Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20654
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 139 2e-33
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 139 2e-33
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 118 3e-27
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 118 3e-27
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 78 7e-15
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 69 3e-12
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 69 3e-12
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 69 4e-12
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 64 9e-11
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 62 4e-10
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 62 5e-10
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 56 3e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 55 4e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 55 4e-08
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 54 7e-08
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 54 7e-08
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 54 7e-08
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 53 2e-07
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 48 5e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 48 5e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 44 8e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 44 8e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 44 8e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 43 2e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 42 4e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 42 4e-04
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 42 4e-04
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 41 7e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 41 7e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 40 0.002
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 40 0.002
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 40 0.002
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 40 0.002
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 40 0.002
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 39 0.003
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 39 0.003
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.34
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 32 0.34
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.59
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 31 0.78
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 4.1
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.1
AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical ... 28 5.5
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 28 7.2
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z48584-8|CAK55179.1| 435|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z48584-7|CAH04712.1| 448|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z48584-2|CAA88477.2| 481|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 9.6
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 9.6
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 9.6
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 27 9.6
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 27 9.6
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 27 9.6
AC006792-2|AAF60742.3| 406|Caenorhabditis elegans Hypothetical ... 27 9.6
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 9.6
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 139 bits (336), Expect = 2e-33
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A ++ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 430 DHLNAKCHACIGGTNVREDIRQLESG 507
D++N +CHACIGGTN+ EDIR+L+ G
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYG 144
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HVV GTPGRV+DMI RR L IKL VLDEADEML++GFK+Q++D+++ L QV+LL
Sbjct: 146 HVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLL 205
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 146 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV 57
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 139 bits (336), Expect = 2e-33
Identities = 64/86 (74%), Positives = 77/86 (89%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
A ++ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59 AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118
Query: 430 DHLNAKCHACIGGTNVREDIRQLESG 507
D++N +CHACIGGTN+ EDIR+L+ G
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYG 144
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HVV GTPGRV+DMI RR L IKL VLDEADEML++GFK+Q++D+++ L QV+LL
Sbjct: 146 HVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLL 205
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2
Query: 146 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI 57
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 118 bits (285), Expect = 3e-27
Identities = 57/83 (68%), Positives = 70/83 (84%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 442 AKCHACIGGTNVREDIRQLESGV 510
CIGGT+VR+D R+LE+G+
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGI 148
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HVVVGTPGRV DMI R AL + IK+FVLDEADEMLSRGFKDQI++VF+ + DVQV+LL
Sbjct: 149 HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLL 208
Score = 75.8 bits (178), Expect = 3e-14
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +2
Query: 119 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+P
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVP 62
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 118 bits (285), Expect = 3e-27
Identities = 57/83 (68%), Positives = 70/83 (84%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 442 AKCHACIGGTNVREDIRQLESGV 510
