Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20636
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 115 4e-26
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 80 2e-15
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 80 2e-15
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 75 7e-14
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 75 7e-14
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 68 6e-12
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 57 1e-08
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 56 2e-08
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 56 2e-08
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 56 2e-08
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 44 1e-04
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 43 2e-04
U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arre... 42 3e-04
D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C prot... 42 3e-04
D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C prot... 42 3e-04
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 38 0.005
AC024205-5|ABA00164.1| 97|Caenorhabditis elegans Hypothetical ... 38 0.007
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 36 0.021
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 36 0.028
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 35 0.049
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 33 0.15
AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical ... 32 0.35
Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical pr... 32 0.46
AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein. 32 0.46
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 31 0.60
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 31 0.60
U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light c... 31 0.60
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 28 5.6
L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical pr... 28 7.4
U80027-18|AAC48115.1| 198|Caenorhabditis elegans Hypothetical p... 27 9.8
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF047655-8|AAC04397.1| 227|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 115 bits (276), Expect = 4e-26
Identities = 49/88 (55%), Positives = 70/88 (79%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFDKD 424
+++LGQNPTE+++ KC + R+SFE F+PI+Q++SK R T +F+EGL HFDK+
Sbjct: 31 LRALGQNPTEAEIHKCVGSFDREARLSFEDFVPIFQSVSKNREKHTVEEFVEGLSHFDKE 90
Query: 425 GNGFISSAELRHLLSTLGEKLSDDEVEQ 508
GNG I+ AELRHLL+TLGE+LSD++V+Q
Sbjct: 91 GNGMINVAELRHLLTTLGERLSDEDVDQ 118
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +3
Query: 159 DQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
D LA+ +E F FDS+GD +I V Q+GD LRA
Sbjct: 2 DDLADCREVFAYFDSKGDERISVQQVGDVLRA 33
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFDKD 424
++SL +NP SDV +C RISFE FLP+ + + + DFI+GL HFDK+
Sbjct: 34 LRSLDENPKNSDVHQCLAKFDKTARISFENFLPVLSHVRNNKIPYSMEDFIKGLSHFDKE 93
Query: 425 GNGFISSAELRHLLSTLGEKLSDDEVEQ 508
G GFI+SAELR +L+T+G+KLSD+E ++
Sbjct: 94 GEGFITSAELRQVLTTMGDKLSDEEFDK 121
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 159 DQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA*DK 263
D + E +E F LFD +GDGKI AQ+ + LR+ D+
Sbjct: 5 DNMEECREVFMLFDKKGDGKIDAAQVFEVLRSLDE 39
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 79.8 bits (188), Expect = 2e-15
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDFIEGLRHFD 418
++SLGQNPTE++++ + D I F FL + K + D+ + E R FD
Sbjct: 37 MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR--KMKDTDSEEEIREAFRVFD 94
Query: 419 KDGNGFISSAELRHLLSTLGEKLSDDEVEQSCRD 520
KDGNGFIS+AELRH+++ LGEKL+D+EV++ R+
Sbjct: 95 KDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 153 SEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
+E+Q+AEF+EAF LFD GDG I ++G +R+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 39
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +2
Query: 389 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVE 505
+F E FDKDG+G I++ EL ++ +LG+ ++ E++
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ 50
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 79.8 bits (188), Expect = 2e-15
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDFIEGLRHFD 418
++SLGQNPTE++++ + D I F FL + K + D+ + E R FD
Sbjct: 37 MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR--KMKDTDSEEEIREAFRVFD 94
Query: 419 KDGNGFISSAELRHLLSTLGEKLSDDEVEQSCRD 520
KDGNGFIS+AELRH+++ LGEKL+D+EV++ R+
Sbjct: 95 KDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 128
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 153 SEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
+E+Q+AEF+EAF LFD GDG I ++G +R+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS 39
