BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20641
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for ... 60 1e-08
U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor ... 60 1e-08
CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein. 60 1e-08
BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport facto... 60 1e-08
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 46 2e-04
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 46 2e-04
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 46 2e-04
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 46 2e-04
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 46 2e-04
CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein. 44 5e-04
U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein p... 42 0.002
BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating p... 42 0.002
BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating prote... 42 0.002
BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating prote... 42 0.002
AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating p... 42 0.002
Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding p... 32 1.7
BC043152-1|AAH43152.3| 316|Homo sapiens zona pellucida binding ... 32 1.7
AY251604-1|AAP83951.1| 316|Homo sapiens zona pellucida binding ... 32 1.7
AY251603-1|AAP83950.1| 338|Homo sapiens zona pellucida binding ... 32 1.7
AK074499-1|BAC11024.1| 636|Homo sapiens protein ( Homo sapiens ... 32 1.7
AF054502-1|AAC39882.1| 669|Homo sapiens latent transforming gro... 32 1.7
AF051345-1|AAC39880.2| 1624|Homo sapiens latent transforming gro... 32 1.7
AF051344-1|AAC39879.2| 1557|Homo sapiens latent transforming gro... 32 1.7
>X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for
PP15 (placental protein 15). ).
Length = 127
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = +1
Query: 34 MALNPQYDAIAKGFVQQYYTLFDDPAQRANLVNMYNVETSFMTFEGVQLQGAVKIMEKLN 213
M P ++ I F+Q YY LFD+ R L +Y ++ S +T+EG Q QG I+EKL+
Sbjct: 1 MGDKPIWEQIGSSFIQHYYQLFDN--DRTQLGAIY-IDASCLTWEGQQFQGKAAIVEKLS 57
Query: 214 SLTFQKITRIVTA 252
SL FQKI +TA
Sbjct: 58 SLPFQKIQHSITA 70
Score = 50.0 bits (114), Expect = 8e-06
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +3
Query: 204 KIK*FDFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLGDSFYV 383
K+ F K + D QP D ++ V+G+LK DEDP + Q F+LK + D++
Sbjct: 55 KLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVC 114
Query: 384 QHDIFRLGIHD 416
+D+FRL +H+
Sbjct: 115 TNDMFRLALHN 125
>U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = +1
Query: 34 MALNPQYDAIAKGFVQQYYTLFDDPAQRANLVNMYNVETSFMTFEGVQLQGAVKIMEKLN 213
M P ++ I F+Q YY LFD+ R L +Y ++ S +T+EG Q QG I+EKL+
Sbjct: 1 MGDKPIWEQIGSSFIQHYYQLFDN--DRTQLGAIY-IDASCLTWEGQQFQGKAAIVEKLS 57
Query: 214 SLTFQKITRIVTA 252
SL FQKI +TA
Sbjct: 58 SLPFQKIQHSITA 70
Score = 50.0 bits (114), Expect = 8e-06
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +3
Query: 204 KIK*FDFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLGDSFYV 383
K+ F K + D QP D ++ V+G+LK DEDP + Q F+LK + D++
Sbjct: 55 KLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVC 114
Query: 384 QHDIFRLGIHD 416
+D+FRL +H+
Sbjct: 115 TNDMFRLALHN 125
>CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein.
Length = 127
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = +1
Query: 34 MALNPQYDAIAKGFVQQYYTLFDDPAQRANLVNMYNVETSFMTFEGVQLQGAVKIMEKLN 213
M P ++ I F+Q YY LFD+ R L +Y ++ S +T+EG Q QG I+EKL+
Sbjct: 1 MGDKPIWEQIGSSFIQHYYQLFDN--DRTQLGAIY-IDASCLTWEGQQFQGKAAIVEKLS 57
Query: 214 SLTFQKITRIVTA 252
SL FQKI +TA
Sbjct: 58 SLPFQKIQHSITA 70
Score = 50.0 bits (114), Expect = 8e-06
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +3
Query: 204 KIK*FDFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLGDSFYV 383
K+ F K + D QP D ++ V+G+LK DEDP + Q F+LK + D++
Sbjct: 55 KLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVC 114
Query: 384 QHDIFRLGIHD 416
+D+FRL +H+
Sbjct: 115 TNDMFRLALHN 125
>BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 59.7 bits (138), Expect = 1e-08
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = +1
Query: 34 MALNPQYDAIAKGFVQQYYTLFDDPAQRANLVNMYNVETSFMTFEGVQLQGAVKIMEKLN 213
M P ++ I F+Q YY LFD+ R L +Y ++ S +T+EG Q QG I+EKL+
Sbjct: 1 MGDKPIWEQIGSSFIQHYYQLFDN--DRTQLGAIY-IDASCLTWEGQQFQGKAAIVEKLS 57
Query: 214 SLTFQKITRIVTA 252
SL FQKI +TA
Sbjct: 58 SLPFQKIQHSITA 70
Score = 50.0 bits (114), Expect = 8e-06
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +3
Query: 204 KIK*FDFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLGDSFYV 383
K+ F K + D QP D ++ V+G+LK DEDP + Q F+LK + D++
Sbjct: 55 KLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVC 114
Query: 384 QHDIFRLGIHD 416
+D+FRL +H+
Sbjct: 115 TNDMFRLALHN 125
>BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 2 protein.
