Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20651
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 112 3e-25
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 112 3e-25
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 112 3e-25
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 36 0.041
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 35 0.071
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 34 0.12
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 31 0.67
02_05_0958 + 33073302-33073442,33073839-33073913,33074382-330744... 30 2.0
06_01_0080 + 644021-645463 29 2.7
03_04_0243 + 19298293-19299117 29 3.5
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065... 29 3.5
02_03_0199 + 16263549-16263644,16264941-16265899,16267140-162677... 29 3.5
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 29 4.7
04_04_1404 + 33302080-33303341,33303435-33305307 28 6.2
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 28 8.2
07_03_0425 - 18070607-18070712,18071771-18072744 28 8.2
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 28 8.2
02_05_0833 + 32080845-32081118,32081483-32081663,32081825-320819... 28 8.2
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 112 bits (269), Expect = 3e-25
Identities = 54/92 (58%), Positives = 69/92 (75%)
Frame = +3
Query: 237 HQRPPGNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 416
H GN LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKDFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 417 AHNTGLGPEKTSFFQALSIPTKISKGTIEIIT 512
NTGL P +TSFFQ L+IPTKI+KGT+EIIT
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +2
Query: 515 VHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQA 694
V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+ EDL KF +
Sbjct: 161 VELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFAS 220
Query: 695 G 697
G
Sbjct: 221 G 221
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +1
Query: 52 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMR 231
+ KA K Y K+ QLLDEY K I ADNVGS Q+++IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 232 KAIKDHLE 255
+ IK H +
Sbjct: 64 RCIKVHAD 71
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 112 bits (269), Expect = 3e-25
Identities = 54/92 (58%), Positives = 69/92 (75%)
Frame = +3
Query: 237 HQRPPGNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 416
H GN LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKDFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 417 AHNTGLGPEKTSFFQALSIPTKISKGTIEIIT 512
NTGL P +TSFFQ L+IPTKI+KGT+EIIT
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = +2
Query: 515 VHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQA 694
V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+ EDL KF +
Sbjct: 161 VELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFAS 220
Query: 695 G 697
G
Sbjct: 221 G 221
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +1
Query: 52 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMR 231
+ KA K Y K+ QLLDEY K I ADNVGS Q+++IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 232 KAIKDHLE 255
+ IK H +
Sbjct: 64 RCIKVHAD 71
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 112 bits (269), Expect = 3e-25
Identities = 54/92 (58%), Positives = 69/92 (75%)
Frame = +3
Query: 237 HQRPPGNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 416
H GN LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKEFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 417 AHNTGLGPEKTSFFQALSIPTKISKGTIEIIT 512
NTGL P +TSFFQ L+IPTKI+KGT+EIIT
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 81.4 bits (192), Expect = 6e-16
Identities = 35/61 (57%), Positives = 47/61 (77%)
Frame = +2
Query: 515 VHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQA 694
V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+ +DL KF +
Sbjct: 161 VELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFAS 220
Query: 695 G 697
G
Sbjct: 221 G 221
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +1
Query: 52 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSSIVLMGKNTMMR 231
+ KA K Y K+ QLLDEY K I ADNVGS Q+++IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 232 KAIKDHLE 255
+ IK H +
Sbjct: 64 RCIKVHAD 71
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 35.5 bits (78), Expect = 0.041
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Frame = +3
Query: 243 RPPGNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV-- 407
R GN AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 394 RTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARL 453
Query: 408 --VIPAHN--TGLGPEKTSFFQALSI 473
I HN G PEK S +L +
Sbjct: 454 ISFIADHNKLAGSLPEKMSNLSSLEL 479
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 34.7 bits (76), Expect = 0.071
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 10 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLR 189
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q++K +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 190 GSS-IVLMGKNTM 225
SS I L GK M
Sbjct: 63 SSSRIFLAGKKVM 75
