Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20646
(634 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 33 0.003
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 33 0.003
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 29 0.028
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 26 0.35
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 26 0.35
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.46
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.1
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.3
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 5.7
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 5.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 5.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 5.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 7.5
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 87 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 182
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 353 FLINLIDSPGHVDFSSEVTAALRVTDGAL 439
+ + +ID+PGH DF + D A+
Sbjct: 85 YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 87 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 182
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 353 FLINLIDSPGHVDFSSEVTAALRVTDGAL 439
+ + +ID+PGH DF + D A+
Sbjct: 85 YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 29.5 bits (63), Expect = 0.028
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 114 MSVIAHVDHGKSTLTDSL 167
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
Score = 26.6 bits (56), Expect = 0.20
Identities = 16/68 (23%), Positives = 26/68 (38%)
Frame = +2
Query: 344 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAEASSLF 523
E G + +D+PGH F S +TD + QT + A +
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVPII 249
Query: 524 CFMNKMDR 547
+NK+D+
Sbjct: 250 VAINKIDK 257
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.8 bits (54), Expect = 0.35
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 450 TVCLVCVYKPKQYCVRLLP 506
TV LVC+Y PK Y + P
Sbjct: 749 TVTLVCLYSPKIYIILFQP 767
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.8 bits (54), Expect = 0.35
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 450 TVCLVCVYKPKQYCVRLLP 506
TV LVC+Y PK Y + P
Sbjct: 839 TVTLVCLYSPKIYIILFQP 857
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.46
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 111 NMSVIAHVDHGKSTLTDSL 167
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 353 FLINLIDSPGHVDFSSEVTAALRVTDGAL 439
+ + +ID+PGH DF + D A+
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCAV 40
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 353 FLINLIDSPGHVDFSSEVTAALRVTDGAL 439
+ + +ID+PGH DF + D A+
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCAV 56
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 4.3
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 92 VHHPTDLVYREIHH 51
+HHP + R++HH
Sbjct: 400 LHHPNCKINRKVHH 413
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 272 ISMFFELEEKDLVFITNPDQREKSEKGFLI 361
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 456 TQSTTTRAP-SVTRSAAVTSEEKSTC 382
+ STTT +P + T+S V + STC
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTC 349
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 272 ISMFFELEEKDLVFITNPDQREKSEKGFLI 361
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/33 (27%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 450 TVCLVCVYKPKQYCVRLLP-RHQAYSVS*TKWT 545
+V + C++ PK Y + + P R+ S+ T+++
Sbjct: 891 SVTIACLFSPKLYIILIRPERNVRQSMMPTRYS 923
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 605 QYAGTSGIVLQLQVG 561
+Y SG+V+QLQ G
Sbjct: 1549 EYGAVSGLVVQLQRG 1563
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,988
Number of Sequences: 438
Number of extensions: 3860
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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