Length = 449
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 204 KIK*FDFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DS 374
K+ +FS+ H D+ GV++ V+G L P +MQTFVL P G +
Sbjct: 64 KVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNK 123
Query: 375 FYVQHDIFR 401
FYV +D+FR
Sbjct: 124 FYVHNDMFR 132
>AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein
isoform G3BP-2a protein.
Length = 482
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 204 KIK*FDFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DS 374
K+ +FS+ H D+ GV++ V+G L P +MQTFVL P G +
Sbjct: 64 KVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNK 123
Query: 375 FYVQHDIFR 401
FYV +D+FR
Sbjct: 124 FYVHNDMFR 132
>AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding
protein G3BP2 protein.
Length = 449
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 204 KIK*FDFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DS 374
K+ +FS+ H D+ GV++ V+G L P +MQTFVL P G +
Sbjct: 64 KVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNK 123
Query: 375 FYVQHDIFR 401
FYV +D+FR
Sbjct: 124 FYVHNDMFR 132
>AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding
protein protein.
Length = 449
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 204 KIK*FDFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DS 374
K+ +FS+ H D+ GV++ V+G L P +MQTFVL P G +
Sbjct: 64 KVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNK 123
Query: 375 FYVQHDIFR 401
FYV +D+FR
Sbjct: 124 FYVHNDMFR 132
>AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein.
Length = 490
Score = 45.6 bits (103), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 204 KIK*FDFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DS 374
K+ +FS+ H D+ GV++ V+G L P +MQTFVL P G +
Sbjct: 72 KVLSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNK 131
Query: 375 FYVQHDIFR 401
FYV +D+FR
Sbjct: 132 FYVHNDMFR 140
>CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein.
Length = 466
Score = 44.0 bits (99), Expect = 5e-04
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 219 DFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DSFYVQH 389
+F+ H D+ + GV++ V+G L D +MQTFVL P G + FYV +
Sbjct: 69 NFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNDNQALRRFMQTFVLAPEGSVANKFYVHN 128
Query: 390 DIFR 401
DIFR
Sbjct: 129 DIFR 132
>U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein
protein.
Length = 466
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 219 DFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DSFYVQH 389
+F+ H D+ + GV++ V+G L + +MQTFVL P G + FYV +
Sbjct: 69 NFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHN 128
Query: 390 DIFR 401
DIFR
Sbjct: 129 DIFR 132
>BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein protein.
Length = 466
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 219 DFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DSFYVQH 389
+F+ H D+ + GV++ V+G L + +MQTFVL P G + FYV +
Sbjct: 69 NFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHN 128
Query: 390 DIFR 401
DIFR
Sbjct: 129 DIFR 132
>BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 219 DFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DSFYVQH 389
+F+ H D+ + GV++ V+G L + +MQTFVL P G + FYV +
Sbjct: 69 NFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHN 128
Query: 390 DIFR 401
DIFR
Sbjct: 129 DIFR 132
>BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 219 DFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DSFYVQH 389
+F+ H D+ + GV++ V+G L + +MQTFVL P G + FYV +
Sbjct: 69 NFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHN 128
Query: 390 DIFR 401
DIFR
Sbjct: 129 DIFR 132
>AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein variant protein.
Length = 466
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 219 DFSKNH*NSNCCDSQPMFDGGVLINVLGRLKCDEDPPHLYMQTFVLKPLG---DSFYVQH 389
+F+ H D+ + GV++ V+G L + +MQTFVL P G + FYV +
Sbjct: 69 NFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHN 128
Query: 390 DIFR 401
DIFR
Sbjct: 129 DIFR 132
>Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding
protein-4 protein.
