Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20654
(691 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 139 3e-34
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 134 1e-32
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 85 7e-18
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 67 2e-12
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 60 2e-10
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 60 3e-10
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 59 5e-10
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 58 1e-09
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 56 4e-09
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 54 3e-08
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 53 3e-08
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 51 2e-07
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 50 2e-07
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 49 7e-07
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 48 2e-06
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 47 2e-06
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 47 2e-06
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 46 5e-06
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 46 5e-06
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 43 5e-05
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 42 6e-05
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 39 6e-04
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 38 0.002
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos... 34 0.022
SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo... 30 0.27
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 29 0.63
SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 28 1.5
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 27 1.9
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 27 2.6
SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual 27 3.4
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 27 3.4
SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein P... 26 4.5
SPAP27G11.02 |||TPR repeat protein, unknown biological role|Schi... 26 4.5
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual 26 5.9
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 26 5.9
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 26 5.9
SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces p... 26 5.9
SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces po... 25 7.8
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 25 7.8
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 139 bits (337), Expect = 3e-34
Identities = 64/82 (78%), Positives = 77/82 (93%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 444
RDV+AQAQSGTGKTATFSIS+LQ+IDTS+++CQALILAPTRELAQQIQKVV+ALGD +N
Sbjct: 57 RDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNV 116
Query: 445 KCHACIGGTNVREDIRQLESGV 510
+CHACIGGT VR+D+ L++GV
Sbjct: 117 ECHACIGGTLVRDDMAALQAGV 138
Score = 93.9 bits (223), Expect = 2e-20
Identities = 42/60 (70%), Positives = 52/60 (86%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HVVVGTPGRV+DMI RRAL + +++FVLDEADEMLSRGFKDQI+D+F++L QV+LL
Sbjct: 139 HVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLL 198
Score = 81.8 bits (193), Expect = 8e-17
Identities = 34/48 (70%), Positives = 44/48 (91%)
Frame = +2
Query: 110 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
++ ++T++D+V++TFDDMNLK ELLRGIYAYGFE+PSAIQQRAIMP
Sbjct: 5 LEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMP 52
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 134 bits (324), Expect = 1e-32
Identities = 66/94 (70%), Positives = 78/94 (82%), Gaps = 3/94 (3%)
Frame = +1
Query: 235 ATRNNAFIQ---GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 405
A ++ A IQ GRDVIAQAQSGTGKTATFSI ILQ ID S+R+ QALIL+PTRELA QI
Sbjct: 46 AVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQI 105
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
Q VV+ALGDH+N +CHACIGGT+V DI++L+ G
