Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20644
(689 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 60 9e-11
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 60 9e-11
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 60 9e-11
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 60 9e-11
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 5e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 27 0.070
AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein. 27 0.56
AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein. 27 0.56
AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein. 27 0.56
AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein. 27 0.56
AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein. 27 0.56
AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein. 27 0.56
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 27 0.56
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 27 0.56
EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein. 25 3.0
AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450 pr... 23 9.1
AF515521-1|AAM61888.1| 233|Anopheles gambiae glutathione S-tran... 23 9.1
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 59.7 bits (138), Expect = 9e-11
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +3
Query: 381 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 509
HYT G E+VD VLD +RK + C LQGF + HS GGGTGSG+
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGM 43
Score = 53.2 bits (122), Expect = 7e-09
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+
Sbjct: 45 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 59.7 bits (138), Expect = 9e-11
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +3
Query: 381 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 509
HYT G E+VD VLD +RK + C LQGF + HS GGGTGSG+
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGM 43
Score = 53.2 bits (122), Expect = 7e-09
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+
Sbjct: 45 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 59.7 bits (138), Expect = 9e-11
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +3
Query: 381 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 509
HYT G E+VD VLD +RK + C LQGF + HS GGGTGSG+
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGM 43
Score = 53.2 bits (122), Expect = 7e-09
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+
Sbjct: 45 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 59.7 bits (138), Expect = 9e-11
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +3
Query: 381 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 509
HYT G E+VD VLD +RK + C LQGF + HS GGGTGSG+
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGM 43
Score = 53.2 bits (122), Expect = 7e-09
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+
Sbjct: 45 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 103
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 50.4 bits (115), Expect = 5e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWE 129
MRECISVHVGQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 37.9 bits (84), Expect = 3e-04
Identities = 21/45 (46%), Positives = 23/45 (51%)
Frame = +2
Query: 119 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYP 253
P T WS AS+ RCP+TR S ST SS R AST P
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCP 63
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 26.6 bits (56), Expect(2) = 0.070
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 170 CPQTRPSGVETILSTLSSARPELASTYPGCLR 265
C RPS ++ ++ S RP+LA+ C R
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAANSATCWR 195
Score = 21.8 bits (44), Expect(2) = 0.070
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 113 VMPAGSFTAWSTASSLMARCPQTRPSGV 196
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 27.1 bits (57), Expect = 0.56
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 142 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 184
>AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 27.1 bits (57), Expect = 0.56
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 142 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 184
>AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.1 bits (57), Expect = 0.56
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.1 bits (57), Expect = 0.56
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.1 bits (57), Expect = 0.56
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.1 bits (57), Expect = 0.56
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 27.1 bits (57), Expect = 0.56
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 213 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 255
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 27.1 bits (57), Expect = 0.56
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 212 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 254
>EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein.
Length = 481
Score = 24.6 bits (51), Expect = 3.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 284 NSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLSVGI 168
+ R I D +GT + SL V ++PPP +++ +
Sbjct: 415 SQRTFISVDEQGTTAVSAASLAFVALSAAPPPPIINFAV 453
>AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 192 GWRRFFQHFLQRDRSWQAR 248
GW + HF QR R W R
Sbjct: 12 GWLWIYLHFNQRYRFWVER 30
>AF515521-1|AAM61888.1| 233|Anopheles gambiae glutathione
S-transferase u1 protein.
Length = 233
Score = 23.0 bits (47), Expect = 9.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 476 PLLRWRYRLWVTSLLMERLSVDYGKKSKL 562
P L R L ++ E +SVDYGK L
Sbjct: 11 PSLAVRMALEALNIPYEHVSVDYGKAEHL 39
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,594
Number of Sequences: 2352
Number of extensions: 16973
Number of successful extensions: 51
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -