Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20651
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    26   1.3  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    25   2.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   5.3  
AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          23   9.2  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          23   9.2  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          23   9.2  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 150 GLATDEADPYLATWLQYRAHGKKHNDAQSHQRPPGNNP 263
           G ATD  +  LA   Q + H  +H   Q HQ+   ++P
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQPQQQHQQQYHSHP 330


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 351 TVCHGPQRGLRG*TRSQRCP*CVATVSRGLDCFQVVFDGFAH 226
           T+C G   G+    ++Q C  C A V  GL+C Q   + FA+
Sbjct: 12  TLC-GEVTGVSYRGQAQTCRNCAAPVHHGLNCVQNRQNRFAN 52


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 249 PGNNPALEKLLPHIKGNVGFVFTRGD 326
           PG +    K  P +KGNVG+   +GD
Sbjct: 723 PGRHGQTVKGEPGLKGNVGYSGDKGD 748


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -2

Query: 532  GLQDVYIVMISIVPF-EILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLF 356
            GL+++ +  ++   F + + GI+ A  K ++   R   +      N ++  GR G  ++F
Sbjct: 2287 GLEELKLAPLTYHTFHKEIKGIDEAKSKNIWDALREKSFLTTDCTNPSLCHGREGTKSIF 2346

Query: 355  SN 350
            S+
Sbjct: 2347 SD 2348


>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 609 LSRYMILELFLHLKFWTSNQKISVPSSKLE 698
           L RY++L  FL++ F+TS  +   PS  ++
Sbjct: 4   LRRYILL--FLNICFYTSGAEAKAPSRPVQ 31


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 609 LSRYMILELFLHLKFWTSNQKISVPSSKLE 698
           L RY++L  FL++ F+TS  +   PS  ++
Sbjct: 4   LRRYILL--FLNICFYTSGAEAKAPSRPVQ 31


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 609 LSRYMILELFLHLKFWTSNQKISVPSSKLE 698
           L RY++L  FL++ F+TS  +   PS  ++
Sbjct: 4   LRRYILL--FLNICFYTSGAEAKAPSRPVQ 31


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,271
Number of Sequences: 2352
Number of extensions: 16630
Number of successful extensions: 48
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)