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +2
Query: 389 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVE 505
+F E FDKDG+G I++ EL ++ +LG+ ++ E++
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ 50
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 74.5 bits (175), Expect = 7e-14
Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Frame = +2
Query: 248 KSLGQNPTESDVKKCT---LHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFD 418
++ G PT++ V K K ++R++FE +LP+Y+ ++K + T DF EGL+ FD
Sbjct: 34 RAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQLAKEKEQGTYADFYEGLKVFD 93
Query: 419 KDGNGFISSAELRHLLSTLGEKLSDDEVEQ 508
K+ G I +AELRH+L LGE+LS DE ++
Sbjct: 94 KEETGKILAAELRHILLALGERLSADEADE 123
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 141 MAGYSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
MA S+D L +E F L+D DGKI Q+GD RA
Sbjct: 1 MAPPSQDVL---KEIFNLYDEELDGKIDGTQVGDVARA 35
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 74.5 bits (175), Expect = 7e-14
Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Frame = +2
Query: 248 KSLGQNPTESDVKKCT---LHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFD 418
++ G PT++ V K K ++R++FE +LP+Y+ ++K + T DF EGL+ FD
Sbjct: 34 RAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQLAKEKEQGTYADFYEGLKVFD 93
Query: 419 KDGNGFISSAELRHLLSTLGEKLSDDEVEQ 508
K+ G I +AELRH+L LGE+LS DE ++
Sbjct: 94 KEETGKILAAELRHILLALGERLSADEADE 123
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 141 MAGYSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
MA S+D L +E F L+D DGKI Q+GD RA
Sbjct: 1 MAPPSQDVL---KEIFNLYDEELDGKIDGTQVGDVARA 35
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 68.1 bits (159), Expect = 6e-12
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +2
Query: 320 ISFEVFLPIYQAISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDE 499
I F FL + K + D+ + E R FDKDGNGFIS+AELRH+++ LGEKL+D+E
Sbjct: 13 IDFPEFLTVMAR--KMKGTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 70
Query: 500 VEQSCRDKKTLREISTMRTLFT 565
V++ R+ + MR F+
Sbjct: 71 VDEMIREADIDGDGQIMRVSFS 92
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDFIEGLRHFD 418
++SLGQNPTE ++ + D I F F + + ++K + E R FD
Sbjct: 61 MRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMKRMNKENDSEMIR---EAFRVFD 117
Query: 419 KDGNGFISSAELRHLLSTLGEKLSDDEVEQ 508
+DGNGFI++ E R+ ++ +G++ SD EV++
Sbjct: 118 RDGNGFITADEFRYFMTHMGDQFSDQEVDE 147
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +3
Query: 147 GYSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
G +E+++ E++ AF+LFD G+G I ++G A+R+
Sbjct: 28 GLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRS 63
Score = 34.7 bits (76), Expect = 0.065
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 389 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEV 502
++ R FDKDGNG ISS EL + +LG+ ++ E+
Sbjct: 36 EYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQEL 73
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDFIEGLRHFD 418
++SLGQNPTE ++ + D I F F + + ++K + E R FD
Sbjct: 61 MRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMMKRMNKENDSEMIR---EAFRVFD 117
Query: 419 KDGNGFISSAELRHLLSTLGEKLSDDEVEQ 508
+DGNGFI++ E R+ ++ +G++ SD EV++
Sbjct: 118 RDGNGFITADEFRYFMTHMGDQFSDQEVDE 147
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +3
Query: 147 GYSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
G +E+++ E++ AF+LFD G+G I ++G A+R+
Sbjct: 28 GLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRS 63
Score = 34.7 bits (76), Expect = 0.065
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 389 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEV 502
++ R FDKDGNG ISS EL + +LG+ ++ E+
Sbjct: 36 EYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQEL 73
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDE--RISFEVFLPIYQAISKARSGDTANDFIE-GLRHF 415
++ LG NPTE ++ D +I F F + + ++K +T + I + F
Sbjct: 49 MRMLGLNPTEEELLNMVNEYDVDGNGKIDFGEFCKMMKEMNK----ETDQELIRLAFKVF 104
Query: 416 DKDGNGFISSAELRHLLSTLGEKLSDDEVEQSCRD 520
DKDGNG+I++ E +H ++T+GE+ S++EV++ R+
Sbjct: 105 DKDGNGYITAQEFKHFMTTMGERFSEEEVDEIIRE 139
Score = 36.3 bits (80), Expect = 0.021
Identities = 12/34 (35%), Positives = 26/34 (76%)
Frame = +3
Query: 150 YSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALR 251
++ ++L EF +AF+LFD G+ +++ ++G+A+R
Sbjct: 17 FTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMR 50
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 389 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEV 502
+F + + FDKDGN ++ EL + LG +++E+
Sbjct: 24 EFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEEL 61
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTA-NDFIEGLRHFDK 421
++++ NPTE+ + + + RI+ E F+PIY+ + A T +F L HFD+
