Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20650
(528 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 44 8e-05
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11) 40 0.001
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 39 0.002
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 39 0.002
SB_27078| Best HMM Match : Kazal_2 (HMM E-Value=7.6e-07) 38 0.007
SB_3798| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 37 0.009
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 36 0.016
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 36 0.021
SB_11598| Best HMM Match : Kazal_2 (HMM E-Value=2.1e-05) 36 0.021
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.036
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 35 0.036
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 35 0.036
SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26) 34 0.063
SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 33 0.11
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 33 0.11
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.11
SB_15403| Best HMM Match : CH (HMM E-Value=0) 32 0.25
SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) 32 0.34
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 31 0.44
SB_29074| Best HMM Match : Kazal_2 (HMM E-Value=3.3e-16) 31 0.78
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 31 0.78
SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16) 31 0.78
SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21) 30 1.0
SB_23052| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_40279| Best HMM Match : zf-MYM (HMM E-Value=0.66) 30 1.4
SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12) 29 2.4
SB_37368| Best HMM Match : Kazal_1 (HMM E-Value=9.2e-09) 29 2.4
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 29 2.4
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 4.1
SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20) 28 4.1
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_14642| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSC 483
CP C PA + VCA+DG YPS+C M + C G+ + A +GSC
Sbjct: 3002 CPPGCPPAEVSQRVCASDGLTYPSVCEMHRTACSLGISIQAKYRGSC 3048
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKG-VRLAPDQGSCSRAQGSKC 507
CP+IC L +PVCA+D YP+ C M++ C V +G C C
Sbjct: 1580 CPKICPITL--DPVCASDNNTYPNECAMKQLACQSAKVLTFRRKGDCDPCNDFDC 1632
Score = 36.3 bits (80), Expect = 0.016
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
CP C P L PVC +DG Y S C M +K C
Sbjct: 2625 CPPACKPTLT--PVCGSDGVTYESECGMIQKAC 2655
Score = 35.9 bits (79), Expect = 0.021
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLA-PDQGSCSRAQGSKCAT 513
+CP C + +PVC TD Y + C MR++ C +A +G C + C +
Sbjct: 1134 ACPENCSSTV--DPVCGTDNNTYDNECLMRQQACVANATVAVRRKGHCDPCKDVNCTS 1189
Score = 35.1 bits (77), Expect = 0.036
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
SCP C + +P+CA+DG Y + C M+K+ C
Sbjct: 2153 SCPDDC--TNETKPICASDGQTYDNECLMQKRAC 2184
Score = 33.9 bits (74), Expect = 0.083
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLA-PDQGSCSRAQGSKC 507
+CP C + +PVC +D Y + C MR++ C +A +G C C
Sbjct: 1205 ACPENCSSTV--DPVCGSDNNTYDNECLMRQQACVANTTVAVRRKGDCDPCSNVTC 1258
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLA 465
SCP CG +P+C ++ Y + C +R +C +A
Sbjct: 288 SCPSSCGDESLPQPICGSNNKTYANECELRMDSCKNNKSIA 328
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 319 TSEAARDAS---CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLA-PDQGSCS 486
