Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20653
(696 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g23460.1 68417.m03381 beta-adaptin, putative strong similarit... 164 6e-41
At4g11380.1 68417.m01835 beta-adaptin, putative strong similarit... 164 6e-41
At5g11490.1 68418.m01341 adaptin family protein similar to SP|Q9... 94 7e-20
At3g55480.2 68416.m06162 adaptin family protein similar to AP-3 ... 40 0.002
At3g55480.1 68416.m06161 adaptin family protein similar to AP-3 ... 40 0.002
At1g31730.1 68414.m03893 epsilon-adaptin, putative similar to SP... 38 0.006
At5g22780.1 68418.m02663 adaptin family protein similar to SP|P1... 33 0.24
At5g22770.3 68418.m02661 adaptin family protein similar to SP|P1... 33 0.24
At5g22770.2 68418.m02660 adaptin family protein similar to SP|P1... 33 0.24
At5g22770.1 68418.m02659 adaptin family protein similar to SP|P1... 33 0.24
At3g07360.2 68416.m00878 armadillo/beta-catenin repeat family pr... 30 1.7
At3g07360.1 68416.m00877 armadillo/beta-catenin repeat family pr... 30 1.7
At3g43890.1 68416.m04698 DC1 domain-containing protein contains ... 29 2.9
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 29 2.9
At1g69150.1 68414.m07911 DC1 domain-containing protein contains ... 29 2.9
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 29 2.9
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 29 2.9
At4g01050.1 68417.m00142 hydroxyproline-rich glycoprotein family... 28 5.1
At1g76390.1 68414.m08877 armadillo/beta-catenin repeat family pr... 28 5.1
At1g76440.2 68414.m08888 expressed protein 27 9.0
At1g76440.1 68414.m08887 expressed protein 27 9.0
At1g65180.1 68414.m07390 DC1 domain-containing protein contains ... 27 9.0
>At4g23460.1 68417.m03381 beta-adaptin, putative strong similarity
to SP|Q10567 Adapter-related protein complex 1 beta 1
subunit (Beta-adaptin 1) [Homo sapiens], beta-adaptin
[Drosophila melanogaster] GI:434902; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 893
Score = 164 bits (398), Expect = 6e-41
Identities = 76/90 (84%), Positives = 84/90 (93%)
Frame = +3
Query: 255 TVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNPL 434
TVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +D NPL
Sbjct: 44 TVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPL 103
Query: 435 IRALAVRTMGCIRVDKITEYLCEPLESA*K 524
IRALAVRTMGCIRVDKITEYLC+PL+ K
Sbjct: 104 IRALAVRTMGCIRVDKITEYLCDPLQKCLK 133
Score = 107 bits (258), Expect = 5e-24
Identities = 47/62 (75%), Positives = 60/62 (96%)
Frame = +2
Query: 506 IRKCLKDEDPYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKDLLSDSNPMVVANAVAALS 685
++KCLKD+DPYVRKTAA+CVAKL+DI++ +VED+GFL+ LKDL+SD+NPMVVANAVAAL+
Sbjct: 128 LQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDLISDNNPMVVANAVAALA 187
Query: 686 EI 691
EI
Sbjct: 188 EI 189
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1
Query: 139 DSKYFTTTKKGEIFELKSELNSDXXXXXXXXXXXXIASIQLEK 267
DSKYF+TTKKGEI ELK ELNS IA++ + K
Sbjct: 5 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGK 47
>At4g11380.1 68417.m01835 beta-adaptin, putative strong similarity
to SP|Q10567 Adapter-related protein complex 1 beta 1
subunit (Beta-adaptin 1) [Homo sapiens], beta-adaptin
[Drosophila melanogaster] GI:434902; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 894
Score = 164 bits (398), Expect = 6e-41
Identities = 76/90 (84%), Positives = 84/90 (93%)
Frame = +3
