Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20651
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 140 3e-32
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 139 7e-32
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 132 8e-30
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 109 8e-23
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 107 2e-22
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 107 2e-22
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 89 7e-17
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 89 1e-16
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 83 8e-15
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 82 1e-14
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 76 7e-13
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 75 2e-12
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 75 2e-12
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 74 4e-12
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 73 5e-12
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 71 2e-11
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 69 8e-11
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 65 2e-09
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 62 2e-08
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 62 2e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 61 3e-08
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 61 3e-08
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 60 4e-08
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 60 4e-08
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 59 9e-08
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 59 1e-07
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 56 1e-06
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 54 3e-06
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 54 4e-06
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 53 8e-06
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 53 8e-06
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 48 2e-04
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 47 4e-04
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 47 5e-04
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 46 0.001
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 43 0.006
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 43 0.008
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 43 0.008
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 42 0.011
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 42 0.015
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 41 0.025
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 40 0.078
UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1; Filob... 38 0.18
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 38 0.24
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 38 0.31
UniRef50_UPI0000DB7234 Cluster: PREDICTED: similar to R08D7.2; n... 37 0.41
UniRef50_A4AHE7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.55
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 36 0.72
UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein ... 36 1.3
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 36 1.3
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 35 1.7
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 35 2.2
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 35 2.2
UniRef50_A4HBP4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q9PTN7 Cluster: Vasotocin VT1 receptor; n=6; Euteleosto... 33 5.1
UniRef50_A0CZG7 Cluster: Chromosome undetermined scaffold_32, wh... 33 5.1
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 33 6.7
UniRef50_A5K9R7 Cluster: Selenocysteine-specific elongation fact... 33 6.7
UniRef50_Q9VFB7 Cluster: Protein TMEM1 homolog; n=3; Diptera|Rep... 33 6.7
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 33 6.7
UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3; ... 33 8.9
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_P53046 Cluster: RHO1 GDP-GTP exchange protein 1; n=3; S... 33 8.9
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 140 bits (339), Expect = 3e-32
Identities = 66/86 (76%), Positives = 73/86 (84%)
Frame = +3
Query: 255 NNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 434
NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP V +PA NTGL
Sbjct: 71 NNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGL 130
Query: 435 GPEKTSFFQALSIPTKISKGTIEIIT 512
GPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 131 GPEKTSFFQALGITTKISRGTIEILS 156
Score = 130 bits (313), Expect = 4e-29
Identities = 58/70 (82%), Positives = 67/70 (95%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTM 225
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QM+QIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 226 MRKAIKDHLE 255
MRKAI+ HLE
Sbjct: 61 MRKAIRGHLE 70
Score = 93.1 bits (221), Expect = 6e-18
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = +2
Query: 509 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 688
+DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F
Sbjct: 156 SDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRF 215
