Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20645
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061317-1|AAL28865.1|  184|Drosophila melanogaster LD23532p pro...    57   2e-08
AE014297-998|AAF54424.1|  184|Drosophila melanogaster CG16817-PA...    57   2e-08
AY071533-1|AAL49155.1|  371|Drosophila melanogaster RE57556p pro...    47   3e-05
AE014134-2355|AAF53307.1|  371|Drosophila melanogaster CG9267-PA...    47   3e-05
BT010298-1|AAQ23616.1|  854|Drosophila melanogaster LD10043p pro...    29   4.6  
AE014296-446|AAF47640.1|  854|Drosophila melanogaster CG9004-PA ...    29   4.6  

>AY061317-1|AAL28865.1|  184|Drosophila melanogaster LD23532p
           protein.
          Length = 184

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
 Frame = +3

Query: 45  LNMTSQVTPPSVSWAQRNARIFLTFNVECEKPDINIEPKSITFKG--ICEPEKKMHEVLI 218
           ++  + + PP VSWAQRN  I++  +VEC+  +  +  K+ TFKG  + +P KK +EV +
Sbjct: 1   MSAAAGLIPPPVSWAQRNDLIYVIIDVECKDIEHKVTEKTFTFKGVNVLDPSKK-YEVTL 59

Query: 219 PLYAEVDPKK 248
               EVDP+K
Sbjct: 60  NFLHEVDPEK 69



 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = +2

Query: 260 NKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDE--DESGDDLDN 415
           N GR +E  + K K   PYW SLT+DK K H+LK +F +W+DE  DE GD  DN
Sbjct: 74  NIGRCLEFTIPK-KAAGPYWSSLTTDKTKLHFLKANFAKWRDESDDEEGDQKDN 126


>AE014297-998|AAF54424.1|  184|Drosophila melanogaster CG16817-PA
           protein.
          Length = 184

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
 Frame = +3

Query: 45  LNMTSQVTPPSVSWAQRNARIFLTFNVECEKPDINIEPKSITFKG--ICEPEKKMHEVLI 218
           ++  + + PP VSWAQRN  I++  +VEC+  +  +  K+ TFKG  + +P KK +EV +
Sbjct: 1   MSAAAGLIPPPVSWAQRNDLIYVIIDVECKDIEHKVTEKTFTFKGVNVLDPSKK-YEVTL 59

Query: 219 PLYAEVDPKK 248
               EVDP+K
Sbjct: 60  NFLHEVDPEK 69



 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = +2

Query: 260 NKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDE--DESGDDLDN 415
           N GR +E  + K K   PYW SLT+DK K H+LK +F +W+DE  DE GD  DN
Sbjct: 74  NIGRCLEFTIPK-KAAGPYWSSLTTDKTKLHFLKANFAKWRDESDDEEGDQKDN 126


>AY071533-1|AAL49155.1|  371|Drosophila melanogaster RE57556p
           protein.
          Length = 371

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 16/39 (41%), Positives = 27/39 (69%)
 Frame = +2

Query: 278 EVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDE 394
           ++ L   K++  +WP L +  +K HWLK+DF+RW+ ED+
Sbjct: 76  KIELQIRKLEPEWWPRLVATPQKPHWLKIDFDRWRTEDD 114


>AE014134-2355|AAF53307.1|  371|Drosophila melanogaster CG9267-PA
           protein.
          Length = 371

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 16/39 (41%), Positives = 27/39 (69%)
 Frame = +2

Query: 278 EVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDE 394
           ++ L   K++  +WP L +  +K HWLK+DF+RW+ ED+
Sbjct: 76  KIELQIRKLEPEWWPRLVATPQKPHWLKIDFDRWRTEDD 114


>BT010298-1|AAQ23616.1|  854|Drosophila melanogaster LD10043p
           protein.
          Length = 854

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +2

Query: 272 LIEVLLAKEKVDEPYWPSLTSDKKK--HHWLKVDFNRWQDEDESGDDLDNMNDMFSDKD 442
           L++ +L  E+ ++  W      KKK      K +   W DE+E  +D D   D FS+ D
Sbjct: 205 LLDFVLDDEE-EKRKWEEKQERKKKLKEQQEKEEAGMWSDEEEDKEDRDEPMDNFSEDD 262


>AE014296-446|AAF47640.1|  854|Drosophila melanogaster CG9004-PA
           protein.
          Length = 854

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +2

Query: 272 LIEVLLAKEKVDEPYWPSLTSDKKK--HHWLKVDFNRWQDEDESGDDLDNMNDMFSDKD 442
           L++ +L  E+ ++  W      KKK      K +   W DE+E  +D D   D FS+ D
Sbjct: 205 LLDFVLDDEE-EKRKWEEKQERKKKLKEQQEKEEAGMWSDEEEDKEDRDEPMDNFSEDD 262


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,739,897
Number of Sequences: 53049
Number of extensions: 498433
Number of successful extensions: 1489
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)