T EA D + CP+ C ++ VC +DG Y + C +R C LA ++G+C
Sbjct: 1638 TCEAKDDKAVCVCPK-CPKIVK--QVCGSDGKTYDNECVLRMAACESNRTLAVRNEGNCG 1694
Query: 487 RAQGSKC 507
+G C
Sbjct: 1695 LCEGFSC 1701
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 379 EPVCATDGYIYPSLCXMRKKTC--GKGVRLAPDQGSCSRAQGSKCAT 513
+PVC +D YP+ C MR++ C K + +A Q C C T
Sbjct: 617 DPVCGSDSKTYPNECRMRQEACWNNKWIIVA-QQEECDPCNKYNCIT 662
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSRAQGSKCAT 513
C C L+ PVC +D Y + C M+ + C + A G C + C+T
Sbjct: 1373 CSEDCPKTLK--PVCGSDNNDYDNECLMQARACATNKTITAHRNGYCDPCKNHSCST 1427
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 382 PVCATDGYIYPSLCXMRKKTC 444
PVC DG +P+ C MR+ C
Sbjct: 1006 PVCTNDGKKFPNECQMRQDAC 1026
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
CP+ C P E VC T+ Y + C MRK+ C
Sbjct: 1790 CPKDC-PKEDAE-VCGTNWKTYTNECMMRKQAC 1820
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 385 VCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSRAQGSKCATA 516
VC TD Y + C M+ + C L +G C + C++A
Sbjct: 1520 VCGTDNITYSNECLMKYQACRTNSALKVKRKGDCDVCKDFDCSSA 1564
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 325 EAARDASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLA-PDQGSC 483
E SCP C P+ G+PVC +DG Y S C +RK+ C ++L +G C
Sbjct: 1675 EGGIKCSCPIYCPPS--GQPVCGSDGKSYGSECELRKEACEAKIKLTLVSKGKC 1726
Score = 35.1 bits (77), Expect = 0.036
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLA-PDQGSC 483
CP C L+ PVC DG Y S C +++ C KGV +A +G C
Sbjct: 1753 CPE-CR-TLKYTPVCGDDGKSYLSTCMLKRLACLKGVHIAIASKGRC 1797
Score = 34.7 bits (76), Expect = 0.048
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC--GKGVRLAPDQGSCSRAQGSKC 507
+CPR PVC +D Y +LC ++ + C G+ V + QG+C SKC
Sbjct: 435 ACPRFEDCPRDFRPVCGSDLRTYVNLCRLQVEVCQTGRAVTVL-RQGACDPCSVSKC 490
Score = 34.3 bits (75), Expect = 0.063
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCG--KGVRL--APDQGSCSR---AQGSK 504
CP+ PVC TD YPS C M+ C K VR+ A + G C G
Sbjct: 361 CPKPEECPYVNAPVCGTDDRTYPSECIMKTSACADKKAVRVKHAGECGPCGTLVCTNGKN 420
Query: 505 CATA 516
C T+
Sbjct: 421 CVTS 424
Score = 34.3 bits (75), Expect = 0.063
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 322 SEAARDASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSRAQG 498
S + CP + G VCA+DG Y S C ++ + CG+ +L +G C +
Sbjct: 1062 SNGKAECVCPTV-DQCPSGSTVCASDGKTYASECHVKVRNCGRYPKLRVIFEGECGQI-A 1119
Query: 499 SKCAT 513
C+T
Sbjct: 1120 DPCST 1124
Score = 33.9 bits (74), Expect = 0.083
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 322 SEAARDASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKG 453
S A CP C P+ +PVC DG Y +LC + ++ C G
Sbjct: 571 SSANASCICPTNC-PS-DWDPVCGDDGVTYQNLCHLLREACTSG 612
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSRAQGSKC 507
CP + A + VCA+D Y S C MR + C L +G C+ KC
Sbjct: 1217 CPTLQECAARKGAVCASDMKTYQSECHMRVEACRANKALQVVRRGQCANCASVKC 1271
Score = 31.9 bits (69), Expect = 0.34
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 379 EPVCATDGYIYPSLCXMRKKTCGKGVRLAPDQGSC 483
+PVCA+DG Y + C +K C K L G C
Sbjct: 624 DPVCASDGRTYQNECLAKKYACEKKRDLTFTLGKC 658
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 382 PVCATDGYIYPSLCXMRKKTCGK--GVRLAPDQGSCSRAQGSKC 507
PVCA+DG Y + C MR C + V D G+C Q C
Sbjct: 896 PVCASDGRTYVNECVMRALACSRKESVNKTKD-GACDPCQLVSC 938
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSR 489
+CP C L +C +DG Y S C MR C + + G+C R
Sbjct: 1609 TCPERC--PLTYNLICGSDGVSYLSACAMRATACQQNRNITVAHHGACER 1656