Query: 689 QAG 697
G
Sbjct: 216 LEG 218
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 139 bits (336), Expect = 7e-32
Identities = 66/86 (76%), Positives = 73/86 (84%)
Frame = +3
Query: 255 NNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 434
NNPALE+LLPHI+GNVGFVFT+ DL EVRD LL NKV A AR GAIAP V +PA NTGL
Sbjct: 71 NNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGL 130
Query: 435 GPEKTSFFQALSIPTKISKGTIEIIT 512
GPEKTSFFQAL I TKIS+GTIEI++
Sbjct: 131 GPEKTSFFQALGITTKISRGTIEILS 156
Score = 126 bits (304), Expect = 5e-28
Identities = 56/70 (80%), Positives = 66/70 (94%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTM 225
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QM+ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 226 MRKAIKDHLE 255
MRKAI+ HLE
Sbjct: 61 MRKAIRGHLE 70
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 3/66 (4%)
Frame = +2
Query: 509 NDVHILKPGDKVGASEATLLNMLN---ISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLR 679
+DV ++KPGDKVGASEATLLNMLN ISPFSYGL+++QVYD+G++++PE+LDI + L
Sbjct: 156 SDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALH 215
Query: 680 AKFQAG 697
+F G
Sbjct: 216 KRFLKG 221
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 132 bits (319), Expect = 8e-30
Identities = 59/85 (69%), Positives = 74/85 (87%)
Frame = +3
Query: 258 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 437
NP LEK+LPH+KGN+GFVFT D+V++R+ +L N+V APA+ GAIAP+ V +PA NTGLG
Sbjct: 72 NPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVDVFVPASNTGLG 131
Query: 438 PEKTSFFQALSIPTKISKGTIEIIT 512
PEKTSFFQALSI TKIS+GTIEI++
Sbjct: 132 PEKTSFFQALSIATKISRGTIEILS 156
Score = 103 bits (246), Expect = 6e-21
Identities = 44/70 (62%), Positives = 57/70 (81%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTM 225
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QM+QIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 226 MRKAIKDHLE 255
+RKA++ HLE
Sbjct: 61 IRKALRGHLE 70
Score = 87.0 bits (206), Expect = 4e-16
Identities = 39/63 (61%), Positives = 51/63 (80%)
Frame = +2
Query: 509 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 688
++VH++K G+KVGASEATLL ML I PF+YGL + QVYDSG++FAP ILDI +DL +F
Sbjct: 156 SEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYDSGSVFAPSILDITEDDLIKQF 215
Query: 689 QAG 697
+G
Sbjct: 216 MSG 218
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 109 bits (261), Expect = 8e-23
Identities = 52/92 (56%), Positives = 68/92 (73%)
Frame = +3
Query: 237 HQRPPGNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 416
H GN A+ LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP+ VV+
Sbjct: 68 HSENSGNT-AILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQ 126
Query: 417 AHNTGLGPEKTSFFQALSIPTKISKGTIEIIT 512
NTGL P +TSFFQ L+IPTKI+KGT+EIIT
Sbjct: 127 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 158
Score = 79.4 bits (187), Expect = 8e-14
Identities = 35/61 (57%), Positives = 47/61 (77%)
Frame = +2
Query: 515 VHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQA 694
V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F+PE+LD+ + L KF +
Sbjct: 160 VELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFAS 219
Query: 695 G 697
G
Sbjct: 220 G 220
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTM 225
M + KA K Y K+ QL+DEY + +V ADNVGS Q++ IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 226 MRKAIKDHLE 255
M+++++ H E
Sbjct: 61 MKRSVRIHSE 70
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 107 bits (258), Expect = 2e-22
Identities = 49/82 (59%), Positives = 65/82 (79%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 440
P LE+LLPHIKGNVGF+FT+GDL +++ KL E K +PA+ G IAP V++PA +TGL P
Sbjct: 80 PELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPNDVIVPAGDTGLDP 139
Query: 441 EKTSFFQALSIPTKISKGTIEI 506
+T+F QAL+I +KI+KG IEI
Sbjct: 140 TQTNFVQALNIASKITKGQIEI 161
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTM 225
+ +E K K Y VK+ +LL+EY + +V DNVGS Q + IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 226 MRKAIKDHLETIQP 267
+RKAIK+ ET QP
Sbjct: 68 IRKAIKNQAET-QP 80
Score = 63.3 bits (147), Expect = 6e-09
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +2
Query: 521 ILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAG 697
++K G+KVG S+A LL L I+PF YG V+ VYD+G ++ + LD+ D+ KFQ G
Sbjct: 167 LIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIVYDAKALDLTESDIVKKFQEG 225
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 107 bits (258), Expect = 2e-22
Identities = 50/85 (58%), Positives = 65/85 (76%)
Frame = +3
Query: 258 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 437
N A LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP+ VV+ NTGL
Sbjct: 75 NQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLD 134
Query: 438 PEKTSFFQALSIPTKISKGTIEIIT 512
P +TSFFQ L+IPTKI+KGT+EIIT
Sbjct: 135 PSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 79.8 bits (188), Expect = 6e-14
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +2
Query: 515 VHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQA 694
V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F PE+L++ +DL KF A
Sbjct: 161 VELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAA 220
