Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20648
(689 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 143 1e-34
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 116 2e-26
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 1e-24
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 109 3e-24
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 81 8e-16
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 70 2e-12
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 33 0.29
SB_27502| Best HMM Match : Seryl_tRNA_N (HMM E-Value=1.6) 30 1.5
SB_16057| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26) 30 2.0
SB_20801| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.46) 30 2.0
SB_41346| Best HMM Match : Ion_trans (HMM E-Value=0) 29 2.7
SB_42147| Best HMM Match : Thioredoxin (HMM E-Value=0.3) 29 4.7
SB_22877| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_6867| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.5) 28 8.2
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 143 bits (346), Expect = 1e-34
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +1
Query: 256 GERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQ 435
GERLIGD AKNQLTTNPENTVFDAKRLIGR W D +VQ+D+KFFPFKVV+KN KPHVQV+
Sbjct: 745 GERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVK 804
Query: 436 TSQGDKVFAPEEISAMVLTKMKET 507
K FA EEISAMVLTKMKET
Sbjct: 805 VKDEIKTFAAEEISAMVLTKMKET 828
Score = 119 bits (286), Expect = 3e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 510 EAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGLDKKEGE 689
EAYLGKKVTHAVVTVPAYFNDAQRQATKDAG I+GL VMRIINEPTAAAIAYG+DKKEGE
Sbjct: 830 EAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKKEGE 889
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +2
Query: 122 IGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQ 253
+GTVIGIDLGTTYSCVGV+KNGRVEIIANDQGNRITPSYVAFT+
Sbjct: 700 VGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTE 743
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 116 bits (279), Expect = 2e-26
Identities = 53/83 (63%), Positives = 65/83 (78%)
Frame = +1
Query: 259 ERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQT 438
ERL+GDAAKNQ+ NPENT+FDAKRLIGR + D TVQ D+K +PFK++ N+KP +QV+
Sbjct: 48 ERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEY 107
Query: 439 SQGDKVFAPEEISAMVLTKMKET 507
K FA EEIS+MVL KMKET
Sbjct: 108 KGERKTFAAEEISSMVLGKMKET 130
Score = 106 bits (255), Expect = 1e-23
Identities = 48/56 (85%), Positives = 55/56 (98%)
Frame = +3
Query: 510 EAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGLDK 677
EAYLG+KVT AV+TVPAYFND+QRQATKDAGTI+GLNV+R+INEPTAAA+AYGLDK
Sbjct: 132 EAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDK 187
Score = 78.2 bits (184), Expect = 6e-15
Identities = 34/39 (87%), Positives = 37/39 (94%)
Frame = +2
Query: 134 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFT 250
IGIDLGTTYSCVGV++NG+VEIIANDQGNR TPSYV FT
Sbjct: 7 IGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFT 45
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 110 bits (264), Expect = 1e-24
Identities = 53/60 (88%), Positives = 56/60 (93%)
Frame = +3
Query: 510 EAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGLDKKEGE 689
EAYLG KVT AVVTVPAYFND+QRQATKDAG ISGLNV+RIINEPTAAAIAYGLDKK G+
Sbjct: 225 EAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQ 284
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 259 ERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQT 438
ERL+GDAAKNQ+ NP NT+FDAKRLIGR + D V+ D+K + F+VV + +P V+V+
Sbjct: 48 ERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEY 107
Query: 439 SQGDKVFAPEEI 474
K F EE+
Sbjct: 108 KGETKTFFAEEV 119
Score = 77.8 bits (183), Expect = 8e-15
Identities = 34/39 (87%), Positives = 38/39 (97%)
Frame = +2
Query: 134 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFT 250
IGIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAFT
Sbjct: 7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT 45
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +3
Query: 510 EAYLGKKVTHAVVTVPAYFNDAQRQATKDAG 602
EAYLG KVT AVVTVPAYFND+QRQATKDAG
Sbjct: 157 EAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 109 bits (261), Expect = 3e-24
Identities = 52/86 (60%), Positives = 63/86 (73%)
Frame = +1
Query: 250 SSGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQ 429
S ERLIGDAAKNQ+ NPENTVFDAKRLIGR++ D V D+ +PF V+ + +P +Q
Sbjct: 45 SDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQ 104
Query: 430 VQTSQGDKVFAPEEISAMVLTKMKET 507
V+ K F PEEIS+MVLTKMKET
Sbjct: 105 VEFKGEKKSFFPEEISSMVLTKMKET 130
Score = 109 bits (261), Expect = 3e-24
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +3
Query: 510 EAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGLDKKEG 686
EAYLG KVT AVVTVPAYF+D+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLDKK G
Sbjct: 132 EAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVG 190
Score = 75.8 bits (178), Expect = 3e-14
Identities = 32/39 (82%), Positives = 38/39 (97%)
Frame = +2
Query: 134 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFT 250
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFS 45
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 81.0 bits (191), Expect = 8e-16