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 322 SEAARDASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC--GKGVRLAPDQGSCSRAQ 495
++ + CP P + PVC +DG Y + C +R ++C + VR+ + C+
Sbjct: 500 ADGSTTCQCPTDRCPK-EASPVCGSDGKTYENECKLRVESCKANQNVRII-SRTKCNACT 557
Query: 496 GSKC 507
S C
Sbjct: 558 LSTC 561
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSC 483
+CP + +PVC TD Y + C + C + L ++G C
Sbjct: 810 TCPDVASCDKMPDPVCGTDNKEYANECLLNVAACAANIHLRVLNKGPC 857
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 346 CPRI--CGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLA-PDQGSC 483
CPR C + EPVC +DG Y S C + +C +++ + G C
Sbjct: 1288 CPRSQECSDVI--EPVCGSDGKDYRSRCFLEVTSCALKIKITLKNNGLC 1334
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 379 EPVCATDGYIYPSLCXMRKKTCGKG-VRLAPDQGSCSRAQGSKCATAAR 522
+PVC+T G + + C M + C + + +G C +C + +R
Sbjct: 84 DPVCSTTGETFITKCHMEVEACTESRSMMVARRGECGPCASLRCKSPSR 132
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 316 PTSEAARDASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
P ++ C C P Q VC +D Y S C ++ K+C
Sbjct: 1421 PQADGTGVCICLDQCPPDNQNASVCGSDLVTYRSECELKAKSC 1463
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSRAQGSKC 507
CPR+ + PVC +D Y + C M C K + +G C+ + ++C
Sbjct: 1144 CPRLEDCSDLNTPVCGSDKVSYRNKCYMIALNCPKNKYVYVKHEGYCAPCRLAEC 1198
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
C + C L EP+CA++G +P+ C + C
Sbjct: 1361 CTKSC--PLSYEPLCASNGKTFPNQCALDMAAC 1391
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 379 EPVCATDGYIYPSLCXMRKKTCGKG-VRLAPDQGSCSRAQGSKC 507
+PVC+T G + + C M + C + + +G C KC
Sbjct: 155 DPVCSTTGETFITKCHMEVEACTESRSMMVARRGECDPCSRVKC 198
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 346 CPRICGPALQGEPVCA-TDGYIYPSLCXMRKKTCGKGVRLAPDQGSCSRAQGSKC 507
CPR+C +GEPVC T+G Y S C +RK C GV++ G C S C
Sbjct: 1090 CPRMCKD--KGEPVCGLTNGKEYKSRCHLRKYECKIGVKIDHVPGPCKLELDSPC 1142
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 40.7 bits (91), Expect = 7e-04
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 346 CPRICGPALQG-EPVCATDGYIYPSLCXMRKKTCGKGVRLAPD-QGSC 483
CP+ C PA G E +C TDG YPS C M C G R+A + +G C
Sbjct: 52 CPQGC-PAPNGDETICGTDGISYPSPCEMNLTACVLGDRIAVEYKGRC 98
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 349 PRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSRAQ 495
PR C PVCA+DG YP++C M C K + L G+C R +
Sbjct: 1814 PRPC--TADYSPVCASDGQTYPNVCTMDSAGCQKSMNLKVVRNGTCVRKE 1861
Score = 36.3 bits (80), Expect = 0.016
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 349 PRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
P IC P + PVC +DG IY C +RK C
Sbjct: 1756 PSICSPVIS--PVCGSDGKIYKDDCELRKTAC 1785
Score = 36.3 bits (80), Expect = 0.016
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 370 LQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCS-RAQGSKCATAA 519
L+ PVCA+DG IYP+ M C K + L A Q C RA+G T A
Sbjct: 1975 LEYRPVCASDGKIYPNRMTMENAGCEKNMVLRAVSQDQCEIRAEGVMGLTRA 2026
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLAP 468
CP IC L PVC +DG +Y + C MR C + + P
Sbjct: 1367 CPSIC--PLHYSPVCGSDGNMYSNECAMRAAACKQQKMITP 1405
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 325 EAARDASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGK 450
+ + CP C + PVC TDG Y + C MR C K
Sbjct: 1288 DGSTSCKCPIFC--TYEYMPVCGTDGKTYGNKCEMRASACLK 1327
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 382 PVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSRA 492
PVCA+DG YP+ M C K + L QG C +A
Sbjct: 1533 PVCASDGKTYPNRMSMENAGCEKNMILRIVSQGECPKA 1570
Score = 31.5 bits (68), Expect = 0.44