Query: 695 G 697
G
Sbjct: 221 G 221
Score = 72.9 bits (171), Expect = 7e-12
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = +1
Query: 61 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMRKAI 240
KA K Y K+ QLL+EY + +V ADNVGS Q++ IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 241 KDHLE 255
+ H +
Sbjct: 67 RIHAD 71
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 89.4 bits (212), Expect = 7e-17
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA-PARPGAIAPLSVVIPAHNTGLG 437
P +EKLLP +K N+GFVF + DL E+R+ +L+NK + PAR G IAP+ V IP TG+
Sbjct: 73 PQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMD 132
Query: 438 PEKTSFFQALSIPTKISKGTIEI 506
P TSF ++L I TKI KG IEI
Sbjct: 133 PSHTSFLESLGISTKIVKGQIEI 155
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTM 225
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 226 MRKAIKDHLETI 261
+R A+K +L+ +
Sbjct: 61 IRTALKKNLQAV 72
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +2
Query: 488 KGYY*NHNDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 667
KG VH++K G+KV AS ATLL N++P SYG+ V+ VYD G I+ ++LDI
Sbjct: 150 KGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITD 208
Query: 668 EDLRAKFQAG 697
ED+ KF G
Sbjct: 209 EDILEKFSKG 218
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +3
Query: 258 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 437
N +EK L + GN +FT ++ + L +++VQAPAR GAIAP V++PA NTG+
Sbjct: 81 NTCIEKKL--LCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGME 138
Query: 438 PEKTSFFQALSIPTKISKGTIEIIT 512
P+ TSFFQAL+I TKI+KGT+EI++
Sbjct: 139 PKATSFFQALNIATKIAKGTVEIVS 163
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +2
Query: 509 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 688
+D +L GD+V S ATLL L+ISPF Y + V+ V+D G +F E L I +D+ K+
Sbjct: 163 SDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSI-TDDVVEKY 221
Score = 38.7 bits (86), Expect = 0.14
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 73 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMRKAIKDHL 252
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 253 E 255
E
Sbjct: 68 E 68
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 82.6 bits (195), Expect = 8e-15
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +3
Query: 267 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 446
L+ L + G VGF+FT + +++ + ENKV+ PAR GA+AP+ VVIP TG+ P
Sbjct: 93 LDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPAS 152
Query: 447 TSFFQALSIPTKISKGTIEI 506
FF AL IPTKI KG I+I
Sbjct: 153 IQFFHALQIPTKIEKGQIQI 172
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/73 (34%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQI-RISLRGSSIVLMGKNT 222
MG+++ K F KI +LL +Y + IVG NVGS+Q++ I RI + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 223 MMRKAIKDHLETI 261
+ +K + ++ +
Sbjct: 61 LFKKVLATRVQEL 73
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = +2
Query: 512 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQ 691
D +LK G KVG S+A LL L PF YG+ V YD+G+I + + + D+ AKFQ
Sbjct: 175 DFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSILNKQQVSVNLNDIVAKFQ 234
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 440
P +E L+ +KGN+G +FT DL +++D + + +APAR G++A V I A TGL P
Sbjct: 91 PHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDP 150
Query: 441 EKTSFFQALSIPTKISKGTIEI 506
++T+FFQ L+IPTKI+K IEI
Sbjct: 151 KQTAFFQNLAIPTKIAKAQIEI 172
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +2
Query: 512 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 676
D I+ G+KVG++EA LL LNI+PFSY L V V+D+G ++ P +LDI E +
Sbjct: 175 DKQIITEGEKVGSNEAALLQKLNINPFSYKLSVAHVFDNGNVYGPGVLDITSESI 229
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/70 (30%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLR-GSSIVLMGKNT 222
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 223 MMRKAIKDHL 252
+++ A++ +
Sbjct: 61 LIKAALQKRI 70
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 440
P LE L+P ++GNV +F ++ EV + E+KV A A+ G IAP V + TG+ P
Sbjct: 83 PELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPNDVHVYPGPTGMDP 142
Query: 441 EKTSFFQALSIPTKISKGTIEII 509
+TSFFQAL I TKI KG I+I+
Sbjct: 143 SQTSFFQALGIFTKIVKGQIDIV 165
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2
Query: 509 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 688
N++H++ KVG SEA LL L + PFS+GL VK VYD+G++++ E+L + + L KF
Sbjct: 166 NELHLIFKDKKVGNSEAVLLKKLGVKPFSFGLKVKNVYDNGSVYSAEVLKLTNDILLGKF 225
Query: 689 QAG 697
G
Sbjct: 226 MNG 228
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/60 (40%), Positives = 40/60 (66%)
Frame = +1
Query: 73 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMRKAIKDHL 252
K +Y+ K+ L++E P+ I A+NVGS+Q++ +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/82 (43%), Positives = 49/82 (59%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 440
P L L+PH+K + +VF + ++ K+ V APAR G +A V+IP TG+ P
Sbjct: 91 PQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDP 150
Query: 441 EKTSFFQALSIPTKISKGTIEI 506
+ +FF ALSI TKI KG IEI
Sbjct: 151 SQINFFHALSISTKIQKGQIEI 172
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +2
Query: 512 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 667
