Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20645
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L24804-1|AAA18537.1| 160|Homo sapiens p23 protein. 51 5e-06
BC003005-1|AAH03005.1| 160|Homo sapiens prostaglandin E synthas... 51 5e-06
BC019324-1|AAH19324.1| 525|Homo sapiens alanyl-tRNA synthetase ... 35 0.32
BC004172-1|AAH04172.1| 525|Homo sapiens alanyl-tRNA synthetase ... 35 0.32
BC058912-1|AAH58912.1| 362|Homo sapiens protein tyrosine phosph... 33 1.3
BC047685-1|AAH47685.1| 362|Homo sapiens protein tyrosine phosph... 33 1.3
BC035508-1|AAH35508.1| 361|Homo sapiens PTPLAD1 protein protein. 33 1.3
AK074898-1|BAC11277.1| 362|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK027421-1|BAB55101.1| 362|Homo sapiens protein ( Homo sapiens ... 33 1.3
AJ271091-1|CAB69070.1| 370|Homo sapiens B-ind1 protein protein. 33 1.3
BC101353-1|AAI01354.1| 545|Homo sapiens potassium channel, subf... 30 9.1
BC101352-1|AAI01353.1| 545|Homo sapiens potassium channel, subf... 30 9.1
AL354723-2|CAI15124.1| 545|Homo sapiens potassium channel, subf... 30 9.1
AF348983-1|AAL83910.1| 545|Homo sapiens voltage-gated potassium... 30 9.1
>L24804-1|AAA18537.1| 160|Homo sapiens p23 protein.
Length = 160
Score = 50.8 bits (116), Expect = 5e-06
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 8/53 (15%)
Frame = +2
Query: 317 WPSLTSDKKKHHWLKVDFNRWQD-EDESGDDLDN-------MNDMFSDKDMNI 451
WP LT ++ K +WL VDFN W+D ED+S +D+ N MN+M D+D+++
Sbjct: 86 WPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDEDVDL 138
>BC003005-1|AAH03005.1| 160|Homo sapiens prostaglandin E synthase 3
(cytosolic) protein.
Length = 160
Score = 50.8 bits (116), Expect = 5e-06
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 8/53 (15%)
Frame = +2
Query: 317 WPSLTSDKKKHHWLKVDFNRWQD-EDESGDDLDN-------MNDMFSDKDMNI 451
WP LT ++ K +WL VDFN W+D ED+S +D+ N MN+M D+D+++
Sbjct: 86 WPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDEDVDL 138
>BC019324-1|AAH19324.1| 525|Homo sapiens alanyl-tRNA synthetase
domain containing 1 protein.
Length = 525
Score = 34.7 bits (76), Expect = 0.32
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 293 KEKVDEPYWPSLTSDKKKHHWLKVDFNRWQD 385
KEKV WP LT + K WL VDF+ W+D
Sbjct: 64 KEKVA---WPRLTKEDIKPVWLSVDFDNWRD 91
>BC004172-1|AAH04172.1| 525|Homo sapiens alanyl-tRNA synthetase
domain containing 1 protein.
Length = 525
Score = 34.7 bits (76), Expect = 0.32
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 293 KEKVDEPYWPSLTSDKKKHHWLKVDFNRWQD 385
KEKV WP LT + K WL VDF+ W+D
Sbjct: 64 KEKVA---WPRLTKEDIKPVWLSVDFDNWRD 91
>BC058912-1|AAH58912.1| 362|Homo sapiens protein tyrosine
phosphatase-like A domain containing 1 protein.
Length = 362
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 278 EVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESGDDL 409
+V + +K +W LT +K+ +L DF+RW DE ++ +L
Sbjct: 77 QVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 51 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFK 176
M +QV P V WAQR+ ++L + + + P I+I + FK
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFK 43
>BC047685-1|AAH47685.1| 362|Homo sapiens protein tyrosine
phosphatase-like A domain containing 1 protein.
