Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20639
(683 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 139 4e-33
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 139 4e-33
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 139 4e-33
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 139 4e-33
AY122170-1|AAM52682.1| 1517|Drosophila melanogaster LD28815p pro... 29 4.5
AE014296-151|AAF47426.2| 1517|Drosophila melanogaster CG32479-PA... 29 4.5
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 29 7.8
AE013599-2140|AAF58091.1| 514|Drosophila melanogaster CG8302-PA... 29 7.8
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 29 7.8
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 29 7.8
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 139 bits (336), Expect = 4e-33
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +2
Query: 254 LDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 433
+DV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRT
Sbjct: 87 MDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRT 146
Query: 434 IRYPDPLIKVNDSIQLDIATTKIMD 508
IRYPDPLI NDS+Q+DIA+ KI D
Sbjct: 147 IRYPDPLIHANDSVQVDIASGKITD 171
Score = 115 bits (276), Expect = 7e-26
Identities = 53/63 (84%), Positives = 56/63 (88%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNES 180
ARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E
Sbjct: 2 ARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEV 61
Query: 181 *KL 189
K+
Sbjct: 62 TKI 64
Score = 114 bits (275), Expect = 9e-26
Identities = 51/57 (89%), Positives = 54/57 (94%)
Frame = +1
Query: 511 IKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 681
IKF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIG
Sbjct: 173 IKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIG 229
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3
Query: 177 ILKIVKQRLIKVDGKVRTDPTYPAGF 254
+ KIV QRL+KV GKVRTDPTYPAG+
Sbjct: 61 VTKIVMQRLVKVYGKVRTDPTYPAGY 86
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 139 bits (336), Expect = 4e-33
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +2
Query: 254 LDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 433
+DV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRT
Sbjct: 87 MDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRT 146
Query: 434 IRYPDPLIKVNDSIQLDIATTKIMD 508
IRYPDPLI NDS+Q+DIA+ KI D
Sbjct: 147 IRYPDPLIHANDSVQVDIASGKITD 171
Score = 117 bits (281), Expect = 2e-26
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNES 180
ARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 2 ARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEV 61
Query: 181 *KL 189
K+
Sbjct: 62 TKI 64
Score = 114 bits (275), Expect = 9e-26
Identities = 51/57 (89%), Positives = 54/57 (94%)
Frame = +1
Query: 511 IKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 681
IKF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIG
Sbjct: 173 IKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIG 229
Score = 50.8 bits (116), Expect = 2e-06
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 177 ILKIVKQRLIKVDGKVRTDPTYPAGF 254
+ KIV QRL+KVDGKVRTDPTYPAG+
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGY 86
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 139 bits (336), Expect = 4e-33
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +2
Query: 254 LDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 433
+DV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRT
Sbjct: 87 MDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRT 146
Query: 434 IRYPDPLIKVNDSIQLDIATTKIMD 508
IRYPDPLI NDS+Q+DIA+ KI D
Sbjct: 147 IRYPDPLIHANDSVQVDIASGKITD 171
Score = 117 bits (281), Expect = 2e-26
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNES 180
ARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 2 ARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEV 61
Query: 181 *KL 189
K+
Sbjct: 62 TKI 64
Score = 114 bits (275), Expect = 9e-26
Identities = 51/57 (89%), Positives = 54/57 (94%)
Frame = +1
Query: 511 IKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 681
IKF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIG
Sbjct: 173 IKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIG 229
Score = 50.8 bits (116), Expect = 2e-06
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 177 ILKIVKQRLIKVDGKVRTDPTYPAGF 254
+ KIV QRL+KVDGKVRTDPTYPAG+
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGY 86
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 139 bits (336), Expect = 4e-33
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +2
Query: 254 LDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRT 433
+DV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRT
Sbjct: 87 MDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRT 146
Query: 434 IRYPDPLIKVNDSIQLDIATTKIMD 508
IRYPDPLI NDS+Q+DIA+ KI D
Sbjct: 147 IRYPDPLIHANDSVQVDIASGKITD 171
Score = 117 bits (281), Expect = 2e-26
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +1
Query: 1 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNES 180
ARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 2 ARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEV 61
Query: 181 *KL 189
K+
Sbjct: 62 TKI 64
Score = 114 bits (275), Expect = 9e-26
Identities = 51/57 (89%), Positives = 54/57 (94%)
Frame = +1
Query: 511 IKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIG 681
IKF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIG
Sbjct: 173 IKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIG 229
Score = 50.8 bits (116), Expect = 2e-06
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 177 ILKIVKQRLIKVDGKVRTDPTYPAGF 254
+ KIV QRL+KVDGKVRTDPTYPAG+
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGY 86
>AY122170-1|AAM52682.1| 1517|Drosophila melanogaster LD28815p
protein.
Length = 1517
Score = 29.5 bits (63), Expect = 4.5
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -1
Query: 296 DETVH*SSQLRQHPKSSRISRVSPNFPINLYEALFHNFQDSFPVKAYF 153
DE H SS L P S S +SPN+PI Y+ H Q V F
Sbjct: 387 DELNHNSSSL---PSSETSSMISPNYPI--YDPQMHEMQHQMGVMQIF 429
>AE014296-151|AAF47426.2| 1517|Drosophila melanogaster CG32479-PA
protein.
Length = 1517
Score = 29.5 bits (63), Expect = 4.5
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -1
Query: 296 DETVH*SSQLRQHPKSSRISRVSPNFPINLYEALFHNFQDSFPVKAYF 153
DE H SS L P S S +SPN+PI Y+ H Q V F
Sbjct: 387 DELNHNSSSL---PSSETSSMISPNYPI--YDPQMHEMQHQMGVMQIF 429
>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 433 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 275
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-2140|AAF58091.1| 514|Drosophila melanogaster CG8302-PA
protein.
Length = 514
Score = 28.7 bits (61), Expect = 7.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +1
Query: 433 HPLPRPT-YQSQRFHPVRHRNYEDYGLIKFESGNLCMITGGRNLGRVGTIVSR 588
H P P +Q +RF P N Y + F +G I + + TIVSR
Sbjct: 418 HIYPDPEKFQPERFSPENSENRHPYAFLPFSAGPRYCIGNRFAIMEIKTIVSR 470
>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
isoform F protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 433 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 275
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
isoform E protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -2
Query: 433 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 275
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,494,720
Number of Sequences: 53049
Number of extensions: 826070
Number of successful extensions: 2528
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2528
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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