CIGGT+VR+D R+LE+G+
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGI 148
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HVVVGTPGRV DMI R AL + IK+FVLDEADEMLSRGFKDQI++VF+ + DVQV+LL
Sbjct: 149 HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLL 208
Score = 75.8 bits (178), Expect = 3e-14
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +2
Query: 119 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+P
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVP 62
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 77.8 bits (183), Expect = 7e-15
Identities = 31/85 (36%), Positives = 57/85 (67%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+ G+D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L H
Sbjct: 78 LTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKH 137
Query: 436 LNAKCHACIGGTNVREDIRQLESGV 510
+ K GGT++R+DI +L V
Sbjct: 138 IQLKVMVTTGGTDLRDDIMRLNGTV 162
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+V+ TPGR+ D++ + K VLDEAD++LS+ F+ + + L + QV+L
Sbjct: 163 HLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVML 221
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
F+D L +LL GI+ G+EKPS IQ+ +I
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASI 74
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG
Sbjct: 124 LEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKP 183
Query: 436 LNAKCHACIGGTNVREDIRQL 498
+ KC +GG ++ R+L
Sbjct: 184 ITLKCSVIVGGRSLIHQAREL 204
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRR----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
HVVV TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+ +S Q
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQ 268
Query: 678 VILL 689
+LL
Sbjct: 269 TLLL 272
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI + ALG
Sbjct: 124 LEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKP 183
Query: 436 LNAKCHACIGGTNVREDIRQL 498
+ KC +GG ++ R+L
Sbjct: 184 ITLKCSVIVGGRSLIHQAREL 204
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRR----ALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQ 677
HVVV TPGR+ D+I A I+ FVLDEAD ML + DQ+ +F+ +S Q
Sbjct: 209 HVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQ 268
Query: 678 VILL 689
+LL
Sbjct: 269 TLLL 272
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/60 (55%), Positives = 45/60 (75%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVILL 689
HV++GTP D ++ + IK+FVLDEADEMLS+GFKDQI++VF+ + DVQV+LL
Sbjct: 111 HVLMGTPK---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLL 167
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
G+DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+ + + +LG +LN
Sbjct: 33 GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92
Query: 442 AKCHACIGGTNVRED 486
C+G E+
Sbjct: 93 VNA-TCLGFDTTAEN 106
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +2
Query: 167 MNLKEELLRGIYAYGFEKPSAIQQRAIMPSSKDAMLSLKPSQELEKLLLSL 319
M LKEELLRGIY +GFEKPSAIQ+ A+ P + ++++ K ++SL
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 64.1 bits (149), Expect = 9e-11
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 445 KCHACIGGTNV 477
K H I G N+
Sbjct: 310 KIHYAIKGGNM 320
Score = 35.1 bits (77), Expect = 0.048
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML 662
+V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 332 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMV 383
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 64.1 bits (149), Expect = 9e-11
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 445 KCHACIGGTNV 477
K H I G N+
Sbjct: 335 KIHYAIKGGNM 345
Score = 35.1 bits (77), Expect = 0.048
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML 662
+V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 357 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMV 408
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 64.1 bits (149), Expect = 9e-11
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 445 KCHACIGGTNV 477
K H I G N+
Sbjct: 719 KIHYAIKGGNM 729
Score = 35.1 bits (77), Expect = 0.048
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR-RALHANTIKLFVLDEADEML-SRGFKDQIHDVFKML 662
+V+GTPG D + + + + + I+ VLDEAD M+ +GF D ++ M+
Sbjct: 741 IVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMV 792
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H+VV TPGR+ DM+T++ ++ + VLDEAD ML GF+D+I +F A Q +L
Sbjct: 324 HIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLL 382
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQIQK 411
+ GRD+I A +G+GKT TF + ++ Q++ + LI+ P+RELA+QI
Sbjct: 225 LSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFD 284
Query: 412 VVIALGDHL------NAKCHACIGGTNVREDIRQLESGV 510
++I + D L + CIGG + E + + G+
Sbjct: 285 LIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI 323
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGD 432
+ G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 59 MDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGR 118
Query: 433 HLNAKCHACIGGTNVRE 483
+C +GG + E
Sbjct: 119 FTGLRCACLVGGDQIEE 135
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 453 CLHWWHQCP*RYSPTGEWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 632
CL Q ++S E +++ TPGR+ +I L + ++ V DEAD + GF+
Sbjct: 126 CLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQ 185
Query: 633 DQIHDVFKMLSADVQVIL 686
DQ+ + K + Q +L
Sbjct: 186 DQLTETLKRIPESRQTLL 203
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGD 432
+ G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q KVV LG
Sbjct: 59 MDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGR 118
Query: 433 HLNAKCHACIGGTNVRE 483
+C +GG + E
Sbjct: 119 FTGLRCACLVGGDQIEE 135
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 453 CLHWWHQCP*RYSPTGEWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFK 632