Sbjct: 106 QNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYG 139
Score = 76.6 bits (180), Expect = 3e-15
Identities = 32/60 (53%), Positives = 46/60 (76%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HVV GTPGRV DMI RR L +K+ +LDEADE+L++GFK+QI+D+++ L QV+++
Sbjct: 141 HVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVV 200
Score = 58.4 bits (135), Expect = 9e-10
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +2
Query: 110 MDPGTLDTDWD-QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPSSK 262
M+ L T D V +F++MNLKE+LLRGIYAYG+E PSA+Q RAI+ K
Sbjct: 6 MENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICK 57
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 85.4 bits (202), Expect = 7e-18
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ GRD++A+A++GTGKTA F I L+++DT + Q LIL PTRELA Q +V LG H
Sbjct: 79 LSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKH 138
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
+N K GGT +R+DI +L V
Sbjct: 139 MNVKVMVTTGGTTLRDDIIRLNDTV 163
Score = 44.4 bits (100), Expect = 2e-05
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VVGTPGRV D+ + + FV+DEAD++LS F I + + Q+ L
Sbjct: 164 HIVVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISL 222
Score = 42.3 bits (95), Expect = 6e-05
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 62 KNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET----FDDMNLKEELLRGIYAYGFEKPSA 229
+N D+ S+ G P + + V +T F+D LK ELL GI+ GFE+PS
Sbjct: 10 ENANLNDRESFKGQMKAQPVDMRPKTEDVTKTRGTEFEDYYLKRELLMGIFEAGFERPSP 69
Query: 230 IQQRAI 247
IQ+ +I
Sbjct: 70 IQEESI 75
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/61 (49%), Positives = 46/61 (75%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 444
R++I Q+QSGTGKTA F++++L ++D S+ + QA+ LAP+RELA+QI VV +G +
Sbjct: 154 RNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEV 213
Query: 445 K 447
K
Sbjct: 214 K 214
Score = 56.8 bits (131), Expect = 3e-09
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVIL 686
+V+GTPG V D++ RR L A IK+FVLDEAD ML +G DQ + +L + Q++L
Sbjct: 233 IVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVL 291
Score = 43.6 bits (98), Expect = 3e-05
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +2
Query: 149 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
V++F+++ LK ELL+GIY+ F+KPS IQ++A+
Sbjct: 113 VKSFEELELKPELLKGIYSMKFQKPSKIQEKAL 145
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 60.5 bits (140), Expect = 2e-10
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++GR+ I A++G+GKTA F++ I+++ ALIL PTRELA QI + ALG +
Sbjct: 42 LEGRNCIGGAKTGSGKTAAFALPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGAN 101
Query: 436 LNAKCHACIGGTN-VREDI 489
LN K +GG + +R+ I
Sbjct: 102 LNLKHALIVGGMDMIRQSI 120
Score = 46.4 bits (105), Expect = 4e-06
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHA----NTIKLFVLDEADEMLSRGFKDQIHDVFKML--SAD 671
HVVV TPGR+ D+I IK V+DEAD +LS F D + D F +L S D
Sbjct: 127 HVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASED 186
Query: 672 VQVIL 686
Q +L
Sbjct: 187 RQTLL 191
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 60.1 bits (139), Expect = 3e-10
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I G DV+ QA+SG GKTA F +S LQQI+ E L+L TRELA QI+ +
Sbjct: 86 ILGTDVLCQAKSGMGKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKY 145
Query: 436 L-NAKCHACIGGTNVREDI 489
L + + GG N+++D+
Sbjct: 146 LPDVRTAVFYGGINIKQDM 164
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVIL 686
H+VV TPGR+ ++ + L N++K FVLDE D++L S + I +VF+ QV++
Sbjct: 175 HIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMM 234
Score = 33.1 bits (72), Expect = 0.039
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPS 256
F D LK ELLR I GFE PS +QQ I S
Sbjct: 53 FRDFLLKPELLRAITDSGFEHPSEVQQVCIPQS 85
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 59.3 bits (137), Expect = 5e-10
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 444
RDVI AQ+G+GKTA F++ ++Q++ + A++LAPTRELA QI + A+G +
