Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20649
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.4  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   5.5  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   5.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.7  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   9.7  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 369 RLTRMDIRRNEALYRLHNFL 428
           RL+R DIR  + +Y+L +FL
Sbjct: 4   RLSRNDIRFLKVMYKLSHFL 23


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 443 CRLCYKKVMKPIQCLVTPDIHTGEP 369
           C +C+KK    +       +HTGEP
Sbjct: 197 CPVCHKKFTNALVLQQHIRLHTGEP 221


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = +2

Query: 8   QRKRDRKEQEKNPQEK 55
           Q +R+R+EQE++ Q++
Sbjct: 74  QARREREEQERHKQQQ 89


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = +2

Query: 8   QRKRDRKEQEKNPQEK 55
           Q +R+R+EQE++ Q++
Sbjct: 225 QARREREEQERHKQQQ 240


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = +2

Query: 8   QRKRDRKEQEKNPQEK 55
           Q +R+R+EQE++ Q++
Sbjct: 284 QARREREEQERHKQQQ 299


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 78  LMKILFEKMPHSKNTI 125
           ++KIL EK  H KN I
Sbjct: 170 VLKILVEKYRHQKNFI 185


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 8   QRKRDRKEQEKNPQEKPNGDN 70
           +R ++RK+ +K  +EK   DN
Sbjct: 208 RRAKERKQNKKRIEEKSQIDN 228


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
 Frame = -1

Query: 110 MRHFLEQYLHKPFDYPRSVSLV-------DFSLAPCGHVSFAR 3
           +++   QY+H+P+  P  V          D+SL    H + +R
Sbjct: 449 LKNMPSQYIHEPWTAPEQVQRAAKCIIGKDYSLPMVNHAAASR 491


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 11  RKRDRKEQEKNPQEKPNGDNRKAYEDIVRENAA 109
           +KR R  +  + +  P G  +K YE+ V  + A
Sbjct: 94  QKRARDWERLSKKYDPQGQYKKRYEEHVATSRA 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,155
Number of Sequences: 336
Number of extensions: 3504
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)