Length = 362
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 278 EVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESGDDL 409
+V + +K +W LT +K+ +L DF+RW DE ++ +L
Sbjct: 77 QVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 51 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFK 176
M +QV P V WAQR+ ++L + + + P I+I + FK
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFK 43
>BC035508-1|AAH35508.1| 361|Homo sapiens PTPLAD1 protein protein.
Length = 361
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 278 EVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESGDDL 409
+V + +K +W LT +K+ +L DF+RW DE ++ +L
Sbjct: 77 QVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 51 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFK 176
M +QV P V WAQR+ ++L + + + P I+I + FK
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFK 43
>AK074898-1|BAC11277.1| 362|Homo sapiens protein ( Homo sapiens
cDNA FLJ90417 fis, clone NT2RP3000171, weakly similar to
Mus musculus partial mRNA for B-IND1 protein (B-ind1
gene). ).
Length = 362
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 278 EVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESGDDL 409
+V + +K +W LT +K+ +L DF+RW DE ++ +L
Sbjct: 77 QVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 51 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFK 176
M +QV P V WAQR+ ++L + + + P I+I + FK
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFK 43
>AK027421-1|BAB55101.1| 362|Homo sapiens protein ( Homo sapiens
cDNA FLJ14515 fis, clone NT2RM1000800, weakly similar to
Mus musculus partial mRNA for B-IND1 protein. ).
Length = 362
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 278 EVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESGDDL 409
+V + +K +W LT +K+ +L DF+RW DE ++ +L
Sbjct: 77 QVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 51 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFK 176
M +QV P V WAQR+ ++L + + + P I+I + FK
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFK 43
>AJ271091-1|CAB69070.1| 370|Homo sapiens B-ind1 protein protein.
Length = 370
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 278 EVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESGDDL 409
+V + +K +W LT +K+ +L DF+RW DE ++ +L
Sbjct: 77 QVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMEL 120
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 51 MTSQVTPPSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFK 176
M +QV P V WAQR+ ++L + + + P I+I + FK
Sbjct: 1 MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFK 43
>BC101353-1|AAI01354.1| 545|Homo sapiens potassium channel,
subfamily V, member 2 protein.
Length = 545
Score = 29.9 bits (64), Expect = 9.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 347 HHWLKVDFNRWQDEDESGDDLDNMNDMFSDKD 442
H W + ++N + +EDE G++ D D +++D
Sbjct: 44 HGWTEGNYNYYIEEDEDGEEEDQWKDDLAEED 75
>BC101352-1|AAI01353.1| 545|Homo sapiens potassium channel,
subfamily V, member 2 protein.
Length = 545
Score = 29.9 bits (64), Expect = 9.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 347 HHWLKVDFNRWQDEDESGDDLDNMNDMFSDKD 442
H W + ++N + +EDE G++ D D +++D
Sbjct: 44 HGWTEGNYNYYIEEDEDGEEEDQWKDDLAEED 75
>AL354723-2|CAI15124.1| 545|Homo sapiens potassium channel,
subfamily V, member 2 protein.
Length = 545
Score = 29.9 bits (64), Expect = 9.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 347 HHWLKVDFNRWQDEDESGDDLDNMNDMFSDKD 442
H W + ++N + +EDE G++ D D +++D
Sbjct: 44 HGWTEGNYNYYIEEDEDGEEEDQWKDDLAEED 75
>AF348983-1|AAL83910.1| 545|Homo sapiens voltage-gated potassium
channel Kv11.1 protein.
Length = 545
Score = 29.9 bits (64), Expect = 9.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 347 HHWLKVDFNRWQDEDESGDDLDNMNDMFSDKD 442
H W + ++N + +EDE G++ D D +++D
Sbjct: 44 HGWTEGNYNYYIEEDEDGEEEDQWKDDLAEED 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,839,754
Number of Sequences: 237096
Number of extensions: 1793001
Number of successful extensions: 3336
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3324
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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