Sbjct: 84 RDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVLAPTRELAYQISEQFEAIGGSIGV 143
Query: 445 KCHACIGGTNV 477
+ +GG ++
Sbjct: 144 RSVVIVGGMDM 154
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HV+V TPGR+ D + + +K ++DEAD +L F I + K++ + + +L
Sbjct: 166 HVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLL 225
Score = 31.5 bits (68), Expect = 0.12
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +2
Query: 14 MSYSSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLR 193
M+ S ++ +ED S N + S + D+ ++ +TF ++ + +EL
Sbjct: 1 MAPSEKKLTEDKKNSSLNKKIETSNS-SSEKSSENNNGDSQNNEAPKTFKELGVIDELCE 59
Query: 194 GIYAYGFEKPSAIQQRAI 247
GF+ P+ IQQ AI
Sbjct: 60 ACEKLGFKTPTPIQQEAI 77
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 58.0 bits (134), Expect = 1e-09
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSI--RECQALILAPTRELAQQIQKVVIALG 429
++GRDV+ A++G+GKTA F I +++ + +++ +ALIL+P RELA Q KVV
Sbjct: 104 LEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFS 163
Query: 430 DHLNAKCHACIGGTNVREDIRQL 498
+ + A +GG ++ E L
Sbjct: 164 KGTDLRSVAIVGGVSLEEQFSLL 186
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VV TPGR + L ++I+ V DEAD + GF Q+ ++ L Q +L
Sbjct: 192 IVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLL 249
Score = 31.5 bits (68), Expect = 0.12
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
F M L + LLR I+ GF+ P+ IQ++ I
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTI 100
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 56.4 bits (130), Expect = 4e-09
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQALILAPTRELAQQIQKVV 417
++G+D++AQA++G+GKTA + I IL+ QID + R AL+L PTRELAQQ+ V+
Sbjct: 49 LEGKDLVAQARTGSGKTAAYLIPILELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVL 108
Query: 418 IALGDHLNAKCHACIGGTNV 477
+ L A C I NV
Sbjct: 109 ----EKLTAFCSKHIRFINV 124
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
+V+ TP R + L + +K V+DEAD MLS G+ + + + + L Q L+
Sbjct: 143 IVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGTQSFLM 201
Score = 32.7 bits (71), Expect = 0.051
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 152 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
+TF D NL L R I+ FEKP+++Q I
Sbjct: 14 KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETI 45
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 53.6 bits (123), Expect = 3e-08
Identities = 27/85 (31%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID----TSIRECQALILAPTRELAQQIQKVVIA 423
++GRD++ A++G+GKT F + +++ + TS+ AL+++PTRELA Q + ++
Sbjct: 74 LKGRDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVK 133
Query: 424 LGDHLNAKCHACIGGTNVREDIRQL 498
+G + IGG N +E+ +L
Sbjct: 134 IGRLHSFSAGLIIGGNNYKEEKERL 158
Score = 34.3 bits (75), Expect = 0.017
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++V TPGR+ I + + +++ +LDEAD +L GF+ + + L Q +L
Sbjct: 162 NILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTML 221
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 53.2 bits (122), Expect = 3e-08
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKVVIALGD 432
G+D++ A +G+GKTA F + IL+++ + + LIL PTRELA Q V +
Sbjct: 296 GKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIAS 355
Query: 433 HLNAKCHACIGGTNVREDIRQL 498
+ CIGG +++ ++L
Sbjct: 356 FTDIMVCLCIGGLSLKLQEQEL 377
Score = 43.6 bits (98), Expect = 3e-05
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 513 VVVGTPGRVYD-MITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+V+ TPGR D M + I++ V+DEAD ML GF D+++++ + Q +L
Sbjct: 383 IVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTML 441
Score = 31.9 bits (69), Expect = 0.090
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 155 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
+F MNL +L+G+ GFE P+ IQ + I
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTI 290
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 50.8 bits (116), Expect = 2e-07
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT--SIRECQ------ALILAPTRELAQQIQK 411
+Q +D+I A++G+GKTA F I ++ I + E A++LAPTRELAQQIQ