+V + G K+G SE +LL +NI PFSYG+ YD+G I E+L I P
Sbjct: 175 EVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLSISP 226
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/62 (38%), Positives = 41/62 (66%)
Frame = +1
Query: 58 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMRKA 237
DK K + + +LL +Y + +NVGS Q++QIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 238 IK 243
++
Sbjct: 67 VQ 68
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 74.5 bits (175), Expect = 2e-12
Identities = 40/80 (50%), Positives = 46/80 (57%)
Frame = -2
Query: 499 IVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 320
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 319 RVNTKPTLPLMCGNSFSRAG 260
V TKPTLPL GN+FS++G
Sbjct: 61 LVKTKPTLPLTKGNNFSKSG 80
Score = 39.1 bits (87), Expect = 0.10
Identities = 23/53 (43%), Positives = 27/53 (50%)
Frame = -1
Query: 242 LMALRIIVFFPMSTILEPRSEIRICFICCEPTLSAPTMKHFGYSSKSWMILTK 84
LMAL +VF P+ T P + IC E TLS PT YSSK + L K
Sbjct: 87 LMALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLNLAK 139
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +3
Query: 267 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 446
L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI T GP++
Sbjct: 76 LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEPMLTQSGPDQ 135
Query: 447 TSFFQALSIPTKISKGTIEII 509
F+ AL I TKI+KG IEI+
Sbjct: 136 HGFYAALGIDTKINKGKIEIV 156
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/63 (41%), Positives = 36/63 (57%)
Frame = +2
Query: 509 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 688
N V+++K GD V S ATLL L I PF Y + +YD G I+ +L+I + AK+
Sbjct: 157 NPVNLIKKGDIVTPSHATLLQRLEIDPFFYAMSALNLYDDGEIYDAAVLEIDDSVMEAKW 216
Query: 689 QAG 697
AG
Sbjct: 217 NAG 219
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 61 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMRKAI 240
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/63 (57%), Positives = 45/63 (71%)
Frame = +2
Query: 509 NDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKF 688
N+VHI+K G KVGASEATLL LNI PF+YGL K +YD+G ++P I + EDL KF
Sbjct: 155 NEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSISE---EDLINKF 211
Query: 689 QAG 697
+ G
Sbjct: 212 KQG 214
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +3
Query: 255 NNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 434
+ P L+ L ++K N +F + ++ EV+ + +V APA+ G AP V+IPA TG+
Sbjct: 70 SKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGM 129
Query: 435 GPEKTSFFQALSIPTKISKGTIEII 509
P +TSF Q L I TKI++G I+I+
Sbjct: 130 EPTQTSFLQDLKIATKINRGQIDIV 154
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +1
Query: 73 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMRKAIKDHL 252
K + K +L Y K + AD VGS Q+++IR S+RG VLMGK TM+RK I+D L
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRD-L 67
Query: 253 ETIQPSRNCCHT 288
+P + +T
Sbjct: 68 ADSKPELDALNT 79
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/86 (41%), Positives = 56/86 (65%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 440
P L + +KG+V FVF +G+ +++ + EN +A A+ G +A V + + TG+ P
Sbjct: 95 PELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTP 154
Query: 441 EKTSFFQALSIPTKISKGTIEIITMY 518
+KTS+FQAL I TKI+KG +EII+ Y
Sbjct: 155 DKTSYFQALGIATKITKGKVEIISPY 180
Score = 60.1 bits (139), Expect = 5e-08
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +2
Query: 521 ILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 676
+L GDKVG S+A LL MLNI PF Y + + Q+Y+ G I+ ++DI ED+
Sbjct: 182 VLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIYDSSLIDIGEEDI 233
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +1
Query: 46 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTM 225
M R+D K + + +L + Y + +V +NV S Q+K I+ G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 226 MRKAIKD 246
+R+AI D
Sbjct: 85 IRRAIAD 91
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 69.3 bits (162), Expect = 8e-11
Identities = 38/86 (44%), Positives = 45/86 (52%)
Frame = -1
Query: 512 RYDFNSTL*NLGRDRKSLEERGLLWTEAGVVGGNDD*QWGNGTRTSWSLDFVLQQFVTDL 333
R +FN T NLG + +SLEER L W GV G N D WGN T + WS + V D+
Sbjct: 171 RDNFNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDI 230
Query: 332 NEVSAGEHEANVALDVWQQFLEGWIV 255
+ GE E NV LD QQ W V
Sbjct: 231 LQGIVGEDETNVTLDERQQLFVVWEV 256
Score = 37.9 bits (84), Expect = 0.24
Identities = 15/50 (30%), Positives = 34/50 (68%)
Frame = -2
Query: 661 DVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVTGLQDVYI 512
D+Q+ ++ + ++ L + +T+ EWR+VQ V++ FRS++ +T + D+ +
Sbjct: 121 DIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNV 170
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/88 (37%), Positives = 49/88 (55%)
Frame = +3
Query: 255 NNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 434
N+ ++L I GNV F+FT D +++ L N + A+ G +A V + T +
Sbjct: 70 NSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTNI 129
Query: 435 GPEKTSFFQALSIPTKISKGTIEIITMY 518
P+ FQ+L+IPTKI KG IEIIT +
Sbjct: 130 SPDGIGIFQSLNIPTKILKGQIEIITNF 157
Score = 39.9 bits (89), Expect = 0.059
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 473 PYQDFKGYY*NHNDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 652
P + KG + +L+ G K+ +EATLL LNI PF + + Y++G + P +
