Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20643
(530 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 163 5e-41
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 163 5e-41
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 163 5e-41
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 163 5e-41
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 163 9e-41
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 163 9e-41
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 159 1e-39
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 104 3e-23
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 103 1e-22
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 103 1e-22
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 103 1e-22
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 101 3e-22
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 100 5e-22
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 100 5e-22
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 100 7e-22
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 96 1e-20
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 67 6e-12
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 67 8e-12
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 1.5
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.0
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 3.4
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 6.0
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 27 6.0
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 6.0
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 7.9
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 7.9
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 7.9
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 7.9
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 7.9
At1g50240.1 68414.m05633 armadillo/beta-catenin repeat family pr... 27 7.9
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 163 bits (397), Expect = 5e-41
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
LAD CTGLQ FL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 142 bits (343), Expect = 2e-34
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 163 bits (397), Expect = 5e-41
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
LAD CTGLQ FL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 142 bits (343), Expect = 2e-34
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 163 bits (397), Expect = 5e-41
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
LAD CTGLQ FL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 143 bits (346), Expect = 8e-35
Identities = 57/64 (89%), Positives = 64/64 (100%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 163 bits (397), Expect = 5e-41
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
LAD CTGLQ FL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 143 bits (346), Expect = 8e-35
Identities = 57/64 (89%), Positives = 64/64 (100%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 163 bits (395), Expect = 9e-41
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
LAD CTGLQ FL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 124 bits (300), Expect = 3e-29
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 163 bits (395), Expect = 9e-41
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
LAD CTGLQ FL+F++ GGGTGSGL
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 124 bits (300), Expect = 3e-29
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 159 bits (386), Expect = 1e-39
Identities = 73/101 (72%), Positives = 84/101 (83%)
Frame = +3
Query: 207 FQHFLQRDRSWQARTPAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 386
F F S Q AVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 387 TIGKEIVDLVLDRIRKLADQCTGLQ*FLIFHSFGGGTGSGL 509
T+G+EIVD L+R+RKLAD CTGLQ FL+F++ GGGTGSGL
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGL 149
Score = 119 bits (287), Expect = 1e-27
Identities = 47/64 (73%), Positives = 57/64 (89%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 104 bits (250), Expect = 3e-23
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
A+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 122
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
A+ C LQ F + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 53.6 bits (123), Expect = 8e-08
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 234
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 235 AGKHVPR 255
G++VPR
Sbjct: 56 CGRYVPR 62
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 103 bits (246), Expect = 1e-22
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
A+ C LQ F + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 244 HVPR 255
VPR
Sbjct: 59 FVPR 62
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 103 bits (246), Expect = 1e-22
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
A+ C LQ F + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 244 HVPR 255
+VPR
Sbjct: 59 YVPR 62
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 103 bits (246), Expect = 1e-22
Identities = 44/85 (51%), Positives = 60/85 (70%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 64 AVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 123
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
A+ C LQ F + HS GGGTGSG+
Sbjct: 124 EAENCDCLQGFQVCHSLGGGTGSGM 148
Score = 53.6 bits (123), Expect = 8e-08
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 244 HVPR 255
+VPR
Sbjct: 60 YVPR 63
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 101 bits (242), Expect = 3e-22
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 64 AVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 123
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
A+ C LQ F + HS GGGTGSG+
Sbjct: 124 EAENCDCLQGFQVCHSLGGGTGSGM 148
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 244 HVPR 255
+VPR
Sbjct: 60 YVPR 63
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 100 bits (240), Expect = 5e-22
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
A+ C LQ F + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 244 HVPR 255
VPR
Sbjct: 59 FVPR 62
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 100 bits (240), Expect = 5e-22
Identities = 44/85 (51%), Positives = 59/85 (69%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
A+ C LQ F + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 54.4 bits (125), Expect = 5e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 244 HVPR 255
VPR
Sbjct: 59 FVPR 62
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 100 bits (239), Expect = 7e-22
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
A+ C LQ F + HS GGGTGSG+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGM 147
Score = 54.0 bits (124), Expect = 6e-08
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 244 HVPR 255
+VPR
Sbjct: 59 YVPR 62
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 96.3 bits (229), Expect = 1e-20
Identities = 42/85 (49%), Positives = 59/85 (69%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQ*FLIFHSFGGGTGSGL 509
A+ LQ F + HS GGGTGSG+
Sbjct: 123 EAENSDCLQGFQVCHSLGGGTGSGM 147
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 244 HVPR 255
+VPR
Sbjct: 59 YVPR 62
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 67.3 bits (157), Expect = 6e-12
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRI 428
A+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I
Sbjct: 64 ALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMI 122
Query: 429 RKLADQCTGLQ*FLIFHSFGGGTGSGLLPY 518
+ AD L+ F++ HS GGTGSG+ Y
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +1
Query: 67 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 246
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 247 VPR 255
+PR
Sbjct: 61 IPR 63
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 66.9 bits (156), Expect = 8e-12
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRI 428
A+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I
Sbjct: 64 ALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMI 122
Query: 429 RKLADQCTGLQ*FLIFHSFGGGTGSGLLPY 518
+ AD L+ F++ HS GGTGSG+ Y
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSY 152
Score = 52.0 bits (119), Expect = 2e-07
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +1
Query: 67 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 246
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 247 VPR 255
+PR
Sbjct: 61 IPR 63
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 500 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 402
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 233 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 108
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 287 NNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPM 186
N R K S + L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 6.0
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 432 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 343
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -3
Query: 252 GYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDSG-LANV 85
G+ + SG + E + ++ D + H A DA+++ T +D G ANV
Sbjct: 754 GWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVGSAANV 813
Query: 84 YRDALTHF 61
YR LTHF
Sbjct: 814 YRIVLTHF 821
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 6.0
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 432 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 343
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 228 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 58
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 228 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 58
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 228 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 58
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 228 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 58
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 175 WASGHQAGCRAPGSKAPSRHYRSGLR 98
W+SGHQ CR G + ++GLR
Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115
>At1g50240.1 68414.m05633 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 1021
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 299 ADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLSV 174
A ++ R +D S+G L P +KK+L +SSP ++L +
Sbjct: 749 AKMVGRPRLAVDLVSKG--LLDPNRMKKLLNQSSPREVILDI 788
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,945,442
Number of Sequences: 28952
Number of extensions: 294530
Number of successful extensions: 978
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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