Sbjct: 284 LQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQV 343
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ L +C + +GG E Q+ G
Sbjct: 344 EGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQG 375
Score = 49.2 bits (112), Expect = 6e-07
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
H+VV TPGR+ D + RR + V+DEAD ML GF+D ++ + L
Sbjct: 377 HIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSL 427
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 50.4 bits (115), Expect = 2e-07
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKVVIALGDH 435
G D+I +A +G+GKT F I IL+ + + QAL++APTRELA QI + +
Sbjct: 159 GFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTRELAHQICQHFELIKPS 218
Query: 436 LNAKCHACIGGTNVREDIRQL 498
N + + GG V++ R L
Sbjct: 219 PNIRVMSITGGLAVQKQQRLL 239
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHAN--TIKLFVLDEADEMLSRGFKDQIHDVFKML 662
HVVV TPGR++ +I L N IK VLDEAD +L + +++ + ++L
Sbjct: 244 HVVVATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEIL 296
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 48.8 bits (111), Expect = 7e-07
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
C ++ TPGR+ D+I R + IK VLDEAD ML GF+ QI +
Sbjct: 306 CDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHI 353
Score = 40.7 bits (91), Expect = 2e-04
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Frame = +1
Query: 232 PATRNNAFI--QGRDVIAQAQSGTGKTATFSISIL--------------QQIDTSIRECQ 363
P +N+ I GRD++A AQ+G+GKTA F IL Q R +
Sbjct: 194 PVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRK 253
Query: 364 A----LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
A LILAPTREL QI + + A GG ++R IRQ++ G
Sbjct: 254 AYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQG 305
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+ + TPGR+ DM+ + + VLDEAD ML GF+ QI + + D Q ++
Sbjct: 248 ICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVM 305
Score = 41.5 bits (93), Expect = 1e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 420
+ GRD++ + +G+GKT ++ + + I+ L+LAPTRELA QIQ+
Sbjct: 157 MSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECT 216
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
G + GG IR L GV
Sbjct: 217 KFGKSSRIRNTCVYGGVPRGPQIRDLIRGV 246
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 149 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRA 244
V TF++ +L+ + GFE P+ IQQ+A
Sbjct: 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQA 152
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 47.2 bits (107), Expect = 2e-06
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKV 414
A GRDVI A++G+GKT F + + + I ++ + A+I+ PTRELA QI +
Sbjct: 451 AITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRE 510
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESG 507
LN + GG +++ I L+ G
Sbjct: 511 CKPFLKLLNIRACCAYGGAPIKDQIADLKRG 541
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
+VV TPGR+ D+++ R + + VLDEAD M GF+ Q+ + + D Q +
Sbjct: 544 IVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTV 603
Query: 684 L 686
L
Sbjct: 604 L 604
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +2
Query: 134 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPSSKDAM-LSLKPSQELEK 304
D + V ++ L + + I + G+EKP++IQ +AI + S +D + ++ S +
Sbjct: 412 DCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIA 471
Query: 305 LLLSLYR 325
LL ++R
Sbjct: 472 FLLPMFR 478
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 47.2 bits (107), Expect = 2e-06
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
V++GTPGR+ D+I ++ + + VLDEAD ML GF+ I ++
Sbjct: 288 VIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNI 333
Score = 45.2 bits (102), Expect = 9e-06
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPTRELAQQIQKVVIAL 426
+ GRDV+ A++G+GKT F I LQ ++ + + L+++PTRELA Q + + +L
Sbjct: 200 LAGRDVVGIAETGSGKTVAFGIPALQYLNGLSDNKSVPRVLVVSPTRELAIQTYENLNSL 259
Query: 427 GDHLNAKCHACIGGTNVREDIR 492
N K GG E R
Sbjct: 260 IQGTNLKAVVVYGGAPKSEQAR 281
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 46.0 bits (104), Expect = 5e-06