CL Q ++S E +++ TPGR+ +I L + ++ V DEAD + GF+
Sbjct: 126 CLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQ 185
Query: 633 DQIHDVFKMLSADVQVIL 686
DQ+ + K + Q +L
Sbjct: 186 DQLTETLKRIPESRQTLL 203
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/74 (39%), Positives = 44/74 (59%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
+QG+DVI A++G+GKT F+I +LQ + + L+L PTRELA QI + ALG
Sbjct: 79 LQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSG 138
Query: 436 LNAKCHACIGGTNV 477
+ +GG ++
Sbjct: 139 IGLIAAVIVGGVDM 152
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMI-TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
H++V TPGR+ D + + + +K ++DEAD +L+ F+ ++ + K++ + + L
Sbjct: 164 HIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYL 223
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 420
+ GRD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V I
Sbjct: 164 MSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSI 223
Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLESGV 510
L K GG + R LE GV
Sbjct: 224 DFCHSLGLKMTCLFGGASKGPQARDLERGV 253
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+VV TPGR+ D + + VLDEAD ML GF+ QI + + D Q ++
Sbjct: 255 IVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLM 312
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 55.6 bits (128), Expect = 3e-08
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQI 405
+Q RDVI A++G+GKTA F + +L I TS+ + + A+I+APTRELAQQI
Sbjct: 336 LQNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQI 394
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLESGV 510
++ G L K + IGG + + +L GV
Sbjct: 395 EEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGV 429
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
VV+ TPGR+ D++ R L N +LDEAD ML GF+ + V + +
Sbjct: 431 VVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYM 480
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/70 (37%), Positives = 44/70 (62%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 442 AKCHACIGGT 471
A+ +GG+
Sbjct: 118 ARTSVYVGGS 127
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/56 (35%), Positives = 35/56 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV
Sbjct: 143 IVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQV 198
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/70 (37%), Positives = 44/70 (62%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++ V +
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117
Query: 442 AKCHACIGGT 471
A+ +GG+
Sbjct: 118 ARTSVYVGGS 127
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/56 (35%), Positives = 35/56 (62%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
+V+GTPGR+ ++ A++ + + FVLDEAD+++ F+D I+ + L QV
Sbjct: 143 IVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQV 198
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +
Sbjct: 76 ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKY 135
Query: 436 L-NAKCHACIGGTNVREDIRQL 498
L K GG +++D +L
Sbjct: 136 LPGVKVAVFFGGMAIKKDEERL 157
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVIL 686
H+VVGTPGR+ + L + +K FVLDE D+M+ + + ++ KM QV++
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMM 222
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +
Sbjct: 76 ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKY 135
Query: 436 L-NAKCHACIGGTNVREDIRQL 498
L K GG +++D +L
Sbjct: 136 LPGVKVAVFFGGMAIKKDEERL 157
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDVFKMLSADVQVIL 686
H+VVGTPGR+ + L + +K FVLDE D+M+ + + ++ KM QV++
Sbjct: 163 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMM 222
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K +
Sbjct: 75 ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKY 134
Query: 436 L-NAKCHACIGGTNVREDIRQL 498
L K GG +++D +L
Sbjct: 135 LPGVKVAVFFGGMAIKKDEERL 156
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
H+VVGTPGR+ + L + +K FVLDE D+M+ G D DV
Sbjct: 162 HIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI--GDADMRRDV 206
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVIAL 426
+ G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+ +V L
Sbjct: 183 LTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKL 242
Query: 427 GDHLNAKCHACIGGTNVREDIRQLESG 507
+ + C GG +++ L SG
Sbjct: 243 STFIQLEVCLCAGGLDLKAQEAALRSG 269
Score = 35.5 bits (78), Expect = 0.036
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +3
Query: 552 TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+R+ ++ VLDEAD ML F+DQ++++ ++ + + Q +L
Sbjct: 310 SRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLL 354
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 53 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 226
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 227 AIQQRAI 247
IQQ I
Sbjct: 173 PIQQACI 179
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKV 414
+ + GRDVI A++G+GKT F + + + I + E A+ILAPTRELA Q K
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESG 507
L K GG + E I L+ G
Sbjct: 397 ANKFAKPLGLKVACTYGGVGISEQIADLKRG 427
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +3
Query: 513 VVVGTPGRVYDMITR---RALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVI 683
+VV TPGR+ D++ + + + VLDEAD M +GF+ QI V + D Q +
Sbjct: 430 IVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTV 489
Query: 684 L 686
L
Sbjct: 490 L 490
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +1
Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 438
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 439 NAKCHACIGGTNVREDIRQLES 504
N GG V ++I+ ++
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKN 129
Score = 34.3 bits (75), Expect = 0.083
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +3
