Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20644
(689 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 167 5e-42
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 167 5e-42
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 167 5e-42
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 167 5e-42
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 167 8e-42
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 167 8e-42
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 163 1e-40
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 108 3e-24
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 107 9e-24
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 107 9e-24
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 107 9e-24
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 105 3e-23
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 104 5e-23
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 104 5e-23
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 104 6e-23
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 100 1e-21
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 71 6e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 71 7e-13
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.2
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.9
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 5.1
At5g59380.1 68418.m07441 methyl-CpG-binding domain-containing pr... 28 6.7
At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containi... 27 8.9
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 8.9
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 27 8.9
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 27 8.9
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 8.9
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 167 bits (407), Expect = 5e-42
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
LAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 142 bits (343), Expect = 3e-34
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/59 (72%), Positives = 54/59 (91%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAI
Sbjct: 151 SLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 167 bits (407), Expect = 5e-42
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
LAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 142 bits (343), Expect = 3e-34
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/59 (72%), Positives = 54/59 (91%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAI
Sbjct: 151 SLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 167 bits (407), Expect = 5e-42
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
LAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 143 bits (346), Expect = 1e-34
Identities = 57/64 (89%), Positives = 64/64 (100%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/59 (72%), Positives = 54/59 (91%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAI
Sbjct: 151 SLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 167 bits (407), Expect = 5e-42
Identities = 76/85 (89%), Positives = 82/85 (96%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
LAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 143 bits (346), Expect = 1e-34
Identities = 57/64 (89%), Positives = 64/64 (100%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
Score = 99.1 bits (236), Expect = 2e-21
Identities = 43/59 (72%), Positives = 54/59 (91%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAI
Sbjct: 151 SLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 167 bits (405), Expect = 8e-42
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
LAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 124 bits (300), Expect = 4e-29
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
Score = 101 bits (242), Expect = 4e-22
Identities = 46/59 (77%), Positives = 54/59 (91%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAI
Sbjct: 151 SLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAI 209
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 167 bits (405), Expect = 8e-42
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
LAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 124 bits (300), Expect = 4e-29
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
Score = 101 bits (242), Expect = 4e-22
Identities = 46/59 (77%), Positives = 54/59 (91%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAI
Sbjct: 151 SLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAI 209
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 163 bits (396), Expect = 1e-40
Identities = 74/101 (73%), Positives = 85/101 (84%)
Frame = +3
Query: 207 FQHFLQRDRSWQARTPAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 386
F F S Q AVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 387 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGL 509
T+G+EIVD L+R+RKLAD CTGLQGFL+F++ GGGTGSGL
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 119 bits (287), Expect = 2e-27
Identities = 47/64 (73%), Positives = 57/64 (89%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
SLL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNEAI
Sbjct: 151 SLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAI 209
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 108 bits (260), Expect = 3e-24
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
A+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/59 (38%), Positives = 42/59 (71%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 234
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 235 AGKHVPR 255
G++VPR
Sbjct: 56 CGRYVPR 62
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 107 bits (256), Expect = 9e-24
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/59 (38%), Positives = 42/59 (71%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 244 HVPR 255
VPR
Sbjct: 59 FVPR 62
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 107 bits (256), Expect = 9e-24
Identities = 46/85 (54%), Positives = 61/85 (71%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 57.6 bits (133), Expect = 7e-09
Identities = 22/59 (37%), Positives = 42/59 (71%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 149 TLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 244 HVPR 255
+VPR
Sbjct: 59 YVPR 62
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 107 bits (256), Expect = 9e-24