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 379 EPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSR 489
+PVCA++G Y + C M C + +L QG+C++
Sbjct: 1605 DPVCASNGKTYSNRCDMDADACIRDTKLTVVSQGACAK 1642
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 385 VCATDGYIYPSLCXMRKKTCGKGVRLAPDQ-GSC 483
VC +DG+ Y + C ++ TC +G + Q G C
Sbjct: 1901 VCGSDGWTYDNECFLKLYTCRQGKDVKVQQMGEC 1934
>SB_57638| Best HMM Match : F5_F8_type_C (HMM E-Value=1.7e-11)
Length = 502
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 373 QGEPVCATDGYIYPSLCXMRKKTC--GKGVRLAPDQGSCSRAQGS 501
+G PVCA DG IY +LC MR+ C K +R A +C + S
Sbjct: 414 EGVPVCADDGLIYGNLCKMRQSACELNKIIRPAESDKTCGKLSES 458
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLAPDQGSCSRAQGSKCAT 513
SCP IC + P+C +DG Y + C M + +C + L G C + C +
Sbjct: 5153 SCPDIC--TFEYSPLCGSDGKTYDNQCEMERASCLQNKDLTGKPGKCDPCEDYTCTS 5207
Score = 36.3 bits (80), Expect = 0.016
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSRAQGSKC 507
+C IC L+ PVC TDG Y + C ++ +C + + QG+C G C
Sbjct: 5223 TCNSIC--TLEYAPVCGTDGQSYDNECLLQTASCQRNELIEVATQGTCDPCVGFTC 5276
Score = 34.7 bits (76), Expect = 0.048
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 367 ALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSRAQGSKC 507
+L PVC TDG Y + C ++ +C + ++ QG C Q S C
Sbjct: 5556 SLDYTPVCGTDGETYENECTLQISSCQRNEQVEVASQGHCHPCQRSPC 5603
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSC 483
C IC +L PVC TDG Y + C ++ +C K + +GSC
Sbjct: 5295 CDGIC--SLVYAPVCGTDGQEYSNECNLQIASCRKNELIEVASRGSC 5339
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
SCP I +PVC +DG Y + C +R+ C
Sbjct: 5792 SCPNIL------DPVCGSDGKNYDNECNLRQNAC 5819
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
SCP I +PVC +DG Y + C +R+ C
Sbjct: 5623 SCPSI------NKPVCGSDGKTYNNECELRQYAC 5650
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 331 ARDASCPRICGPALQGE--PVCATDGYIYPSLCXMRKKTCGKGVRLA-PDQGSCSRAQGS 501
A+D +C P E PVC TDG Y +LC +R K C R G C R
Sbjct: 589 AQDGKPVCVCPPGCPSEVKPVCGTDGVTYDNLCSLRLKACTDNTRTRFKAFGECGRTTVP 648
Query: 502 KCATAA 519
+T++
Sbjct: 649 PVSTSS 654
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
CPR C L PVC +DG Y + C MR +C
Sbjct: 1068 CPRRCPKKLM--PVCGSDGKTYNNECLMRAASC 1098
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 334 RDASCP-RICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
R+A C R C L PVC +DG Y S C ++++ C
Sbjct: 279 REAICTCRSC--PLINIPVCGSDGAQYDSECALQQQAC 314
>SB_27078| Best HMM Match : Kazal_2 (HMM E-Value=7.6e-07)
Length = 54
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 352 RICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
R CG + PVC TDG YPS C +R + C
Sbjct: 3 RPCGDEKEAFPVCGTDGNDYPSRCKLRYQAC 33
>SB_3798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 37.1 bits (82), Expect = 0.009
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 358 CGPALQGEPVCATDGYIYPSLCXMRKKTC--GKGVRLAPDQGSCSRAQGSKCAT 513
C + VC DG Y SLC +R TC GK + +A GSC +GS C+T
Sbjct: 134 CNSSPADTEVCGADGVTYGSLCRLRVATCKLGKTIGVA-YLGSCK--EGSDCST 184
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 385 VCATDGYIYPSLCXMRKKTCGKG 453
+C TDG Y S C +R+ +C G
Sbjct: 232 ICGTDGRTYSSFCALREHSCNVG 254
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLAPDQ-GSCSRAQGSKCATAAR 522
CPR C ++ +PVC TDG Y + C +R+ C + + G C+ + +C AR
Sbjct: 733 CPRQC--QVRFKPVCGTDGREYLNRCFLRRNACRTQTSIKVHKWGLCNPCKNVECKFKAR 790
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLAPD-QGSCS 486
+C R C L+ P+C +DG Y + C + +++C + L QG CS
