Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20640
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 125 3e-29
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 125 3e-29
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 67 9e-12
Z66500-8|CAE17939.1| 312|Caenorhabditis elegans Hypothetical pr... 28 4.0
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 28 4.0
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 28 5.3
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 28 5.3
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 28 5.3
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 28 5.3
Z81526-1|CAB04264.1| 816|Caenorhabditis elegans Hypothetical pr... 27 9.3
U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical pr... 27 9.3
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 125 bits (301), Expect = 3e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +1
Query: 274 KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGT 453
K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPDICGP T
Sbjct: 78 KDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP-T 136
Query: 454 KKVHVIFSYKGKNHLIKKVSAAKMMS-THICTL 549
++VHVI +YKG+N LIKK K TH+ TL
Sbjct: 137 RRVHVILNYKGENKLIKKEITCKSDELTHLYTL 169
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +2
Query: 80 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARF 253
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+F
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKF 69
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 501 QKSIRCKDDVYTHLYTLIV 557
+K I CK D THLYTLI+
Sbjct: 153 KKEITCKSDELTHLYTLIL 171
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 125 bits (301), Expect = 3e-29
Identities = 58/93 (62%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +1
Query: 274 KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGT 453
K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPDICGP T
Sbjct: 78 KDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPDICGP-T 136
Query: 454 KKVHVIFSYKGKNHLIKKVSAAKMMS-THICTL 549
++VHVI +YKG+N LIKK K TH+ TL
Sbjct: 137 RRVHVILNYKGENKLIKKEITCKSDELTHLYTL 169
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +2
Query: 80 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARF 253
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+F
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKF 69
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 501 QKSIRCKDDVYTHLYTLIV 557
+K I CK D THLYTLI+
Sbjct: 153 KKEITCKSDELTHLYTLIL 171
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 66.9 bits (156), Expect = 9e-12
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 277 PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKLEQKDMHGETPYEIMFGPDICGPG 450
PF+ + VVQ+ +K E+ +CGGGYLK+ + + + +T Y IMFGPD CG
Sbjct: 130 PFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDLANFQDKTAYTIMFGPDKCG-A 188
Query: 451 TKKVHVIFSYK 483
T KVH+IF YK
Sbjct: 189 TGKVHLIFRYK 199
>Z66500-8|CAE17939.1| 312|Caenorhabditis elegans Hypothetical
protein T05C12.11 protein.
Length = 312
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -2
Query: 360 EVSASTVNVLFMFDSELDYQGFTLITERFELTGESKNLASSEVFKPLSSSGSLKNFPAVN 181
+V+ + LF+ +S+LD +T ++ RF + +S EVF SSS L P+ +
Sbjct: 166 KVACCLIRALFLNNSDLD--AYTSVSTRFFTSSKSSYKRILEVFGSTSSSLVLTTTPSTS 223
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -2
Query: 282 ERFELTGESKNLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQ 136
E +T S L + V +S L + ++ +F SFP C LYT+
Sbjct: 349 ENDSITEMSVQLTTYGVNPAISMDRRLSRYSRISCSFHFSFPSCLLYTK 397
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = -2
Query: 288 ITERFELTGE---SKNLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHES 118
ITE ++ GE ++A + + + GS K PAV N NS+ Q+ HE
Sbjct: 227 ITEFMKVGGEVASGNSVARCLLTEYHQNQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEM 286
Query: 117 SGNFSSKNTSQFIEDNASKLTTTSTTAFIFDS 22
++ T +N T T + DS
Sbjct: 287 QNSYWGVATPSLGVNNRGTPTPTQQQHYSSDS 318
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = -2
Query: 288 ITERFELTGE---SKNLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHES 118
ITE ++ GE ++A + + + GS K PAV N NS+ Q+ HE
Sbjct: 294 ITEFMKVGGEVASGNSVARCLLTEYHQNQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEM 353
Query: 117 SGNFSSKNTSQFIEDNASKLTTTSTTAFIFDS 22
++ T +N T T + DS
Sbjct: 354 QNSYWGVATPSLGVNNRGTPTPTQQQHYSSDS 385
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = -2
Query: 288 ITERFELTGE---SKNLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHES 118
ITE ++ GE ++A + + + GS K PAV N NS+ Q+ HE
Sbjct: 294 ITEFMKVGGEVASGNSVARCLLTEYHQNQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEM 353
Query: 117 SGNFSSKNTSQFIEDNASKLTTTSTTAFIFDS 22
++ T +N T T + DS
Sbjct: 354 QNSYWGVATPSLGVNNRGTPTPTQQQHYSSDS 385
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = -2
Query: 288 ITERFELTGE---SKNLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHES 118
ITE ++ GE ++A + + + GS K PAV N NS+ Q+ HE
Sbjct: 294 ITEFMKVGGEVASGNSVARCLLTEYHQNQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEM 353
Query: 117 SGNFSSKNTSQFIEDNASKLTTTSTTAFIFDS 22
++ T +N T T + DS
Sbjct: 354 QNSYWGVATPSLGVNNRGTPTPTQQQHYSSDS 385
>Z81526-1|CAB04264.1| 816|Caenorhabditis elegans Hypothetical
protein F33H2.2 protein.
Length = 816
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 126 HESSGNFSSKNTSQFIEDNASKLTTTSTTAFIFDS 22
+ S +F S +TSQ D + T + AFIFDS
Sbjct: 376 NNSVESFQSLSTSQTASDLSGSSGTVNRAAFIFDS 410
>U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical
protein T19H12.6 protein.
Length = 619
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 349 GGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGT 453
GGY+ D + + DM EI +CGPG+
Sbjct: 415 GGYMTASDLEDYESDMSSAICSEIDVDTKVCGPGS 449
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,204,293
Number of Sequences: 27780
Number of extensions: 318451
Number of successful extensions: 994
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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