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 22 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMKQIRISLRGSS- 198
S TLS+ ++ K I ++ Y ++ DN+ +Q++K +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 199 IVLMGKNTM 225
I L GK M
Sbjct: 203 IFLAGKKVM 211
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.5 bits (68), Expect = 0.67
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +3
Query: 261 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 419
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>02_05_0958 +
33073302-33073442,33073839-33073913,33074382-33074497,
33076863-33076977,33077100-33077228,33078907-33078954,
33079343-33079469,33079634-33079789,33080031-33080287,
33080431-33080580,33080660-33080714,33080793-33081088,
33081252-33081335,33081869-33081941,33082164-33082291,
33082905-33083090,33083179-33083316,33083394-33083519,
33083705-33083965
Length = 886
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 219 HNDAQSHQRPPGNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAI 392
H++ + Q P N +K L I VGF+F LVE + L E ++Q P G I
Sbjct: 737 HSNESTSQSPAYNAKLHQKSLEVIP--VGFIFEDDTLVEPANSLAEPQLQQPLDNGLI 792
>06_01_0080 + 644021-645463
Length = 480
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 485 NLGRDRKSLEERGLLWTEAGVVGGND 408
N R K++EERGLL+ GV GG +
Sbjct: 110 NTERREKAMEERGLLYLGMGVSGGEE 135
>03_04_0243 + 19298293-19299117
Length = 274
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = -2
Query: 412 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLFP 251
+ TD+ + APG A A + S SRTS +P ++ PT P +S + + + P
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLTCSRVAP 223
>03_03_0258 -
15905847-15905990,15906088-15906244,15906374-15906504,
15906991-15907126,15907193-15907464,15907874-15908169,
15908279-15908646,15908922-15908987,15909064-15909129,
15909226-15909297,15909391-15909459,15909549-15909620,
15909708-15909776,15909874-15909945,15910046-15910178,
15911223-15911361
Length = 753
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 630 PESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 508
PE LT RP +G+ FN LR ++ +PT G + S+
Sbjct: 358 PEKNEPLTLRPIASGK-FNQLRTISIISPTAKEGLQKTVSM 397
>02_03_0199 + 16263549-16263644,16264941-16265899,16267140-16267791,
16267895-16267981,16268253-16268381,16269990-16270036,
16271337-16271438,16272720-16272843,16272981-16273028,
16273934-16274026,16274325-16274408,16274536-16274619,
16274751-16274819,16275531-16275590,16275946-16276017,
16276957-16277064,16278162-16278238,16278391-16278474,
16278617-16278728,16278778-16278810,16278811-16278900,
16279012-16279077,16279163-16279258,16279446-16279497,
16279723-16279775,16279998-16280018
Length = 1165
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -1
Query: 341 TDLNEVSAGEHEANVAL-DVWQQFLEGW-IVSRWSLMALRIIVFFPMSTILEPR--SEIR 174
T+L+ VSAG E L D W++F + SR + + ++ +IL P ++ R
Sbjct: 901 TELDNVSAGSTEWKGLLKDFWERFNKYCGNASRLQVRKVERMLEEKFGSILFPDLDNDSR 960
Query: 173 ICFICCEPTLSAPTMKH 123
IC C E TL KH
Sbjct: 961 ICPSCSEGTLRLKVSKH 977
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +2
Query: 521 ILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 652
+++P D VG S +++ +++ P+S VV+ +Y+S + A +I
Sbjct: 353 LIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395
>04_04_1404 + 33302080-33303341,33303435-33305307
Length = 1044
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 239 SKTTWKQSSPRETVATHQGQRW 304
++ W+ + P + + THQG RW
Sbjct: 233 ARCAWEYTGPEDYMRTHQGARW 254
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 27.9 bits (59), Expect = 8.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 239 SKTTWKQSSPRETVATHQGQRW 304
S+ W+ + P + + TH G+RW
Sbjct: 126 SRGAWEYTGPNDPMRTHVGERW 147
>07_03_0425 - 18070607-18070712,18071771-18072744
Length = 359
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 138 CR*RGLATDEADPYLATWLQYRAHGKKHNDAQSHQRPPGNNPALEKLLPHIK 293
CR G + DP L T + AH +K + PAL + PH++
Sbjct: 203 CRGGGGGDSQNDPMLQTVNEVTAHSRKARALVLNTSASMEGPALAHIAPHMR 254
>07_03_0196 +
14995224-14995489,14995859-14995877,14996703-14996839,
14998365-14998457,15001597-15001932,15003035-15003503
Length = 439
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -1
Query: 389 GTRTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGW 261
G +WS F +LN +S H+ V L+ W + W
Sbjct: 197 GNAENWSSQGDKDDFYNELNTISEARHKNLVKLEGWCCHINAW 239
>02_05_0833 +
32080845-32081118,32081483-32081663,32081825-32081999,
32082088-32082220,32082303-32082373,32082738-32082821,
32083106-32083196,32083315-32083835,32083932-32084096,
32084181-32084399,32084859-32084986,32085104-32085293,
32085478-32085561,32085643-32085740,32086127-32086391,
32086511-32086673,32086792-32086972,32087299-32087370,
32087473-32087614
Length = 1078
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2
Query: 280 NSFSRAGLFPGGL*WLCASLCFFP*ARYWSHVA 182
+S SRAGL PGG L A+ RYW H A
Sbjct: 39 SSHSRAGL-PGGARLLAAAAPLHCAGRYWPHAA 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,650,708
Number of Sequences: 37544
Number of extensions: 487596
Number of successful extensions: 1351
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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