHQVKALEEGV 131
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
E ++V PGR+ D+I + + ++ VLDEAD+ML GF I + L D
Sbjct: 129 EGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDRHT 188
Query: 681 IL 686
+L
Sbjct: 189 VL 190
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HVVV TPGR+ D++ R L + +K VLDEADEM++ GFK +I ++ K + +L
Sbjct: 22 HVVVATPGRLIDLLNRGVLSLDDLKYLVLDEADEMINMGFKAEIDEILKSCKPAITKLL 80
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G D+IAQAQ+GTGKTA F + I+ + + L++ PTRELA Q+ + G
Sbjct: 36 LEGHDMIAQAQTGTGKTAAFGLPIMSMMKAD-GSVEGLVIVPTRELAMQVSDELFRFGKL 94
Query: 436 LNAKCHACIGGTNVREDIRQLE 501
K GGT + I +++
Sbjct: 95 SGLKTATVYGGTAYGKQIERIK 116
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VV TPGR+ D++ + N VLDEADEML GF D+I ++F L + Q ++
Sbjct: 120 IVVATPGRLQDLLMSGKIKLNP-HFVVLDEADEMLDMGFLDEIKNIFTFLPKERQTLM 176
>UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 382
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/84 (30%), Positives = 52/84 (61%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A ++G+D++A++ +G+GKT + + +L +++ + ++ Q LI+AP++ELA QI +V+
Sbjct: 30 AMLEGKDIVAESPTGSGKTLAYVLPLLNKVNGAKKQTQGLIVAPSQELAMQIVEVIREWT 89
Query: 430 DHLNAKCHACIGGTNVREDIRQLE 501
+ IGG N I +L+
Sbjct: 90 AGTDITVQQLIGGANSARQIEKLK 113
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
+VVGTPGR+ ++ L I+ +LDE D++LSR ++ I + + QV+++
Sbjct: 118 IVVGTPGRLNELARAGKLKLKEIETVILDECDQLLSREYRVVIKSFIEGSAFGRQVVVV 176
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/83 (36%), Positives = 48/83 (57%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A ++GRD++ + +G+GKT F I I++ + + ALI+ PTRELA QI + +L
Sbjct: 88 ALLEGRDLLGISNTGSGKTGAFLIPIIEHALKNPGQFTALIVTPTRELALQIDQEFKSLS 147
Query: 430 DHLNAKCHACIGGTNVREDIRQL 498
+ IGGTN+ D++ L
Sbjct: 148 KGMRLHSATFIGGTNINTDMKVL 170
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
HV+VGTPGR+ D+ R+ L N +K VLDE D ML GF ++DV K++ Q
Sbjct: 175 HVIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLDMGF---VNDVKKLVGGMTQ 227
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPTRELAQQIQKVVIALG 429
++GRDV+A A++G+GKTA F I + +++ + +ALIL+PTRELA Q K + LG
Sbjct: 74 LEGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELG 133
Query: 430 DHLNAKCHACIGGTNV 477
+ K +GG ++
Sbjct: 134 RFMELKSILVLGGDSM 149
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
V+V TPGR + L N+I+ V DEAD + GF +Q+++ L + Q ++
Sbjct: 162 VIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVM 219
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID--------TSIRECQALILAPTRELAQQIQK 411
+Q RD+I A++G+GKTA+F I +L I T QALIL PTRELAQQI+
Sbjct: 302 LQNRDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIET 361
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
L +C + +GG ++ + L G
Sbjct: 362 ETNKFAGRLGLRCVSIVGGRDMNDQAYALRDG 393
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
+V+ TPGR+ D I R L + V+DEAD+M+ GF+ Q++ + L
Sbjct: 396 IVIATPGRLKDCIERHVLVLSQCTYVVMDEADKMVDMGFEPQVNFILDSL 445
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTS--IRECQA---LILAPTRELAQQIQKV 414
A + GRD+I A++G+GKT +F + +L+ I +R LI+ PTRELA QI K
Sbjct: 350 AIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKE 409
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ LN C GG+++ I +L+ G
Sbjct: 410 LNHFTKKLNISSCCCFGGSSIESQIAELKKG 440
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
++VGTPGR+ D++ R + + VLDEAD M GF+ Q+ VF + D Q +
Sbjct: 443 IIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRVRPDRQTV 502
Query: 684 L 686
L
Sbjct: 503 L 503
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 405
+ G DV+ AQ+G+GKTA F++ +L QID S + Q L++APTRELA Q+
Sbjct: 40 LNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQV 89
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
VVVGTPGR+ D I R L+ + ++ VLDEADEML GF D + V L + Q L
Sbjct: 127 VVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPENHQTAL 184
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 155 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
TF+D+ L E +L+ + GFE PS IQQ I
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCI 36
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE----CQALILAPTRELAQQIQKVVIA 423
++GRD++A A++G+GKTA F I + +++ IR+ +ALIL+PTRELA Q K +
Sbjct: 71 LEGRDIVAMARTGSGKTACFLIPLFEKL--KIRQAKVGARALILSPTRELALQTLKFIKE 128
Query: 424 LGDHLNAKCHACIGGTNV 477
LG K +GG N+
Sbjct: 129 LGRFTGLKATIILGGDNM 146
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++ TPGR + L N I+ V DEAD + GF +QI+++ L Q +L
Sbjct: 159 ILIATPGRFLHICIEMDLQLNNIEYVVFDEADRLFEMGFGEQINEIINRLPESRQTLL 216
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIAL 426