Query: 510 HVVVGTPGRVYDMI----TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKML 662
+++V TPGR++ +I T A T++L V+DEAD F+D + ++ +
Sbjct: 133 NILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCI 187
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
CH+++ TPGR+ D++ + + + VLDEAD ML GF+ QI +
Sbjct: 302 CHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQI 349
Score = 33.5 bits (73), Expect = 0.15
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 16/64 (25%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAPTREL 393
GRD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L+PTREL
Sbjct: 203 GRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTREL 262
Query: 394 AQQI 405
+ QI
Sbjct: 263 SLQI 266
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIA 423
+ G DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A
Sbjct: 111 LTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINA 170
Query: 424 LGDHLNAKCHACIGGTNV 477
+G H C IGG++V
Sbjct: 171 VGAHHGFSCGLVIGGSDV 188
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRA-LHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+++V TPGR+ + A + +++++ VLDEAD ML GF Q++ + L A+ Q +L
Sbjct: 199 NIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLL 258
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIA 423
++G+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q V+
Sbjct: 103 LEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSE 162
Query: 424 LGDHLNAKCHACIGGTNVREDIRQLESGV 510
L + N +GG+N + +L GV
Sbjct: 163 LLEGSNLTYGLVMGGSNRSAEKDKLAKGV 191
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 513 VVVGTPGRVYDMI--TRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
++V TPGR+ D + T L N +K ++DEAD +L GF+ ++ V + L Q +L
Sbjct: 193 ILVATPGRLLDHLQNTDNFLVRN-MKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSML 251
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
H+++ TPGR+ D+I + + + VLDEAD ML GF+ QI +
Sbjct: 275 HILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 321
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 390
+ RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRE
Sbjct: 174 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 233
Query: 391 LAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESG 507
LA QI K N + GG N R+ + +L +G
Sbjct: 234 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAG 273
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
H+++ TPGR+ D+I + + + VLDEAD ML GF+ QI +
Sbjct: 259 HILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 305
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 390
+ RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRE
Sbjct: 158 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 217
Query: 391 LAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESG 507
LA QI K N + GG N R+ + +L +G
Sbjct: 218 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAG 257
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDV 650
H+++ TPGR+ D+I + + + VLDEAD ML GF+ QI +
Sbjct: 256 HILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 302
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 390
+ RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L+PTRE
Sbjct: 155 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 214
Query: 391 LAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQLESG 507
LA QI K N + GG N R+ + +L +G
Sbjct: 215 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAG 254
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 10/64 (15%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQI 405
+ G DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTRELA QI
Sbjct: 416 LDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQI 475
Query: 406 QKVV 417
+ +
Sbjct: 476 HEAL 479
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQI 641
C +++GT GR+ D + + ++ V DEAD +L KD +
Sbjct: 510 CDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPL 554
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLS--RGFKDQIHDVFKML 662
C +VVGTP RV+D+I L ++ V+DE D+ L+ QI +F++L
Sbjct: 335 CDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFLAGKNNCAHQIESIFRVL 388
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQ 333
A + G D + A++G+GKT FS+ I Q
Sbjct: 35 AILGGADALIAAETGSGKTGAFSLPIAQ 62
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 411
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 412 VVIALGDHLNAKCHACIGG 468
+ AL + +GG
Sbjct: 87 HINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 411
+DV+ A++G+GKT F I ++ ++ T +R +ALI+APTREL QI K
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 412 VVIALGDHLNAKCHACIGG 468
+ AL + +GG
Sbjct: 254 HINALISTTQLIATSIVGG 272
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ GG V + Q+E G
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 650
++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 471 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETI 517
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ GG V + Q+E G
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 650
++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 471 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETI 517
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQ 402
+ G+D I +Q+G+GKT F + L ID + + + L+L+PTRELAQQ
Sbjct: 119 LSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQ 178
Query: 403 IQKVVIALGDHLNAKCHACI-GGTNVREDIRQLESGV 510
I+ V N C+ GG + E + GV
Sbjct: 179 IEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGV 213
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
+V+ TPGR+ D+ + ++ VLDEAD ML GF+ I + + D V L
Sbjct: 215 IVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVAL 272
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ GG V + Q+E G
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 650
