Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20644
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.4  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   4.1  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   5.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   7.2  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 257 SRGTCLPAPVSLKKVLKES 201
           S+G C P  V LK+VL E+
Sbjct: 49  SKGPCPPQGVDLKRVLPEA 67


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -3

Query: 441 QRACGFCPKPNLRFPFQWCSDHGHSCW 361
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 366 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 455
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -2

Query: 574 DGELQFRLLAVVNGETLHQ*GSNPEPVPPPKEWKIRNPCRPVHWSASLRILSK 416
           +G+L  ++   +NGE        P   PP    + + P  P  W+     LS+
Sbjct: 8   EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSE 60


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -2

Query: 574 DGELQFRLLAVVNGETLHQ*GSNPEPVPPPKEWKIRNPCRPVHWSASLRILSK 416
           +G+L  ++   +NGE        P   PP    + + P  P  W+     LS+
Sbjct: 8   EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSE 60


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -2

Query: 574 DGELQFRLLAVVNGETLHQ*GSNPEPVPPPKEWKIRNPCRPVHWSASLRILSK 416
           +G+L  ++   +NGE        P   PP    + + P  P  W+     LS+
Sbjct: 10  EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSE 62


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 254 RGTCLPAPVSLKKVLKES 201
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/45 (24%), Positives = 19/45 (42%)
 Frame = -2

Query: 574 DGELQFRLLAVVNGETLHQ*GSNPEPVPPPKEWKIRNPCRPVHWS 440
           +G+L  ++   +NGE        P   PP    + + P  P  W+
Sbjct: 10  EGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQPWT 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,811
Number of Sequences: 336
Number of extensions: 4087
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)