Sbjct: 660 NCSRACPITLR--PLCGSDGKNYWNKCHIERESCRYNLDLKVKWQGFCS 706
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 373 QGEPVCATDGYIYPSLCXMRKKTC 444
+ PVC DG Y S C M + C
Sbjct: 810 EASPVCGQDGRTYSSTCAMDARAC 833
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 337 DASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLAP-DQGSCSR 489
+ C C PA + +CA+DG Y S C + K C G + +G+C +
Sbjct: 46 ECRCTSTCSPAQPSDRLCASDGITYNSKCELNKTACLLGSSITVLYRGACDK 97
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
CP C P EPVC DG Y +LC +RK +C
Sbjct: 4237 CPSRCLP--DKEPVCGADGKTYRNLCEIRKASC 4267
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 379 EPVCATDGYIYPSLCXMRKKTC--GKGVRLAPDQGSC 483
+PVC +DG Y + C +++ C K V +A QG C
Sbjct: 3979 KPVCGSDGKTYKNECELKRAACESKKNVTVA-SQGEC 4014
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 36.3 bits (80), Expect = 0.016
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC--GKGVRLAPDQGSC 483
CP+ C + +P C TDG YP+ C + ++C G+ ++LA D G C
Sbjct: 279 CPKAC--TREYKPACGTDGNTYPNRCVLAIQSCETGEKLQLAHD-GPC 323
Score = 34.7 bits (76), Expect = 0.048
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLAPDQGSC 483
CPR C L PVC TD Y ++C + + C + +G C
Sbjct: 118 CPRACTRELM--PVCGTDQKTYDNMCLLERAACKDDGLMLAHEGPC 161
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 355 ICGPALQGE--PVCATDGYIYPSLCXMRKKTCGKGVRLAP-DQGSC 483
+C A E PVC +DG YP+ C + ++C R++ +GSC
Sbjct: 41 VCNEACTREYAPVCGSDGKTYPNPCALEVESCKTNTRISVIKKGSC 86
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
CP++C L PVC +D Y +LC + + C
Sbjct: 196 CPKVC--TLDYTPVCGSDNKTYANLCNLEVEAC 226
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 35.9 bits (79), Expect = 0.021
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 322 SEAARDASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC-GKGVRLAPDQGSCSRAQ 495
++ +R C IC Q PVC +D Y + C +R TC G +G C +Q
Sbjct: 18 AKGSRPDKCAPICNKMYQ--PVCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQ 74
>SB_11598| Best HMM Match : Kazal_2 (HMM E-Value=2.1e-05)
Length = 79
Score = 35.9 bits (79), Expect = 0.021
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLAPDQGSC 483
CP+ C P Q E CA DG Y ++C + C G + GSC
Sbjct: 34 CPKSC-PVYQ-EEYCANDGKTYSNMCEYDQMVCNTGNEIKLHPGSC 77
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 35.1 bits (77), Expect = 0.036
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 328 AARDASC--PRICGPALQGEPVCATDGYIYPSLCXMRKKTCG-KGVRLAPDQGSCS 486
AA DA C PR C + + VCAT+G + +LC ++K C KG GSC+
Sbjct: 318 AADDAQCVCPRKCPSYV--DQVCATNGETFDNLCRLKKHVCHIKGNFTFYHHGSCT 371
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 35.1 bits (77), Expect = 0.036
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 328 AARDASC--PRICGPALQGEPVCATDGYIYPSLCXMRKKTCG-KGVRLAPDQGSCS 486
AA DA C PR C + + VCAT+G + +LC ++K C KG GSC+
Sbjct: 52 AADDAQCVCPRKCPSYV--DQVCATNGETFDNLCRLKKHVCHIKGNFTFYHHGSCT 105
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 35.1 bits (77), Expect = 0.036
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +1
Query: 331 ARDASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC-GKGVRLAPDQGSCSRAQ 495
+R C IC Q PVC +D Y + C +R TC G +G C +Q
Sbjct: 164 SRPDKCAPICNKMYQ--PVCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQ 217
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC-GKGVRLAPDQGSCSRAQGSKC 507
C R C PA+ PVC TDG Y + C + TC G G C +G C
Sbjct: 44 CVRPC-PAIY-MPVCGTDGKTYGNKCMLGAATCRSNGTITLAYPGECIVEKGYYC 96
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSCSRAQGSKCA 510