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 64 AVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 123
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
A+ C LQGF + HS GGGTGSG+
Sbjct: 124 EAENCDCLQGFQVCHSLGGGTGSGM 148
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/59 (38%), Positives = 42/59 (71%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 150 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 208
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 244 HVPR 255
+VPR
Sbjct: 60 YVPR 63
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 105 bits (252), Expect = 3e-23
Identities = 44/85 (51%), Positives = 61/85 (71%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 64 AVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 123
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
A+ C LQGF + HS GGGTGSG+
Sbjct: 124 EAENCDCLQGFQVCHSLGGGTGSGM 148
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/59 (38%), Positives = 42/59 (71%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 150 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 208
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 244 HVPR 255
+VPR
Sbjct: 60 YVPR 63
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 104 bits (250), Expect = 5e-23
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/59 (38%), Positives = 42/59 (71%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 244 HVPR 255
VPR
Sbjct: 59 FVPR 62
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 104 bits (250), Expect = 5e-23
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/59 (38%), Positives = 42/59 (71%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 244 HVPR 255
VPR
Sbjct: 59 FVPR 62
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 104 bits (249), Expect = 6e-23
Identities = 44/85 (51%), Positives = 61/85 (71%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
A+ C LQGF + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 57.6 bits (133), Expect = 7e-09
Identities = 22/59 (37%), Positives = 42/59 (71%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 149 TLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Score = 54.0 bits (124), Expect = 9e-08
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 244 HVPR 255
+VPR
Sbjct: 59 YVPR 62
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 100 bits (239), Expect = 1e-21
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGL 509
A+ LQGF + HS GGGTGSG+
Sbjct: 123 EAENSDCLQGFQVCHSLGGGTGSGM 147
Score = 57.6 bits (133), Expect = 7e-09
Identities = 22/59 (37%), Positives = 42/59 (71%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
+LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+
Sbjct: 149 TLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 244 HVPR 255
+VPR
Sbjct: 59 YVPR 62
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRI 428
A+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I
Sbjct: 64 ALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMI 122
Query: 429 RKLADQCTGLQGFLIFHSFGGGTGSGLLPY 518
+ AD L+GF++ HS GGTGSG+ Y
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +1
Query: 67 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 246
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 247 VPR 255
+PR
Sbjct: 61 IPR 63
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+
Sbjct: 151 SYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTAL 210
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.9 bits (166), Expect = 7e-13
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRI 428
A+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I
Sbjct: 64 ALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMI 122
Query: 429 RKLADQCTGLQGFLIFHSFGGGTGSGLLPY 518
+ AD L+GF++ HS GGTGSG+ Y
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +1
Query: 67 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 246
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 247 VPR 255
+PR
Sbjct: 61 IPR 63
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +2
Query: 512 SLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 688
S L+E L+ Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+
Sbjct: 151 SYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTAL 210
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 500 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 402
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 233 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 108
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 287 NNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPM 186
N R K S + L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At5g59380.1 68418.m07441 methyl-CpG-binding domain-containing
protein similar to testis specific methyl-CpG binding
protein MBD2 [Homo sapiens] GI:3800801; contains Pfam
profile PF01429: Methyl-CpG binding domain
Length = 225
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 505 PEPVPPPKEWKIRNPCRPVHWS 440
P P PPP ++ +NP V WS
Sbjct: 161 PPPPPPPLDFDFKNPPDKVSWS 182
>At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 823
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +2
Query: 500 LWVTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 679
L++ ++ L+ YGK +LE A+ Q+ P+N+++ H H + A M+
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 680 EAI 688
E +
Sbjct: 542 EML 544
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 8.9
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 432 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 343
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 676 VDHESTVRVLKGCVGGEDRVVGLDDGSGNLRRGVDG 569
+ H STVR K VGG +++ G +L G DG
Sbjct: 394 ISHISTVRTEKDSVGGLNQMEDASRGKLSLIEGADG 429
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -3
Query: 252 GYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDSG-LANV 85
G+ + SG + E + ++ D + H A DA+++ T +D G ANV
Sbjct: 754 GWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVGSAANV 813
Query: 84 YRDALTHF 61
YR LTHF
Sbjct: 814 YRIVLTHF 821
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 8.9
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 432 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 343
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,186,482
Number of Sequences: 28952
Number of extensions: 377461
Number of successful extensions: 1293
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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