Query: 255 TVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNPL 434
TVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +D NPL
Sbjct: 44 TVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPL 103
Query: 435 IRALAVRTMGCIRVDKITEYLCEPLESA*K 524
IRALAVRTMGCIRVDKITEYLC+PL+ K
Sbjct: 104 IRALAVRTMGCIRVDKITEYLCDPLQKCLK 133
Score = 107 bits (258), Expect = 5e-24
Identities = 47/62 (75%), Positives = 60/62 (96%)
Frame = +2
Query: 506 IRKCLKDEDPYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKDLLSDSNPMVVANAVAALS 685
++KCLKD+DPYVRKTAA+CVAKL+DI++ +VED+GFL+ LKDL+SD+NPMVVANAVAAL+
Sbjct: 128 LQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDLISDNNPMVVANAVAALA 187
Query: 686 EI 691
EI
Sbjct: 188 EI 189
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1
Query: 139 DSKYFTTTKKGEIFELKSELNSDXXXXXXXXXXXXIASIQLEK 267
DSKYF+TTKKGEI ELK ELNS IA++ + K
Sbjct: 5 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGK 47
>At5g11490.1 68418.m01341 adaptin family protein similar to
SP|Q9WV76 Adapter-related protein complex 4 beta 1
subunit (Beta subunit of AP- 4) {Mus musculus},
beta-adaptin Drosophila 1 {Drosophila melanogaster}
GI:434902; contains Pfam profile: PF01602 Adaptin N
terminal region
Length = 841
Score = 94.3 bits (224), Expect = 7e-20
Identities = 42/96 (43%), Positives = 65/96 (67%)
Frame = +3
Query: 237 KGYSIHTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDC 416
K S T+G DVS++F ++V C T ++ LKK+ YLY+ NYAK PD++++ +N +DC
Sbjct: 50 KVISYMTIGIDVSSVFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPDLSLLTINFLQRDC 109
Query: 417 EDSNPLIRALAVRTMGCIRVDKITEYLCEPLESA*K 524
+D +P+IR LA+R++ +RV + EYL PL S K
Sbjct: 110 KDEDPMIRGLALRSLCSLRVPNLVEYLVGPLGSGLK 145
Score = 48.4 bits (110), Expect = 4e-06
Identities = 30/59 (50%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 518 LKDEDPYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKDL-LSDSNPMVVANAVAALSEI 691
LKD + YVR A V KLY IS S D F LK L L DS+ VVAN ++AL EI
Sbjct: 144 LKDNNSYVRTIAVTGVLKLYHISPSTCIDADFPATLKSLMLHDSDAQVVANCLSALQEI 202
>At3g55480.2 68416.m06162 adaptin family protein similar to AP-3
complex beta3A subunit, Homo sapiens, SP|O00203;
contains Pfam profile: PF01602 Adaptin N terminal region
Length = 987
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 491 ISMRTIRKCLKDEDPYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKD-LLSDSNPMVVAN 667
+++ + KC +D YVR+ AA + KL+D+ + E +++L LL+D +P VV
Sbjct: 12 LALAAVSKCARDPAVYVRRCAANALPKLHDL--RLEEHASAIEELVGILLNDHSPGVVGA 69
Query: 668 AVAALSEI 691
A AA + I
Sbjct: 70 AAAAFTSI 77
>At3g55480.1 68416.m06161 adaptin family protein similar to AP-3
complex beta3A subunit, Homo sapiens, SP|O00203;
contains Pfam profile: PF01602 Adaptin N terminal region
Length = 987
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 491 ISMRTIRKCLKDEDPYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKD-LLSDSNPMVVAN 667
+++ + KC +D YVR+ AA + KL+D+ + E +++L LL+D +P VV
Sbjct: 12 LALAAVSKCARDPAVYVRRCAANALPKLHDL--RLEEHASAIEELVGILLNDHSPGVVGA 69
Query: 668 AVAALSEI 691
A AA + I
Sbjct: 70 AAAAFTSI 77
>At1g31730.1 68414.m03893 epsilon-adaptin, putative similar to
SP|Q9UPM8 Adapter-related protein complex 4 epsilon 1
subunit (Epsilon subunit of AP-4) (AP-4 adapter complex
epsilon subunit) {Homo sapiens}; contains Pfam profile:
PF01602 Adaptin N terminal region
Length = 938
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +3
