Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20640
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.78 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.78 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.78 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.78 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.78 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   0.78 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   0.78 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   5.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   5.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.6  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 274 KPFSNEGKPLVVQFTVKHEQDID 342
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 274 KPFSNEGKPLVVQFTVKHEQDID 342
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 274 KPFSNEGKPLVVQFTVKHEQDID 342
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 274 KPFSNEGKPLVVQFTVKHEQDID 342
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 274 KPFSNEGKPLVVQFTVKHEQDID 342
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 167 FGKFKLTAGKFFSDPEDDKGLKTSEDARFLL 259
           FGK   T   FFSD + D  +    D  ++L
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISDNLYIL 233


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 0.78
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 167 FGKFKLTAGKFFSDPEDDKGLKTSEDARFLL 259
           FGK   T   FFSD + D  +    D  ++L
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISDNLYIL 233


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 333 LFMFDSELDYQGFTLITERFELTGESKNLASS 238
           + +  + L Y+ FT +T+R +   ESKN + S
Sbjct: 234 VMLLSTALAYR-FTQVTDRTQSMSESKNKSES 264


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 333 LFMFDSELDYQGFTLITERFELTGESKNLASS 238
           + +  + L Y+ FT +T+R +   ESKN + S
Sbjct: 234 VMLLSTALAYR-FTQVTDRTQSMSESKNKSES 264


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 333 LFMFDSELDYQGFTLITERFELTGESKNLASS 238
           + +  + L Y+ FT +T+R +   ESKN + S
Sbjct: 234 VMLLSTALAYR-FTQVTDRTQSMSESKNKSES 264


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 131 FPTNHQETSPQRIH 90
           FP NH    P+++H
Sbjct: 41  FPLNHLNEEPEKLH 54


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 218 HPLGR*RTFQQSI*TFQILFLGAHCTPNCFPTN 120
           +P+G       S+  F ++FL   CT  C   N
Sbjct: 133 YPVGIVGVKNASLFIFDLIFLSFRCTKLCKEAN 165


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 564 QVSQSECTNVCRHHLCSGYFFDEMVLTL 481
           Q  Q  C N+  ++   GY F  ++ +L
Sbjct: 34  QKGQKTCLNLSINYCICGYIFSAILFSL 61


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -1

Query: 136 IAFPRIIRKLLLKEYITIYRR*CQQADNDQYNSFHFRF 23
           I  P I+RK+L+K++     R     ++    +FH  F
Sbjct: 79  IRSPEILRKVLVKDFDKFTNRNIATNESADPLAFHTLF 116


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 321 DSELDYQGFTLITERFELTGESKN 250
           +++L+Y G T+     +  G SKN
Sbjct: 422 ENQLNYPGITVSNIEVQSQGSSKN 445


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 356 YPPPQSMSCSCLTVNWTTKGLP 291
           YPPP S+    ++V   T G P
Sbjct: 213 YPPPGSLGSMGVSVPCGTSGNP 234


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 67  QQADNDQYNSFH 32
           Q   +D YNSFH
Sbjct: 470 QTESSDNYNSFH 481


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +2

Query: 104 EKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFF 202
           EKFP+ S E   +Y      E      TA  FF
Sbjct: 314 EKFPERSHEQQELYMAAQVIEKSVANFTAAGFF 346


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 67  QQADNDQYNSFH 32
           Q   +D YNSFH
Sbjct: 418 QTESSDNYNSFH 429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,780
Number of Sequences: 336
Number of extensions: 3511
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)