++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 471 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETI 517
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +3
Query: 501 EWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQV 680
E +VV TPGR+ D++ A + V DEAD M GF+ Q+ + + D Q
Sbjct: 388 EGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQC 447
Query: 681 IL 686
++
Sbjct: 448 LM 449
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQI 405
+ GRDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA Q+
Sbjct: 300 LSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HVVV TPG++ M + R + + V+DEAD +LS G+++++ + L Q ++
Sbjct: 148 HVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLM 206
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRGFKDQIHDVFKMLSADVQVIL 686
HVVV TPG++ M + R + + V+DEAD +LS G+++++ + L Q ++
Sbjct: 215 HVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLM 273
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKV 414
++ ++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI K+
Sbjct: 124 LENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKL 182
Query: 415 VIALGDHL 438
+ L L
Sbjct: 183 FVKLSQAL 190
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 116 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
P + D++ +TF D L E +L+ I G+EK + +Q+ I
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKV 414
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ GG NV + Q+ G
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 650
C ++VGT GRV A+ + + VLDEAD M+ S GF +I +
Sbjct: 426 CTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQI 474
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +1
Query: 262 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKV 414
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ GG NV + Q+ G
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKG 425
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 507 CHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 650
C ++VGT GRV A+ + + VLDEAD M+ S GF +I +
Sbjct: 426 CTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQI 474
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ GG V + Q+E G
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 650
++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 682 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTI 728
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ GG V + Q+E G
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 650
++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 682 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTI 728
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Frame = +1
Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 411
QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYN 647
Query: 412 VVIALGDHLNAKCHACIGGTNVREDIRQLESG 507
+ GG V + Q+E G
Sbjct: 648 EGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 VVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 650
++VGT GR+ + + + FVLDEAD M+ + GF I +
Sbjct: 682 IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTI 728
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQI 405
+ G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 771 MHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQT 830
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 504
L KC GG + +++ L S
Sbjct: 831 FTTARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 650
+++V T GR+ D + + + +K VLDEAD M+ S F +++ +
Sbjct: 868 NILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKI 915
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQI 405
+ G DV+A A +G+GKT F I + ++ D + + + LI+APTREL Q
Sbjct: 771 MHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQT 830
Query: 406 QKVVIALGDHLNAKCHACIGGTNVREDIRQLES 504
L KC GG + +++ L S
Sbjct: 831 FTTARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 510 HVVVGTPGRVYDMITRRALHANTIKLFVLDEADEML-SRGFKDQIHDV 650
+++V T GR+ D + + + +K VLDEAD M+ S F +++ +
Sbjct: 868 NILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKI 915
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.9 bits (79), Expect = 0.027
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQIQKVVIALGD 432
++ RDV A +G+GKT + + +L + + + QA+IL P + L QI D
Sbjct: 154 LRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWND 213
Query: 433 HLN-AKCHACIGGTNVREDIRQLES 504
AK + G + ++ RQL S
Sbjct: 214 ESGVAKVVSLSGANDFEKEARQLAS 238
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Frame = +1
Query: 265 RDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 402
R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 486 YSPTGEWCHVVVGTPGRVYDMITRRALHANTIKLFVLDEADEMLSRG-FKDQIHDVFKML 662
Y T + C + T G++ I + + + +K+ +LDE+D+M+ F + I V L
Sbjct: 216 YQFTKDQCDIAFCTMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQL 275
Query: 663 SADV 674
DV
Sbjct: 276 QEDV 279
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.3 bits (70), Expect = 0.34
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 271 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 450
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+ + + K
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 451 HA-CIGGTNVREDI 489
H + TN D+
Sbjct: 142 HEHALMDTNEYRDV 155
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 113 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 15
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 253 FIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 405
F +VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1334 FESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 271 VIAQAQSGTGKTATFSISILQQIDTSIREC 360
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 83 DPSMAHFWNPLANLLTFFQTNKT 15
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical
protein Y92H12A.5 protein.