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIA 423
+ GRDV+ A++G+GKT F +I +L + R +I++PTRELA QI V
Sbjct: 124 LAGRDVLGAAKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKE 183
Query: 424 LGDHLNAKCHACIGGTNVREDIRQLESGV 510
L + + IGG N R + +L GV
Sbjct: 184 LLKYHHQTFGIVIGGANRRAEADKLVKGV 212
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++V TPGR+ D + + ++ V+DEAD +L GF+D++ + K+L ++ + L
Sbjct: 213 NLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTL 272
Query: 687 L 689
L
Sbjct: 273 L 273
Score = 32.7 bits (71), Expect = 0.051
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 149 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
+E F D+ L E + + I GFE + IQ+R+I P
Sbjct: 88 IEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPP 122
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 46.0 bits (104), Expect = 5e-06
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Frame = +1
Query: 226 CNPATRNNAFIQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPT 384
C PA N +D +AQ+G+GKT + + I+Q++ T A+I+APT
Sbjct: 169 CLPALLNT---DDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPT 225
Query: 385 RELAQQIQKVVIALGD----HLNAKCHACIGGTNVREDIRQLESGV 510
REL QQI V L + H C+ IGG + + ++ GV
Sbjct: 226 RELCQQIYNVANKLNNNPLSHWIVSCNV-IGGEKKKSEKARIRKGV 270
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
++++GTPGR+ D + AL + ++ VLDE D ++ GF++ + + L + +I
Sbjct: 271 NILIGTPGRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSII 329
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Frame = +1
Query: 253 FIQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQIQKV 414
F++ +D++ +A +G+GKT + + ++ DT ALI+APTRELA QI V
Sbjct: 35 FLKNKDLVVEAVTGSGKTLAYLLPCFDKVTRRDTDETGLGALIVAPTRELATQIFNV 91
Score = 40.3 bits (90), Expect = 3e-04
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
VV+GTPGR+ +M++ + + +++ +LDEAD ++ GF+ + + L
Sbjct: 135 VVIGTPGRLNEMLSH--ISSKHLEILILDEADTLIDMGFQRTLQSIISQL 182
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 42.3 bits (95), Expect = 6e-05
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQIDTSI-RECQALILAPTRELAQQIQK 411
RD++A A +G+GKT + ILQ++ + +A+I+APTREL +QI +
Sbjct: 84 RDLLACAPTGSGKTIAYLFPILQKLQLHVPGGYRAIIVAPTRELCEQIYR 133
Score = 31.5 bits (68), Expect = 0.12
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 519 VGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQ 638
+GTP R+ I + L ++ FV+DEAD + GF +Q
Sbjct: 171 IGTPMRLVQAI-QTGLSFEKVEFFVMDEADRLFEPGFIEQ 209
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 39.1 bits (87), Expect = 6e-04
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKVVIALGDHL 438
G DV A +G+GKT ++ I I+Q + ++ + +++ PTREL Q+ K
Sbjct: 173 GGDVCVSAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRELTVQVAKTFEYYMSGA 232
Query: 439 NAKCHACIGGTNVREDIRQL 498
+ A G ++R + QL
Sbjct: 233 GLQVCAWTGQKSLRHETYQL 252
Score = 36.7 bits (81), Expect = 0.003
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 665
V+V TPGR+ D I + ++ V+DEAD +L + F+D + V +S
Sbjct: 263 VLVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEIS 314
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 37.5 bits (83), Expect = 0.002
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Frame = +1
Query: 244 NNAFIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQIQ 408
N F + + QA++GTGKT F + + + + + ++IL+PTRELA QI
Sbjct: 70 NEVFPNEENAVVQAKTGTGKTLAFLLVAFKDVLKGKPRLNSSKIHSVILSPTRELALQIF 129
Query: 409 KVVIALGDHLNAKCHACIGG-TNVRED 486
+ L + IGG + +RE+
Sbjct: 130 EEARKLTYGTGIRVSYAIGGNSKMREE 156
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITR-RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLS 665
++++ TPGR+ D + R L + + F+LDEAD ++ GF + I ++ + ++
Sbjct: 165 NLLIATPGRLEDHLQNPRILESLSTDSFILDEADRLMDMGFAESILNIHEAVT 217
>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1063
Score = 33.9 bits (74), Expect = 0.022
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +1
Query: 217 KTFCNPATRNNAFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELA 396