Length = 1587
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 240 NSNCCDSQPMFDGGVLINVLGRLKCDEDPP 329
N C D +P +GG +N +G C +PP
Sbjct: 1260 NDECADEEPACEGGRCVNTVGSYHCTCEPP 1289
>BC043152-1|AAH43152.3| 316|Homo sapiens zona pellucida binding
protein 2 protein.
Length = 316
Score = 32.3 bits (70), Expect = 1.7
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 234 DFLKSQTI*FFHNFNSTLQLYSLKGHE*SFNIVHINKICPLSRIIEQCVILLHKTFSDCI 55
DF +SQ F+HNFN TL H S +V ++ P E+ LH + C
Sbjct: 221 DFFRSQAYIFYHNFNKTLPAMHFVDH--SLQVVRLDSCRPGFGKNER----LHSNCASCC 274
Query: 54 VLRIERHLD*DVSI-CHT 4
V+ DV++ C T
Sbjct: 275 VVCSPATFSPDVNVTCQT 292
>AY251604-1|AAP83951.1| 316|Homo sapiens zona pellucida binding
protein 2 protein.
Length = 316
Score = 32.3 bits (70), Expect = 1.7
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 234 DFLKSQTI*FFHNFNSTLQLYSLKGHE*SFNIVHINKICPLSRIIEQCVILLHKTFSDCI 55
DF +SQ F+HNFN TL H S +V ++ P E+ LH + C
Sbjct: 221 DFFRSQAYIFYHNFNKTLPAMHFVDH--SLQVVRLDSCRPGFGKNER----LHSNCASCC 274
Query: 54 VLRIERHLD*DVSI-CHT 4
V+ DV++ C T
Sbjct: 275 VVCSPATFSPDVNVTCQT 292
>AY251603-1|AAP83950.1| 338|Homo sapiens zona pellucida binding
protein 2 protein.
Length = 338
Score = 32.3 bits (70), Expect = 1.7
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -3
Query: 234 DFLKSQTI*FFHNFNSTLQLYSLKGHE*SFNIVHINKICPLSRIIEQCVILLHKTFSDCI 55
DF +SQ F+HNFN TL H S +V ++ P E+ LH + C
Sbjct: 243 DFFRSQAYIFYHNFNKTLPAMHFVDH--SLQVVRLDSCRPGFGKNER----LHSNCASCC 296
Query: 54 VLRIERHLD*DVSI-CHT 4
V+ DV++ C T
Sbjct: 297 VVCSPATFSPDVNVTCQT 314
>AK074499-1|BAC11024.1| 636|Homo sapiens protein ( Homo sapiens
cDNA FLJ90018 fis, clone HEMBA1000732, highly similar to
Homo sapiens mRNA for latent transforming growth
factor-beta ).
Length = 636
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 240 NSNCCDSQPMFDGGVLINVLGRLKCDEDPP 329
N C D +P +GG +N +G C +PP
Sbjct: 309 NDECADEEPACEGGRCVNTVGSYHCTCEPP 338
>AF054502-1|AAC39882.1| 669|Homo sapiens latent transforming growth
factor-beta binding protein 4 protein.
Length = 669
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 240 NSNCCDSQPMFDGGVLINVLGRLKCDEDPP 329
N C D +P +GG +N +G C +PP
Sbjct: 434 NDECADEEPACEGGRCVNTVGSYHCTCEPP 463
>AF051345-1|AAC39880.2| 1624|Homo sapiens latent transforming growth
factor-beta binding protein 4L protein.
Length = 1624
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 240 NSNCCDSQPMFDGGVLINVLGRLKCDEDPP 329
N C D +P +GG +N +G C +PP
Sbjct: 1297 NDECADEEPACEGGRCVNTVGSYHCTCEPP 1326
>AF051344-1|AAC39879.2| 1557|Homo sapiens latent transforming growth
factor-beta binding protein 4S protein.
Length = 1557
Score = 32.3 bits (70), Expect = 1.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 240 NSNCCDSQPMFDGGVLINVLGRLKCDEDPP 329
N C D +P +GG +N +G C +PP
Sbjct: 1230 NDECADEEPACEGGRCVNTVGSYHCTCEPP 1259
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,111,979
Number of Sequences: 237096
Number of extensions: 1983888
Number of successful extensions: 3055
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3045
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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