++GRDVIA AQ+GTGKTA + + IL ++ + + A+I+APTRELAQQI + V
Sbjct: 36 LEGRDVIACAQTGTGKTAAYLLPILDRLSAGEFASDVVNAVIMAPTRELAQQIDQQVEGF 95
Query: 427 GDHLNAKCHACIGGTN 474
+ A GGT+
Sbjct: 96 SYFMPVSAVAIYGGTD 111
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+V+ TPGR+ + + + + FVLDEAD ML GF D I ++K L + Q ++
Sbjct: 128 IVIATPGRLISHLNLGSADLSHVSYFVLDEADRMLDMGFFDDIMQIYKQLPSSCQTVM 185
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 58.4 bits (135), Expect = 2e-07
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTS---IRECQALILAPTRELAQQIQKVVIAL 426
++G DV+ AQ+GTGKTA+F++ +LQ++ S R ++LIL PTRELA Q+ +
Sbjct: 326 LKGHDVLGVAQTGTGKTASFTLPMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLY 385
Query: 427 GDHLNAKCHACIGGTNVREDIRQLESGV 510
G +L IGG ++ E L GV
Sbjct: 386 GKYLRLTHALLIGGESMAEQRDVLNRGV 413
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
V++ TPGR+ D+ R L V+DEAD ML GF I + +L A Q +
Sbjct: 415 VLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHRQTL 471
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSI---SILQQIDTSIRECQALILAPTRELAQQIQKVVIAL 426
+ GRDV+ AQ+GTGKTA+F++ IL R ++LIL PTRELA Q+ + +
Sbjct: 258 LMGRDVLGCAQTGTGKTASFTLPMMDILSDRRARARMPRSLILEPTRELALQVAENFVKY 317
Query: 427 GDHLNAKCHACIGGTNVREDIRQLESGV 510
G +L IGG ++ + L GV
Sbjct: 318 GQYLKLNHALLIGGESMNDQRDVLSKGV 345
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
V++ TPGR+ D+ R L ++ V+DEAD ML GF + + +L + Q +
Sbjct: 347 VLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPHNRQTL 403
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 417
RDV+ AQ+GTGKTA F + +L +D R QAL+LAPTRELA Q + +
Sbjct: 83 RDVVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAI 133
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
VVVGTPGRV D+I + AL + +++ VLDEADEML GF + + +
Sbjct: 167 VVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAEDVETI 212
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQ---IDTS---IRECQALILAPTRELAQQIQK 411
A + G D A A +GTGKTA + + LQ+ +D S +R +AL L PTRELA Q+++
Sbjct: 35 AVLSGTDTYAIAPTGTGKTAAYLLPTLQELSRVDNSAEQVRPVRALFLVPTRELAVQVEE 94
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ G LN + + GG + + + + G
Sbjct: 95 SIAKYGKGLNLRTISVFGGVRIPSQVNRFKRG 126
Score = 41.1 bits (92), Expect = 0.025
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VV TP R+ D++ +A +K FV+DEAD ++S G ++ + + Q IL
Sbjct: 129 IVVATPRRLVDLLKVKAFSLEQVKHFVMDEADRLVSMGIVAELRTILAAMPQAKQQIL 186
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VV TP R+YD++ RRA+ +I+ FV+DE D ML GFK Q++++ ++L + Q I+
Sbjct: 131 IVVATPRRLYDLVLRRAVQLKSIQKFVIDEVDVMLDLGFKFQVNNIIELLPKNRQSIM 188
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 NAFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC-QALILAPTRELAQQIQKVVIA 423
++ + GRDV+ AQ+GTGKT + + +L+ + S ++ + LI+ PTREL Q+ + +
Sbjct: 41 SSIMSGRDVVGIAQTGTGKTFAYLLPLLRMLKYSEQKNPRILIMVPTRELVVQVVEEIEK 100
Query: 424 LGDHLNAKCHACIGGTNVREDIRQLESGV 510
L ++N + GG N+ + L G+
Sbjct: 101 LAKYINLRVAGVYGGVNINTQHQDLMQGL 129
>UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=3;
Paramecium tetraurelia|Rep: Nucleolar RNA helicase II,
putative - Paramecium tetraurelia
Length = 664
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS-ADVQVI 683
C +VVGTPGR+ D++ R+ L + I++ VLDEAD+ML+ GF++ I + + +Q++
Sbjct: 149 CEIVVGTPGRIQDLLERKVLKLDEIQVVVLDEADQMLNFGFQENIEKIMSYFNERKIQML 208
Query: 684 L 686
L
Sbjct: 209 L 209
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQ---ALILAPTRELAQQI-QKVVIAL 426
G D+I Q ++G+GKT + + IL++I +++ + L+L PTRELA Q+ + L
Sbjct: 62 GDDIIGQDRTGSGKTLAYCLPILERIRGLGLKQNKNPYVLVLLPTRELAIQVTTEFNTIL 121
Query: 427 GDHLNAKCHACIGGTNVREDIRQLESG 507
+ ++ GGT++R I Q+ G
Sbjct: 122 HKENEYRIYSIYGGTDLRNQIDQVRQG 148
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 405
++G DV+A A++G+GKTA F I ILQ + T ++ ALI+ PTRELA QI
Sbjct: 36 LEGNDVVACAKTGSGKTAAFLIPILQSLMTELKPLYALIITPTRELAHQI 85
Score = 34.3 bits (75), Expect = 2.9
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRR--ALHANTI----------KLFVLDEADEMLSRGFKDQIHDVF 653
H++V TPGR+ D++ + A AN K+ VLDEAD +L F + +
Sbjct: 124 HIIVSTPGRLADLLRTQIAAQEANVTDKQEWTLSRTKVVVLDEADRLLEDNFGKDLTIIM 183
Query: 654 KMLSADVQVILL 689
K L Q +LL
Sbjct: 184 KALPKRRQTLLL 195
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,064,273
Number of Sequences: 1657284
Number of extensions: 17202103
Number of successful extensions: 54151
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 49757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53345
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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