Sbjct: 143 PTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENGKSYDPSV 202
Query: 653 LD 658
L+
Sbjct: 203 LN 204
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 63.7 bits (148), Expect = 4e-09
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +3
Query: 258 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 437
NP L+P + GNVG +FT+GDL EV +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXLN 74
Query: 438 PEKTSFFQALSIPTKISKGTIEIITMYTS*SPVTRLELLKPP-FSTC*TSLHSHMVLLLS 614
T PT S+ +I++ Y P+ + L P + C T V LL
Sbjct: 75 LAHTRASXKPISPT-FSRVSIKMTLHY---QPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
Query: 615 R 617
R
Sbjct: 131 R 131
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +3
Query: 189 WLQYRAHGKKHNDAQSHQRPPGNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQ 368
WL R + + ++ H GN P L+P + GNVG + T+GDL EV ++ + KV
Sbjct: 592 WLPKRLFSQ--HSSRLHAEKTGN-PVFLNLVPLLVGNVGLISTKGDLKEVDKEVAKYKVG 648
Query: 369 APARPGAIAPLSVVIPAHNTGL 434
APAR G ++ + V++P NTGL
Sbjct: 649 APARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/71 (43%), Positives = 42/71 (59%)
Frame = +2
Query: 485 FKGYY*NHNDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIK 664
FKG + ++ G KVGASEA +LN+L I PF Y L ++ +YD G ++ P IL I
Sbjct: 150 FKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMYDPSILAIT 209
Query: 665 PEDLRAKFQAG 697
E L KF+ G
Sbjct: 210 EEVLGEKFRTG 220
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 440
P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T + P
Sbjct: 75 PGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRTSMSP 134
Query: 441 EKTSFFQALSIPTKISKGTIEI 506
AL+I KI KGTIEI
Sbjct: 135 NDIKILHALNIQCKIFKGTIEI 156
Score = 38.3 bits (85), Expect = 0.18
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 73 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSI-VLMGKNTMMRKAIKDH 249
K +Y K+ L +Y K +V + NV + Q+ IR L VL GKN++MR+A+ D
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAV-DQ 69
Query: 250 LETIQP 267
L+ P
Sbjct: 70 LKEELP 75
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.9 bits (141), Expect = 3e-08
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +3
Query: 258 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 437
NP L+P + GNVG +FT+GDL E +++ + KV APA G +A + V++P NTGL
Sbjct: 56 NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGLN 115
Query: 438 PEKTSFFQALSIPTKISKGTIEIITMYTS*SPVTRLELLKPP-FSTC*TSLHSHMVLLL 611
T PT S+ +I++ Y P+ + L P + C T V LL
Sbjct: 116 LAHTRASIKPISPT-FSRVSIKMTLHY---QPIKEVALGNTPIIAFCDTDSPMQCVALL 170
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +3
Query: 258 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 365
N L KLLPHIK VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 702 NSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +2
Query: 551 SEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAG 697
S+ T+ + ++ G ++QVY G+IF+P+ILDIKPEDLRAKFQ G
Sbjct: 746 SKGTIEIINDVPILKSGDKIEQVY--GSIFSPDILDIKPEDLRAKFQVG 792
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 60.5 bits (140), Expect = 4e-08
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 434
P ++ ++ KG V +FT ++ L +NK+ AR G IA + VV+PA NTG+
Sbjct: 73 PGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAP 132
Query: 435 GPEKTSFFQALSIPTKISKGTIEI 506
GP T F +A IPTKI +GTI I
Sbjct: 133 GPMLTEFKEA-GIPTKIDQGTIWI 155
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 440
P LEKL+ +I G + T + ++ L +N+ APA+PGA+ P VV+PA T L P
Sbjct: 74 PELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAP 133
Query: 441 EK-TSFFQALSIPTKISKGTIEI 506
QAL IP +I KG + I
Sbjct: 134 GPIVGQMQALGIPARIEKGKVTI 156
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 488 KGYY*NHNDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 667
KG D +LK G+ + A +LN L I P GL V VY+ G ++ P++L I
Sbjct: 151 KGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDE 210
Query: 668 ED 673
++
Sbjct: 211 QE 212
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 59.3 bits (137), Expect = 9e-08
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 434
P ++K++ + G F+FT + L +NK AR G IA + V +PA NTG+
Sbjct: 59 PGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAP 118
Query: 435 GPEKTSFFQALSIPTKISKGTIEII 509
GP T F +A IPTKI +GTI I+
Sbjct: 119 GPMLTEFKEA-GIPTKIDQGTIWIL 142
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 440
P LE LL +I+G V F+FT D ++ L E+K APA+PG IAP +V+P T P
Sbjct: 85 PELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEP 144
Query: 441 EK-TSFFQALSIPTKISKGTIEI 506
S Q +P +I G + I
Sbjct: 145 GPIVSELQQAGLPAQIQDGKVVI 167
Score = 46.0 bits (104), Expect = 9e-04
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +1
Query: 49 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLR-GSSIVLMGKNT 222
G E K A WK ++ +L+DEY +V + + + Q+++IR LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 223 MMRKAIKDHLE 255
+MR A+++ L+
Sbjct: 72 LMRIALEEKLD 82
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/75 (36%), Positives = 43/75 (57%)
Frame = +3
Query: 285 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 464
++ N+G +FT +L + + + + + G IA +++I L P +T FFQA
Sbjct: 76 YLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQA 135