Query: 249 IHTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSN 428
I +G D S + V DNL LK+ YL + + D+ I+ VNT KD N
Sbjct: 76 IEMLGHDASFGYIYAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLRSDN 135
Query: 429 PLIRALAVRTM 461
L+ A+ +
Sbjct: 136 YLVVCAALNAI 146
>At5g22780.1 68418.m02663 adaptin family protein similar to
SP|P18484 adaptor-related protein complex 2 alpha 2
subunit (Alpha-adaptin C) (Clathrin assembly protein
complex 2 alpha-C large chain) {Rattus norvegicus};
contains Pfam profiles PF01602 Adaptin N terminal
region, PF02883 Adaptin C-terminal domain
Length = 1013
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +2
Query: 476 GQDYRISMRT-IRKCLKDED--PYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKDLLSDS 646
G+D+ S+ ++K L P VRK AA+C+ +L+ + V G+ D++ LL +
Sbjct: 134 GRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGWADRMAQLLDER 193
Query: 647 NPMVVANAVAAL 682
+ V+ ++ + L
Sbjct: 194 DLGVLTSSTSLL 205
>At5g22770.3 68418.m02661 adaptin family protein similar to
SP|P18484 adaptor-related protein complex 2 alpha 2
subunit (Alpha-adaptin C) (Clathrin assembly protein
complex 2 alpha-C large chain) {Rattus norvegicus};
contains Pfam profiles PF01602 Adaptin N terminal
region, PF02883 Adaptin C-terminal domain
Length = 1012
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +2
Query: 476 GQDYRISMRT-IRKCLKDED--PYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKDLLSDS 646
G+D+ S+ ++K L P VRK AA+C+ +L+ + V G+ D++ LL +
Sbjct: 134 GRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGWADRMAQLLDER 193
Query: 647 NPMVVANAVAAL 682
+ V+ ++ + L
Sbjct: 194 DLGVLTSSTSLL 205
>At5g22770.2 68418.m02660 adaptin family protein similar to
SP|P18484 adaptor-related protein complex 2 alpha 2
subunit (Alpha-adaptin C) (Clathrin assembly protein
complex 2 alpha-C large chain) {Rattus norvegicus};
contains Pfam profiles PF01602 Adaptin N terminal
region, PF02883 Adaptin C-terminal domain
Length = 1012
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +2
Query: 476 GQDYRISMRT-IRKCLKDED--PYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKDLLSDS 646
G+D+ S+ ++K L P VRK AA+C+ +L+ + V G+ D++ LL +
Sbjct: 134 GRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGWADRMAQLLDER 193
Query: 647 NPMVVANAVAAL 682
+ V+ ++ + L
Sbjct: 194 DLGVLTSSTSLL 205
>At5g22770.1 68418.m02659 adaptin family protein similar to
SP|P18484 adaptor-related protein complex 2 alpha 2
subunit (Alpha-adaptin C) (Clathrin assembly protein
complex 2 alpha-C large chain) {Rattus norvegicus};
contains Pfam profiles PF01602 Adaptin N terminal
region, PF02883 Adaptin C-terminal domain
Length = 1012
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +2
Query: 476 GQDYRISMRT-IRKCLKDED--PYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKDLLSDS 646
G+D+ S+ ++K L P VRK AA+C+ +L+ + V G+ D++ LL +
Sbjct: 134 GRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGWADRMAQLLDER 193
Query: 647 NPMVVANAVAAL 682
+ V+ ++ + L
Sbjct: 194 DLGVLTSSTSLL 205
>At3g07360.2 68416.m00878 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 325
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 551 AAVCVAKLYDISSSMVEDQGFLDQLKDLLSDSNPMVVANAVAAL 682
AA+ D + ++ G L L DLL + NP+ + + AA+
Sbjct: 145 AAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAI 188
>At3g07360.1 68416.m00877 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 460