C R C L PVC +DG Y + C + C +L +G+C ++ KCA
Sbjct: 118 CMRRCTKELN--PVCGSDGKTYDNPCVFKIAVCQMNGQLRLKHRGACG-SRPDKCA 170
>SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26)
Length = 143
Score = 34.3 bits (75), Expect = 0.063
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLA-PDQGSCSRAQGSKC 507
+CP C + +PVC TD Y + C MR++ C +A +G C C
Sbjct: 26 ACPENCSSTV--DPVCGTDNNTYDNECLMRQQACVANATVAVRRKGHCDPCSKVTC 79
>SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)
Length = 1724
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGK 450
CP C + PVC +DG YP+ C M+ C K
Sbjct: 47 CPMAC--TREYAPVCGSDGKTYPTECVMQVDACSK 79
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 328 AARDASC--PRICGPALQGEPVCATDGYIYPSLCXMRKKTCG-KGVRLAPDQGSCS 486
AA DA C PR C + + VCAT+G + +LC ++K C KG G C+
Sbjct: 95 AADDAQCVCPRKCPSYV--DQVCATNGETFDNLCLLKKHVCHIKGNFTFYHHGGCT 148
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
+CP C + +PVC TD Y + C MR++ C
Sbjct: 160 ACPENCSSTV--DPVCGTDNNTYDNECLMRQQAC 191
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTCGKGVRLA-PDQGSC 483
+CP C + +PVC +D Y + C MR++ C +A +G C
Sbjct: 274 ACPENCSSTV--DPVCGSDNNTYDNECLMRQQACVANTTVAVRRKGDC 319
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 382 PVCATDGYIYPSLCXMRKKTC 444
PVC DG +P+ C MR+ C
Sbjct: 32 PVCTNDGKKFPNECQMRQDAC 52
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
+CP L VC TDG Y +LC +R ++C
Sbjct: 1306 TCPDPAACPLVKSRVCGTDGITYDNLCRLRAESC 1339
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +1
Query: 325 EAARDASCPRICGPALQGE--PVCATDGYIYPSLCXMRKKTC 444
+A D +C A E PVC +DG Y +LC + C
Sbjct: 713 QAGADGKTKCVCSAACTREYAPVCGSDGNTYNNLCLLTAARC 754
>SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19)
Length = 92
Score = 31.9 bits (69), Expect = 0.34
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC-GKGVRLAPDQGSCSRA 492
C R C + PVC TDG Y + C + TC +G +G C A
Sbjct: 39 CNRACTKIYR--PVCGTDGKTYGNKCVLEIATCESEGAVQLAHEGECDSA 86
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
C R C PA+ +PVC TDG Y + C + TC
Sbjct: 24 CVRPC-PAIN-DPVCGTDGKTYGNECMLGAATC 54
>SB_29074| Best HMM Match : Kazal_2 (HMM E-Value=3.3e-16)
Length = 711
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 370 LQGEPVCATDGYIYPSLCXMRKKTCGKGVRLAPDQGSCSRAQGSKCAT 513
L + VC DG YPS C M K + R P + +C + C+T
Sbjct: 400 LPKDMVCGEDGVSYPSECGMIKHSVTFAYR-GPCRETCQQGNSQVCST 446
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 30.7 bits (66), Expect = 0.78
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 328 AARDASC--PRICGPALQGEPVCATDGYIYPSLCXMRKKTCG-KGVRLAPDQGSC 483
AA DA C P C PA + VC T+G + +LC +K C KG GSC
Sbjct: 207 AADDAQCVCPSKC-PAYIDQ-VCGTNGQTFDNLCLFKKHVCRIKGNFSYLHHGSC 259
>SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16)
Length = 98
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC-GKGVRLAPDQGSCS 486
C R C P+C TDG Y + C + TC +G +G CS
Sbjct: 39 CNRACKKIYS--PMCGTDGKTYGNKCMLEIATCESEGAVKLAHEGECS 84
>SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21)
Length = 85
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC-GKGVRLAPDQGSC 483
C IC P + PVC +D Y + C +R TC G +G C
Sbjct: 40 CAPIC-PKIY-RPVCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKC 84
>SB_23052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +1
Query: 370 LQGEPVCATDGYIYPSLCXMR---KKTCGKG 453
+Q EPVC TDG +P+LC + KK KG
Sbjct: 187 MQLEPVCDTDGQQHPNLCSLHFQGKKLAYKG 217
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 337 DASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
+A C + P + +PVC +DG Y ++C +R+ C