Query: 465 LSIPTKISKGTIEII 509
L IPT+ISK +IEII
Sbjct: 136 LGIPTRISKSSIEII 150
Score = 39.5 bits (88), Expect = 0.078
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +1
Query: 91 KIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMRKAIKDH 249
K I LL+ Y IV +N+ S+Q+ IR LRG+S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNN 63
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 54.4 bits (125), Expect = 3e-06
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 GNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 431
G PA ++ ++G VGF FT + EV + EN V+ A+PG AP +V+PA T
Sbjct: 80 GGIPA--EIAEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTN 137
Query: 432 LGPEK-TSFFQALSIPTKISKGTIEI 506
P S F L IPT++ +G I I
Sbjct: 138 ASPGPIISKFGKLKIPTRVQEGKIWI 163
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +3
Query: 267 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 446
+E L +++G VFT+ + ++ L ++K +APA+ G+IAP +V+PA +T P
Sbjct: 71 VEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGP 130
Query: 447 -TSFFQALSIPTKISKGTIEI 506
Q + IP KI KG+I +
Sbjct: 131 ILGELQQVGIPAKIDKGSIVV 151
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 52.8 bits (121), Expect = 8e-06
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 437
N +EK ++ G GF+FT + ++ +++N V+ A+PG + +++PA NTG+
Sbjct: 86 NAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGIN 142
Query: 438 PEKT-SFFQALSIPTKISKGTI 500
P S F L IPT+I G I
Sbjct: 143 PGPVLSRFSKLKIPTQIRDGKI 164
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 267 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 443
+E + H++G +FT + E+ L + K+ AR G IA +V+PA NTG+ P
Sbjct: 80 VEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGP 139
Query: 444 KTSFFQALSIPTKISKGTIEI 506
S F L IPT++ +G+I I
Sbjct: 140 MISNFNKLGIPTRVQEGSIWI 160
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 294 GNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALS 470
G+ F+FT + ++ K+ + + APA+PG +A +V+PA +TGL P S F L
Sbjct: 93 GSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLK 152
Query: 471 IPTKISKGTIEI 506
I T + GTI I
Sbjct: 153 IKTMVKGGTIHI 164
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 446
L+ L +++G VG V T + + +L +K AP G +AP +V+P +TG+ P
Sbjct: 78 LDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGP 137
Query: 447 -TSFFQALSIPTKISKGTIEII 509
Q + +I +G+I+++
Sbjct: 138 FVGELQTIGANARIQEGSIQVL 159
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 437
NP KL+ ++ V T + ++ L E+K AP + GAIAP + + + +TG+
Sbjct: 78 NPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMP 137
Query: 438 PEK-TSFFQALSIPTKISKGTIEI 506
P S +A+ IP I KG I I
Sbjct: 138 PGPFLSELKAVGIPAAIDKGKIGI 161
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +3
Query: 315 TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP--AHNTGLGPEKTSFFQALSIPTKIS 488
T ++ ++ +E+KV P + G IAP +VIP N +GP +T +AL + TK++
Sbjct: 86 TNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTE-LRALGVKTKVT 144
Query: 489 KGTIEII 509
G IEI+
Sbjct: 145 SGKIEIV 151
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/80 (26%), Positives = 44/80 (55%)
Frame = +1
Query: 1 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRI 180
L+ + RS L+++ ++ + K +I + D Y +++ + N+ S +Q+R
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 181 SLRGSSIVLMGKNTMMRKAI 240
S++G + + MGKN +MR A+
Sbjct: 69 SMKGYARIFMGKNQLMRYAL 88
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 42.7 bits (96), Expect = 0.008
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = -2
Query: 457 KKEVFSGPR--PVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMC 284
++ +F R PVL G T A P RAGA TL+ + S TS +SP V PTLP
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 283 GNSFSRAGLFP 251
G + G FP
Sbjct: 66 GTRLRKTG-FP 75
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 42.7 bits (96), Expect = 0.008
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +3
Query: 267 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--G 437
+EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA +TG+ G
Sbjct: 79 IEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAG 137
Query: 438 PEKTSFFQALSIPTKISKGTIEII 509
P S F L + TK+ G + ++
Sbjct: 138 P-ILSVFGKLKVQTKVQDGKVHVV 160
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 42.3 bits (95), Expect = 0.011
Identities = 23/57 (40%), Positives = 29/57 (50%)
Frame = +2
Query: 521 ILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQ 691
++K G+ V A L L+I P GL VK + DSG I PE L I E + FQ
Sbjct: 160 VVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVILTPETLAIDTEKVLEDFQ 216
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 41.9 bits (94), Expect = 0.015
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 521 ILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 661
+ K G+ V AT+L+ L I P GL ++ YD GTI+ PE+L +
Sbjct: 163 VCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAV 209
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 ALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPE 443
++ ++ ++ +FT ++ L + K +P + GAIAP +++ T P
Sbjct: 76 SIPEMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPG 135
Query: 444 K-TSFFQALSIPTKISKGTIEI 506
Q+ IP I G + +
Sbjct: 136 PILGELQSAGIPASIDAGKVAV 157