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 551 AAVCVAKLYDISSSMVEDQGFLDQLKDLLSDSNPMVVANAVAAL 682
AA+ D + ++ G L L DLL + NP+ + + AA+
Sbjct: 280 AAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAI 323
>At3g43890.1 68416.m04698 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 302 HADR*LRTEKTGVLILNELCKVTARHGYHGSQYFC 406
H + LR +K+G+ I +C+ YH S Y C
Sbjct: 385 HKEHNLRLDKSGIFIEERICEACVYPIYHHSFYSC 419
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 479 QDYRISMRTIRKCLKDEDPYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKDLLSDSNPMV 658
+DY T+R + P + ++C+ L + S + + L ++ LL D NP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 659 VANAVAA 679
AN+ AA
Sbjct: 121 PANSEAA 127
>At1g69150.1 68414.m07911 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 517
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 302 HADR*LRTEKTGVLILNELCKVTARHGYHGSQYFC 406
H + LR +K+G+ I +C+ YH S Y C
Sbjct: 345 HKEHNLRLDKSGIFIEERICEACVYPIYHHSFYSC 379
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 479 QDYRISMRTIRKCLKDEDPYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKDLLSDSNPMV 658
+DY T+R + P + ++C+ L + S + + L ++ LL D NP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 659 VANAVAA 679
AN+ AA
Sbjct: 121 PANSEAA 127
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 479 QDYRISMRTIRKCLKDEDPYVRKTAAVCVAKLYDISSSMVEDQGFLDQLKDLLSDSNPMV 658
+DY T+R + P + ++C+ L + S + + L ++ LL D NP
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120
Query: 659 VANAVAA 679
AN+ AA
Sbjct: 121 PANSEAA 127
>At4g01050.1 68417.m00142 hydroxyproline-rich glycoprotein family
protein
Length = 466
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 584 SSSMVEDQGFLDQLKDLLSDSNPMVVANAVAALS 685
+SS + G ++ + + ++D NP+V+A VAAL+
Sbjct: 82 TSSSFDSDGLIEGISNFVTD-NPLVIAGGVAALA 114
>At1g76390.1 68414.m08877 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 811
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 584 SSSMVEDQGFLDQLKDLLSDSNPMVVANAVAALSEI 691
S +VE Q +D+L DLL N VV A+AALS +
Sbjct: 675 SFCLVEGQA-VDKLVDLLDHENDKVVGPALAALSTL 709
>At1g76440.2 68414.m08888 expressed protein
Length = 143
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/68 (23%), Positives = 26/68 (38%)
Frame = +2
Query: 362 KVTARHGYHGSQYFCQGL*GFQSIDSSFGCTDYGMHSSGQDYRISMRTIRKCLKDEDPYV 541
+ T H S FC G S+ G D G+ +R+S+ I K +
Sbjct: 7 QTTTTHSKVISHVFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEI 66
Query: 542 RKTAAVCV 565
++ VC+
Sbjct: 67 QREGRVCI 74
>At1g76440.1 68414.m08887 expressed protein
Length = 143
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/68 (23%), Positives = 26/68 (38%)
Frame = +2
Query: 362 KVTARHGYHGSQYFCQGL*GFQSIDSSFGCTDYGMHSSGQDYRISMRTIRKCLKDEDPYV 541
+ T H S FC G S+ G D G+ +R+S+ I K +
Sbjct: 7 QTTTTHSKVISHVFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEI 66
Query: 542 RKTAAVCV 565
++ VC+
Sbjct: 67 QREGRVCI 74
>At1g65180.1 68414.m07390 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 653
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 302 HADR*LRTEKTGVLILNELCKVTARHGYHGSQYFC 406
H + LR +K+G + CK A YH Y C
Sbjct: 372 HIEHNLRLDKSGTFVEERSCKACAYPIYHDPFYSC 406
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,859,506
Number of Sequences: 28952
Number of extensions: 267823
Number of successful extensions: 690
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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