Sbjct: 269 EAVCTCLSCPNML-DPVCGSDGKNYDNVCKLRQNAC 303
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
SCP I +PVC +DG Y + C +R+ C
Sbjct: 113 SCPNIL------DPVCGSDGKNYDNECNLRQNAC 140
>SB_40279| Best HMM Match : zf-MYM (HMM E-Value=0.66)
Length = 364
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 456 HSFPASLLPHLAERGVDVPVGGADGLPLQRRPADARTRRVASCLARRREDKEGSSGEEVG 277
H PA + A V + V + LPL D RT A + +RED +G + +++
Sbjct: 202 HMDPAEQPAYSAYSDVTIDVERIENLPLDGDLPDIRTVEFAGDV--QREDDQGPAPQQIN 259
Query: 276 PG 271
PG
Sbjct: 260 PG 261
>SB_41491| Best HMM Match : Kazal_1 (HMM E-Value=1.1e-12)
Length = 77
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 349 PRICGPALQGEPVCATDGYIYPSLCXMR 432
P +C LQ +PVC +DG Y ++C ++
Sbjct: 29 PTLC--TLQYDPVCGSDGKTYGNMCFLK 54
>SB_37368| Best HMM Match : Kazal_1 (HMM E-Value=9.2e-09)
Length = 68
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +1
Query: 340 ASCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
A+C C PVC +D Y + C + ++ C
Sbjct: 6 ANCSFSCDDGFHQTPVCGSDDVTYANACTLDERNC 40
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -1
Query: 432 PHLAERGVDVPVGGADGLPLQRRPADARTRRVASCLARRREDKEGSSGEEV 280
P +G D+ D L P R RR ++R+D + SSGE++
Sbjct: 677 PEFEFKGEDIESDDDDALEAAVVPTSQRRRRSTRIKRQQRQDSDESSGEDL 727
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 343 SCPRICGPALQGEPV-CATDGYIYPSLCXMRKKTCGKGVRLAPDQGSCSRAQGSKCATA 516
SCP++CGP G PV C +D I P+ C C G D + S C A
Sbjct: 1723 SCPKVCGP---GCPVQCCSDLNICPANC--TGSACKPGCITIEDSVTVSLGNDKLCPEA 1776
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 29.1 bits (62), Expect = 2.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 379 EPVCATDGYIYPSLCXMRKKTC 444
+PVC +DG YP+ C + + C
Sbjct: 90 KPVCGSDGVTYPNHCELHRIAC 111
>SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 382 PVCATDGYIYPSLCXMRKKTCGKGVRL-APDQGSC 483
PVC +DG YP+ M + C K L QG C
Sbjct: 20 PVCGSDGRTYPNRASMEVQGCLKNTVLKIVSQGEC 54
>SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 352
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 379 EPVCATDGYIYPSLCXMRKKTC 444
+PVC +DG Y S C +R C
Sbjct: 304 DPVCGSDGVTYRSKCHLRVAKC 325
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 343 SCPRICGPALQGEPVCATDGYIYPSLCXMRKKTC 444
SCP P Q +PVC +DG Y + C + C
Sbjct: 234 SCPPRTCPK-QDKPVCGSDGKTYTNGCELATAKC 266
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +1
Query: 331 ARDAS--CPRICGPALQGEPVCATDGYIYPSLCXMRKKTC---GKGVRLAPD-QGSCSRA 492
A+D S CPRI PVC +D Y ++C R C +G +L +G C +
Sbjct: 32 AKDCSRPCPRIL------TPVCGSDRVSYSNMCAFRNAQCLAVEQGQKLLLQYEGECGKP 85
Query: 493 QGSKCATAAR 522
+ K A ++
Sbjct: 86 KPIKKAKVSK 95
>SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20)
Length = 87
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 379 EPVCATDGYIYPSLCXMRKKTCGKGVRLA-PDQGSC 483
+PVC +D Y + C MR++ C +A +G C
Sbjct: 8 DPVCGSDNNTYDNECLMRQQACVANTTVAVRRKGDC 43
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 27 RPLHPPRHDRAPRRLLAFTKSRLTSS 104
RP+ PPR RAP +A TK+ + S+
Sbjct: 2543 RPIQPPRLSRAPSVRMANTKAPMIST 2568
>SB_14642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -1
Query: 354 ARTRRVASCLARRREDKEGSSGEEV----GPGLHGAASWSRSS 238
A R V +C+++ R K+GS EE+ P L G+ +R S
Sbjct: 350 AAVRLVPTCISKLRHIKQGSGAEELEMSDNPALGGSGGSNRPS 392
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,281,631
Number of Sequences: 59808
Number of extensions: 232248
Number of successful extensions: 705
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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