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 41.1 bits (92), Expect = 0.025
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 309 VFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKI 485
+FT + E+ L + K + +PG IA +VIP NTGL P S F L IPT+I
Sbjct: 92 LFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRI 151
Query: 486 SKGTIEI 506
+I I
Sbjct: 152 QGNSIVI 158
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 39.5 bits (88), Expect = 0.078
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 267 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 443
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T L P
Sbjct: 72 MNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGP 131
Query: 444 KTSFFQALSIPTKISKGTIEI 506
Q L IP+ I G + +
Sbjct: 132 VVGELQNLGIPSGIDGGKVVV 152
>UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 245
Score = 38.3 bits (85), Expect = 0.18
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +1
Query: 10 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLR 189
K RS TLS+ K +I + +D+Y C++ ++ + +K++R R
Sbjct: 3 KSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQWR 62
Query: 190 GSSIVLMGKNTMMRKAIKDHLET 258
G+ GK +M KA+ + ET
Sbjct: 63 GTGRFFFGKGKVMAKALGETPET 85
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 37.9 bits (84), Expect = 0.24
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 285 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQ 461
H +G +FT + ++ L + K + A+PG AP +VIP T P Q
Sbjct: 80 HAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQ 139
Query: 462 ALSIPTKISKGTIEI 506
+ IP I G ++I
Sbjct: 140 QVGIPAAIEGGKVKI 154
Score = 37.1 bits (82), Expect = 0.41
Identities = 17/59 (28%), Positives = 36/59 (61%)
Frame = +1
Query: 70 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMRKAIKD 246
WK + +I + ++E+ +V + + Q++QIR +LRG++ V M +NT++ A+ +
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALNE 69
Score = 35.9 bits (79), Expect = 0.96
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 521 ILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 670
++K G+ + A L L + P GL+++ Y TIF P++L I E
Sbjct: 160 VVKKGEVINKKVAEALVKLGVKPMDVGLILQAAYYRETIFTPDLLAIDEE 209
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 37.5 bits (83), Expect = 0.31
Identities = 25/78 (32%), Positives = 39/78 (50%)
Frame = +3
Query: 186 TWLQYRAHGKKHNDAQSHQRPPGNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 365
T L RA G DAQ+ L+KL ++ G+VG +FT D E++D +
Sbjct: 70 TKLTARALGTTPEDAQAD--------GLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQ 121
Query: 366 QAPARPGAIAPLSVVIPA 419
AR G++A ++ IP+
Sbjct: 122 VDFARAGSVATRTITIPS 139
>UniRef50_UPI0000DB7234 Cluster: PREDICTED: similar to R08D7.2; n=1;
Apis mellifera|Rep: PREDICTED: similar to R08D7.2 - Apis
mellifera
Length = 239
Score = 37.1 bits (82), Expect = 0.41
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -1
Query: 296 ALDVWQQFLEGWIVSRWSLMALRIIVFFPMSTILEPRSEIRIC-FICCEPTLSAPTMKHF 120
AL + +Q LE I S+W L L+ I M ++E R+ I++C ++ C L T + +
Sbjct: 25 ALTIVEQLLESKIDSQWLLSNLKYINKNHMEDVIEERAIIKLCGYVLCNNALKTITDQRY 84
Query: 119 GYSSK 105
S+K
Sbjct: 85 HISTK 89
>UniRef50_A4AHE7 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 619
Score = 36.7 bits (81), Expect = 0.55
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 562 GGFRSSNLVTGLQDVYIVMISIVPFEILVGIERAWKKEV---FSGPRPVLWAGMTTDNGA 392
G R N TG DV V ++P+ +L G+E+ W E+ ++ P +AG NGA
Sbjct: 513 GALRERNDSTGDNDVLKVYEKLLPYAVLFGLEKEWSNELSRYYTENSPDWYAGSGVFNGA 572
Query: 391 M 389
+
Sbjct: 573 V 573
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 36.3 bits (80), Expect = 0.72
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 NNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 434
++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 73 SDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGETSF 132
Query: 435 GP-EKTSFFQALSIPTKISKGTIEI 506
P Q+ IP I G + I
Sbjct: 133 SPGPMVGKLQSAGIPAAIKGGKVVI 157
>UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein
kinase; n=8; Oryza sativa|Rep: Leucine rich repeat
containing protein kinase - Oryza sativa (Rice)
Length = 1074
Score = 35.5 bits (78), Expect = 1.3
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Frame = +3
Query: 243 RPPGNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV-- 407
R GN AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 394 RTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARL 453
Query: 408 --VIPAHN--TGLGPEKTSFFQALSI 473
I HN G PEK S +L +
Sbjct: 454 ISFIADHNKLAGSLPEKMSNLSSLEL 479
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 19 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSS 198
R +L++ R+ A WK I + +YP F+ N+ + +K +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 199 IVLMGKNTMMRKAI-KDHLETIQP 267
+ GKN +M+ + + E ++P
Sbjct: 65 RFIFGKNRVMQIGLGRTKSEEVEP 88
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 35.1 bits (77), Expect = 1.7
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 270 EKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EK 446
++L ++ G + V+T + ++ L K + A+ G IAP +VIP T P
Sbjct: 82 KELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPTSFKPGPL 141
Query: 447 TSFFQALSIPTKISKGTIEI 506
FQ + IP I G + I