KT+ + A N G VI + +GK+ + I ILQ + + A + PT+ LA
Sbjct: 311 KTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSL-LEDNQSTAFFVFPTKSLA 369
Query: 397 QQIQKVVI 420
Q +K +I
Sbjct: 370 QDQKKSLI 377
>SPBC27.02c |ask1|mug181|DASH complex subunit
Ask1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 30.3 bits (65), Expect = 0.27
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 125 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPSSKD 265
LDT+W V + NL+ + + I + F PS I + MPS D
Sbjct: 184 LDTNWQVQVTPREPKNLQSQEVMDIDSSPFVSPSPISMKMDMPSLND 230
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 29.1 bits (62), Expect = 0.63
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 128 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKP--SAIQQRAIMPSSKDAMLSLKPSQELE 301
DTDWD +V + D++L+ RGI A G + + Q+ A + SSK +LK ++
Sbjct: 618 DTDWDALV-SLSDLDLQN---RGIMALGARRKLLKSFQEVAPLVSSKKMNENLKAAKNQS 673
Query: 302 KLLLSLYRFYNKS 340
L+ ++ + S
Sbjct: 674 SESLTSFKGHTDS 686
>SPBC1198.06c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 466
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 122 TLDTDWDQVVETFDDMNLKEELLRGIYAYGF 214
T D WD E FDD N + +GI+ F
Sbjct: 281 TDDIAWDPQCEYFDDCNSDQTAFKGIFMQSF 311
>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 292 GTGKTATFSISILQQI----DTSIRECQALILAP-TRELAQQIQ 408
G G T F+ SILQQI + SI +C + +P R + ++IQ
Sbjct: 89 GKGSTCAFTSSILQQIQKSGERSIPKCIGMYTSPHLRSVCERIQ 132
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 324 DSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 425
D+ TNR + SSFD S P+N++G ++
Sbjct: 487 DAWTNRKRPGYSSSFDGSSQSTFNPSNNDGAHNT 520
>SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 301
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 99 DLREWTLGHLTPT 137
DLREWTLG L P+
Sbjct: 110 DLREWTLGFLQPS 122
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 534 RVYDMITRRALHANTIKLFVLDEADEM 614
++ + + R + A+T K+ +LDEAD M
Sbjct: 106 QIKNFASTRQIFASTFKMIILDEADAM 132
>SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein
Pvg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 389
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 438 QVITKSYHHLLNLLGQLSCGSQDQ 367
+++ KSYH+L N QLS ++DQ
Sbjct: 165 ELVDKSYHNLHNAWSQLSREAKDQ 188
>SPAP27G11.02 |||TPR repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -2
Query: 534 DLECPPPHDTTLQLANIFTDIGATNASMAFSIQVITKS 421
D+E PP LQ+AN+ GA + + + ++ ++
Sbjct: 103 DMESPPVQGIRLQMANLLASAGALHKAWSMYWDILERT 140
>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
Length = 613
Score = 25.8 bits (54), Expect = 5.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 403 IQKVVIALGDHLNAKCHACIGGTNVRED 486
++ + A+ DHL+ + CIG N+ ED
Sbjct: 134 VEMIRRAISDHLDLLNNCCIGIANLNED 161
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -2
Query: 498 QLANIFTDIGAT---NASMAFSIQVITKSYHHLLNLL 397
+L NIFT + N+ FS+ +++++Y H NLL
Sbjct: 598 KLQNIFTTLYTAWCHNSIAVFSLCLLSQNYEHAANLL 634
>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 608 ISFIKNKKFDGVGMKRTTSYHIIYTTWS-AHHHMTPLSSWRISSRTLVP 465
IS + K+ DG+GM T +I+ T + M L W S R +P
Sbjct: 158 ISEVHLKRLDGLGMYSTIQQYIVTTKEAICSAVMEDLHEWLFSIRQKLP 206
>SPAC5D6.08c |mes1||meiosis II protein Mes1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 101
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 119 QGPFPEVHRNYLDPSMAHFWNPLANL 42
Q P P VH ++ PS A NPL ++
Sbjct: 75 QNPPPSVHSSHKQPSKARSPNPLLSM 100
>SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -3
Query: 515 HMTPLSSWRISSRTLVPPMQAWHLAFK*SPRAITTF*ICWASSL 384
H TP S + LV +H+ F+ SP+ +T + W ++
Sbjct: 87 HFTPSSGFMNDPNGLVYTGGVYHMFFQYSPKTLTAGEVHWGHTV 130
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 644 MDLVLETSGQHFISFIKNKKFDGVGMKRTTSYHI 543
+D V E HF F+KN+ D + +R H+
Sbjct: 476 LDAVYERECNHFKKFVKNELKDSLESQRVDLRHL 509
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,130,630
Number of Sequences: 5004
Number of extensions: 70007
Number of successful extensions: 278
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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