Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20645
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   9.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.7  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 347 HHWLKVDFNRWQDEDESGDDLDNMND 424
           H + K+D    +  D+  DD D+M++
Sbjct: 274 HKYEKIDKEEHESMDDDDDDDDDMSN 299


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -2

Query: 353 NGVSFYHLLMKASMAHQPFLSPIVPQLTFLC*PHALFRINFSIKWY*NLVHF 198
           +G+S YHL    +M   P        L   C P  + ++  S++ Y +L+ +
Sbjct: 580 SGLS-YHLSCAENMMFDPMSGKCEYSLGEKCRPGQIIQVANSLRQYEDLLEY 630


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 431 KTCHSYCLNRLH 396
           K C SYC N  H
Sbjct: 281 KNCLSYCFNLYH 292


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 431 KTCHSYCLNRLH 396
           K C SYC N  H
Sbjct: 281 KNCLSYCFNLYH 292


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -2

Query: 473 FHYLHQIECSYLCPKTCHSY 414
           FH L   +   LC   CH Y
Sbjct: 156 FHLLELEKVHELCDNFCHRY 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,466
Number of Sequences: 336
Number of extensions: 3210
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)