Identities = 48/87 (55%), Positives = 56/87 (64%), Gaps = 24/87 (27%)
Frame = +3
Query: 498 EGDCEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLN------------------- 620
+ D EA+LG+ V AV+TVPA+FNDAQRQATKDAGTI+GL+
Sbjct: 27 KADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRP 86
Query: 621 -----VMRIINEPTAAAIAYGLDKKEG 686
V+RIINEPTAAAIAYGLDK G
Sbjct: 87 HGRSRVLRIINEPTAAAIAYGLDKARG 113
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/59 (57%), Positives = 44/59 (74%)
Frame = +3
Query: 510 EAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGLDKKEG 686
E L VT AV++VPA F+ QR AT A +++G+ V+R+INEPTAAA+AYGL KKEG
Sbjct: 162 ERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKKEG 220
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/42 (54%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
Frame = +2
Query: 131 VIGIDLGTTYSCVGVYK--NGRVEIIANDQGNRITPSYVAFT 250
+IGIDLGTTYSCVG Y+ +GR++I +++ +++ PS VAFT
Sbjct: 33 IIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFT 74
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 265 LIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFKV-VEKNSKPHVQVQTS 441
L+G+ A +Q NP+NT++DAKR IG+ ++ Q + K + F+V +K V
Sbjct: 79 LVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKK 138
Query: 442 QGDKVFAPEEISAMVLTKMK 501
V PEEI V+ K++
Sbjct: 139 GNFTVITPEEIGGYVIKKLR 158
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +1
Query: 292 LTTNPENTVFDAKRLIGREWSDQTVQHDVKFFPFKVVE-KNSKPHVQVQTSQGDKVFAPE 468
+ +N +NT+ KR IGR++SD VQ ++ P+KVVE N +QVQ +VF+PE
Sbjct: 115 MISNLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPE 174
Query: 469 EISAMVLTKMKET 507
++ AM+ T++K T
Sbjct: 175 QVMAMLFTRLKTT 187
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +3
Query: 510 EAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGLDKKE 683
E L KVT V++VP+Y+ D QR+ DA +GLN +R++N+ TA ++AYG+ K++
Sbjct: 189 EIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQD 246
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 128 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVA 244
+V+G D+G + V + G +E +AN+ +R TPS+V+
Sbjct: 2 SVVGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVS 40
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +3
Query: 510 EAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTISGLNVMRIINEPTAAAIAYGL 671
E + + V+TVP +FN A+R+A A + GLNV++I+N TA A+ YGL
Sbjct: 98 EQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 182 NGRVEIIANDQGNRITPSYVAFT 250
+G IIAND G+R+TP+ VAF+
Sbjct: 82 DGNTTIIANDAGDRVTPAMVAFS 104
>SB_27502| Best HMM Match : Seryl_tRNA_N (HMM E-Value=1.6)
Length = 163
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 325 AKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKE 504
A+RL +E ++++V + ++ K KP +K+ PE S++V TK+ E
Sbjct: 60 AERLNMKEKTEKSVNAQLTELVNNLIFKAEKPDEAEMKESMEKIIRPENCSSLVATKLDE 119
Query: 505 TV 510
+
Sbjct: 120 LI 121
>SB_16057| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +1
Query: 205 Q*PGKPHHT---FIRGLHSSGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQTVQHD 375
Q P K H F R ++ G R+ D+ + E T + KR++ R+W HD
Sbjct: 34 QFPAKSHGVEAAFARAVYDKGTRIADDSVR-------EITGYFTKRMVSRDWQFPYKDHD 86
Query: 376 VKFFPFKVVEKNSKPHVQVQTS 441
FP VE + P + T+
Sbjct: 87 EHGFP---VESDKLPLEYISTT 105
>SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26)
Length = 245
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = +1
Query: 301 NPENTVFDAKRLIGREWSDQTVQHDVKFF----PFKVVEKNSKPHVQVQTSQGDK 453
NP+ FD R +G EW T + +F K K PH + Q + DK
Sbjct: 41 NPQMHNFDISRKLGLEWQKLTEEEKAYYFEEAKKLKEEHKERYPHYKYQPRKRDK 95
>SB_20801| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.46)
Length = 521
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 325 AKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKE 504
A+RL +E ++++V + ++ K KP +K+ PE S++V TK+ E
Sbjct: 276 AERLNMKEKTEKSVDAQLADLVNNLIFKAEKPDEAEMKESMEKIIRPENCSSLVATKVDE 335
Query: 505 TV 510
+
Sbjct: 336 LI 337
>SB_41346| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1264
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 368 CTVWSLHSRPIRRLASKTVFSGLVVSWFLAASPI 267
C VW + +RRL VF G+++ + +AAS I
Sbjct: 387 CAVWKVMRYKVRRLVEHKVFEGIIL-FLIAASSI 419
>SB_42147| Best HMM Match : Thioredoxin (HMM E-Value=0.3)
Length = 787
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 350 HSRPIRRLASKTVFSGLVVSWF 285
H I RL+S+ VFSG V+ WF
Sbjct: 114 HKILIDRLSSRFVFSGTVIQWF 135
>SB_22877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 572 IIEISRHSNNSMSNLFSKVSLTVSFILVRTIAEISSG 462
II++SRH N +S VS + RT++EI++G
Sbjct: 57 IIQLSRHENLQSITNYSTVSERQQMNMSRTLSEIATG 93
>SB_6867| Best HMM Match : ATP-synt_E_2 (HMM E-Value=2.5)
Length = 325
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 325 AKRLIGREWSDQTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVLTKMKE 504
A+RL +E ++++V + ++ K+ KP K+ PE + +V TK+ E
Sbjct: 92 AERLNMKEKTEKSVNAQLAELVNNLIFKDEKPDEAEMKESMKKIIRPENCNLLVATKVDE 151
Query: 505 TV 510
+
Sbjct: 152 LI 153
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,496,684
Number of Sequences: 59808
Number of extensions: 414071
Number of successful extensions: 1027
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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