Length = 1375
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 587 KFDGVGMKRTT--SYHIIYTTWSAHHHMTPLSSWRI 486
K GV R T S H++ W AH H++ + +W I
Sbjct: 672 KLCGVSADRLTEISQHLLICCWRAHKHVSGIFAWII 707
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 552 LSYHIHDLECPPPHDTTLQLANIFT 478
L YH H + PPP TT Q A F+
Sbjct: 884 LMYHHHQMSAPPPPTTTPQQAPQFS 908
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 26 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 166
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 234 SNAQ*CLHPRTRCYRSSPVRNWKNCYFLYIDSTTNRYKHS*MSSFD 371
+N Q + PRT +R++ +RN + Y+D ++ YK M+S+D
Sbjct: 322 NNVQEAVDPRTEVFRNAEIRNNRADGVPYMDRSSADYK---MASWD 364
>Z48584-8|CAK55179.1| 435|Caenorhabditis elegans Hypothetical
protein ZK1321.2f protein.
Length = 435
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
+ + ++ WIAEG+ KP M NN + R
Sbjct: 129 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 158
>Z48584-7|CAH04712.1| 448|Caenorhabditis elegans Hypothetical
protein ZK1321.2e protein.
Length = 448
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
+ + ++ WIAEG+ KP M NN + R
Sbjct: 142 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 171
>Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical
protein ZK1321.2d protein.
Length = 501
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
+ + ++ WIAEG+ KP M NN + R
Sbjct: 195 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 224
>Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical
protein ZK1321.2c protein.
Length = 536
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
+ + ++ WIAEG+ KP M NN + R
Sbjct: 230 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 259
>Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical
protein ZK1321.2b protein.
Length = 524
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
+ + ++ WIAEG+ KP M NN + R
Sbjct: 218 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 247
>Z48584-2|CAA88477.2| 481|Caenorhabditis elegans Hypothetical
protein ZK1321.2a protein.
Length = 481
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
+ + ++ WIAEG+ KP M NN + R
Sbjct: 175 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 204
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 382 WEPGSKLDIHECLYRFVVESI*RK 311
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 325 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 325 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.5 bits (58), Expect = 9.6
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +1
Query: 244 NNAFIQGRDVIAQAQSGTG----KTATF---SISILQQIDTSIRECQALILAPTRELAQQ 402
+NA + R + + G G TAT S+ +L++ + IRE Q +LA ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071
Query: 403 IQKVVIALGDHLNAK 447
QK + A + + K
Sbjct: 1072 -QKAIDAQEEEIQTK 1085
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.5 bits (58), Expect = 9.6
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +1
Query: 244 NNAFIQGRDVIAQAQSGTG----KTATF---SISILQQIDTSIRECQALILAPTRELAQQ 402
+NA + R + + G G TAT S+ +L++ + IRE Q +LA ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071
Query: 403 IQKVVIALGDHLNAK 447
QK + A + + K
Sbjct: 1072 -QKAIDAQEEEIQTK 1085
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 233 QQRAIMPSSKDAMLSLKPSQELEKLLLSLYRFYNKSIQAFV 355
++ A S K L L+P+ +LEK L+ +R +I+ F+
Sbjct: 359 EEEAGASSQKACALCLEPTDDLEKHLVEQHRIAESAIEKFL 399
>AC006792-2|AAF60742.3| 406|Caenorhabditis elegans Hypothetical
protein Y50C1A.2 protein.
Length = 406
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3
Query: 680 DLNIS*QHLEDIMDLVLETSGQHFISFIKNKKFDGVGMKRTTSYHI 543
D+ IS + L + D V + S ++ ++ KFD V ++ YH+
Sbjct: 66 DITISKEVLNLLYDFVRDDSKVNYDRLLEFHKFDKVALETVQKYHV 111
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 325 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
+ Q +DT +ECQ L + + E + +V+ D LNAK
Sbjct: 112 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,577,189
Number of Sequences: 27780
Number of extensions: 406239
Number of successful extensions: 1299
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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