Sbjct: 142 VGEFQQVGIPAGIEGGKVVI 161
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 440
P L L ++KG +FT+ E+R++L + RPGA A +V I + P
Sbjct: 81 PKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGPLPKFP 140
Query: 441 EKTS-FFQALSIPTKISKGTIEI 506
+ L +P K+ +G + +
Sbjct: 141 HTMEPVLRQLGMPVKLVRGVVHL 163
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 34.7 bits (76), Expect = 2.2
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 267 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPE 443
L K +KG G +FT EV + E + AR G +A +VV+P +
Sbjct: 90 LHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFS 149
Query: 444 KTSFFQALSIPTKISKGTIEIITMY 518
+ L +PTK+ KG +IT+Y
Sbjct: 150 MEPQLRKLGLPTKLDKG---VITLY 171
>UniRef50_A4HBP4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 934
Score = 34.3 bits (75), Expect = 2.9
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Frame = +3
Query: 177 YLATWLQYRAHGKKHNDAQSHQRPPGNN--PAL--EKLLPHIKGNVGFVFTRGDLVEVRD 344
+ TWLQ+ HN Q HQ+PP + P + + +L + T +LV V
Sbjct: 149 HAVTWLQWEEIKALHNSEQPHQKPPARSMRPCILVQLVLLWFHNGQMYRLTPAELVNVES 208
Query: 345 KLLENKVQAPARPGAIAPLSVVIPAHNTGL 434
K L ++P P A + A +T L
Sbjct: 209 KTL--TARSPPPPPRTASTGPSVSAPSTSL 236
>UniRef50_Q9PTN7 Cluster: Vasotocin VT1 receptor; n=6;
Euteleostomi|Rep: Vasotocin VT1 receptor - Gallus gallus
(Chicken)
Length = 370
Score = 33.5 bits (73), Expect = 5.1
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = -1
Query: 398 WGNGTRTSWSLDFVL---QQFVTDLNEVSAGEHEANVALDVWQQFLEGWIVSRWSLMALR 228
W TSWS+ +L Q F+ E+S G E W +F++ W R + +
Sbjct: 158 WNIPICTSWSISLILSLPQVFIFSKIEISPGIFEC------WAEFIQPW-GPRAYVTWIL 210
Query: 227 IIVFFPMSTILEPRSEIRICFI 162
+++FF STIL +++IC I
Sbjct: 211 VVIFFIPSTIL-ITCQVKICKI 231
>UniRef50_A0CZG7 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1153
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +2
Query: 551 SEATLLNMLNISPF---SYGLVVKQVYDSGTIFAPEILDIKPEDLRA 682
+++ +LN +N F SYGL + + YD ++A ++L+I+P ++A
Sbjct: 265 NQSLVLNPINSKAFYLKSYGLRLTENYDEALVWADKVLEIEPNHIKA 311
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 33.1 bits (72), Expect = 6.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 100 QLLDEYPKCFIVGADNVGSQQMKQIRISLRGS--SIVLMGKNTMMRKAIKDH 249
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQH 217
>UniRef50_A5K9R7 Cluster: Selenocysteine-specific elongation factor
selB homologue, putative; n=1; Plasmodium vivax|Rep:
Selenocysteine-specific elongation factor selB
homologue, putative - Plasmodium vivax
Length = 763
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = +3
Query: 249 PGNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 395
PG P LPH G VG R + VE LL ++ PAR G A
Sbjct: 269 PGTQPPPRMQLPHRAGGVGASPPRSENVEQLISLLREVIRVPARRGQSA 317
>UniRef50_Q9VFB7 Cluster: Protein TMEM1 homolog; n=3; Diptera|Rep:
Protein TMEM1 homolog - Drosophila melanogaster (Fruit
fly)
Length = 1145
Score = 33.1 bits (72), Expect = 6.7
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = -1
Query: 359 VLQQFVTDLNEVSAGEHEANVALDVWQQFLEGWIVSRWSLMALRII------VFFPMSTI 198
+L FVT+ N+V + A+D+W + L + VS W ++ + + F P +T+
Sbjct: 74 ILHIFVTECNDVDTYKATIREAIDIWLKTLTSYGVSDWMILLVETLDMRKTKNFMPRTTV 133
Query: 197 LE 192
L+
Sbjct: 134 LD 135
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 521 ILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEIL 655
+ KPGD + A LL L I P G+ VK D G + ++L
Sbjct: 168 VAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGVLITEDLL 212
>UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 1522
Score = 32.7 bits (71), Expect = 8.9
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +1
Query: 118 PKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMRKAIKDHLETIQPSRNCCHTSRA 297
P A S + Q + RG S+ +MGK +MR+A + PS TSR
Sbjct: 315 PSTDSTAAPGTSSSSVAQASLKSRGRSLSVMGKKKVMRRASTGTATSRPPS---AATSRR 371
Query: 298 TLASCSPA 321
SCS A
Sbjct: 372 PSVSCSAA 379
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 32.7 bits (71), Expect = 8.9
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +1
Query: 19 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSS 198
R+ +L+R ++ K K+N K+ EYP +I+G ++ + +K++R +GS
Sbjct: 6 RAKVVSLTRTDKKTKED-KANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKGSK 64
Query: 199 IVLMGKNTMMRKAI 240
I GK ++ A+
Sbjct: 65 I-FFGKLKVLALAL 77
>UniRef50_P53046 Cluster: RHO1 GDP-GTP exchange protein 1; n=3;
Saccharomyces cerevisiae|Rep: RHO1 GDP-GTP exchange
protein 1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 1155
Score = 32.7 bits (71), Expect = 8.9
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +1
Query: 226 MRKAIKDHLETIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPLPHCQ 405
+R ++ + E S H S+++ + + +S SV N RTK+++ V VPL HC
Sbjct: 337 VRDSVLEIYELSSESIFMAHQSQSSTSIANTFSSSSSSV-NSLRTKTEIYGVFVPLTHCY 395
Query: 406 SS 411
SS
Sbjct: 396 SS 397
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,537,615
Number of Sequences: 1657284
Number of extensions: 17005319
Number of successful extensions: 50673
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 48468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50657
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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