Sbjct: 34 LRAMMLNPTEALLAEVSKARTSGARITVEEFIPIYKKVEAACGRSTTLKEFQTLLSHFDR 93
Query: 422 DGNGFISSAELRHLLSTLGEKLSDDEVE 505
+GNG I EL+ +L GEK+++ EV+
Sbjct: 94 EGNGQIMLMELKSMLQNGGEKMTNQEVD 121
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 171 EFQEAFQLFDSRGDGKIHVAQIGDALRA 254
E + F D+ GDGKI Q+ ALRA
Sbjct: 9 EVHDVFHFHDTLGDGKIDSKQLPTALRA 36
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 165 LAEFQEAFQLFDSRGDGKIHVAQIGDALRA*DKILQSQM*KNVLFILNLMKG 320
L EFQ FD G+G+I + ++ L+ + + +Q N+LF + ++ G
Sbjct: 81 LKEFQTLLSHFDREGNGQIMLMELKSMLQNGGEKMTNQEVDNLLFGVEVVDG 132
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFI-EGLRHFDK 421
++SLGQNPTE ++ + + D E P + + K +T ++ I E R FDK
Sbjct: 107 MRSLGQNPTEQEILEMINEVDIDGNGQIE--FPEFCVMMKRMMKETDSEMIREAFRVFDK 164
Query: 422 DGNGFISSAELRHLLSTLGEKLSDDEVEQSCRD 520
DGNG I++ E R+ + +G + S++EV++ ++
Sbjct: 165 DGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKE 197
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 356 ISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEV 502
I K + + ++F E FDKDGNG IS+ EL + +LG+ ++ E+
Sbjct: 71 IIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEI 119
Score = 34.7 bits (76), Expect = 0.065
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 159 DQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
+++ EF+EAF +FD G+G I ++G A+R+
Sbjct: 78 EEIDEFREAFMMFDKDGNGTISTKELGIAMRS 109
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFI-EGLRHFDK 421
++SLGQNPTE ++ + + D E P + + K +T ++ I E R FDK
Sbjct: 50 MRSLGQNPTEQEILEMINEVDIDGNGQIE--FPEFCVMMKRMMKETDSEMIREAFRVFDK 107
Query: 422 DGNGFISSAELRHLLSTLGEKLSDDEVEQSCRD 520
DGNG I++ E R+ + +G + S++EV++ ++
Sbjct: 108 DGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKE 140
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 356 ISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEV 502
I K + + ++F E FDKDGNG IS+ EL + +LG+ ++ E+
Sbjct: 14 IIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEI 62
Score = 34.7 bits (76), Expect = 0.065
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 159 DQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
+++ EF+EAF +FD G+G I ++G A+R+
Sbjct: 21 EEIDEFREAFMMFDKDGNGTISTKELGIAMRS 52
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/90 (28%), Positives = 46/90 (51%)
Frame = +2
Query: 251 SLGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFDKDGN 430
SLG+ TE + + I+F +FL ++ K D + FD+D +
Sbjct: 58 SLGKEVTEQFIDSMINEAPGAQPINFTMFLTLFG--EKLTGTDPEEVIRNAFQCFDEDNS 115
Query: 431 GFISSAELRHLLSTLGEKLSDDEVEQSCRD 520
G ++ LR LL+T+GE+ S+++V++ RD
Sbjct: 116 GKLNEEHLRELLTTMGERYSEEQVDELFRD 145
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 144 AGYSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA*DKILQSQ 278
A + + Q+ EF+EAF + D DG I + D + K + Q
Sbjct: 22 AMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEVTEQ 66
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/90 (28%), Positives = 46/90 (51%)
Frame = +2
Query: 251 SLGQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFDKDGN 430
SLG+ TE + + I+F +FL ++ K D + FD+D +
Sbjct: 58 SLGKEVTEQFIDSMINEAPGAQPINFTMFLTLFG--EKLTGTDPEEVIRNAFQCFDEDNS 115
Query: 431 GFISSAELRHLLSTLGEKLSDDEVEQSCRD 520
G ++ LR LL+T+GE+ S+++V++ RD
Sbjct: 116 GKLNEEHLRELLTTMGERYSEEQVDELFRD 145
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 144 AGYSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA*DKILQSQ 278
A + + Q+ EF+EAF + D DG I + D + K + Q
Sbjct: 22 AMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEVTEQ 66
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDE--RISFEVFLPIYQ--AISKARSGDTANDFIEGLRH 412
++++GQ E D+K+ D I FE F + ++ + E R
Sbjct: 44 LRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVANFVVNNENDEGLEEELREAFRL 103
Query: 413 FDKDGNGFISSAELRHLLSTLGEKLSDDEVEQ 508
+DK+GNG+I+ ++LR +L L + +S++E+++
Sbjct: 104 YDKEGNGYINVSDLRDILRALDDNVSEEELDE 135
Score = 35.5 bits (78), Expect = 0.037
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 153 SEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALR 251
S DQ+ +F++ F +FD G G I Q+G LR
Sbjct: 13 SADQIEQFRKYFNMFDKEGKGYIRATQVGQILR 45
Score = 34.7 bits (76), Expect = 0.065
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 171 EFQEAFQLFDSRGDGKIHVAQIGDALRA*D 260
E +EAF+L+D G+G I+V+ + D LRA D
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRDILRALD 125
Score = 34.3 bits (75), Expect = 0.086
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +2
Query: 371 SGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQSCRD 520
S D F + FDK+G G+I + ++ +L T+G+ + +++Q ++
Sbjct: 13 SADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKE 62
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCTLHLKPDE--RISFEVFLPIYQ--AISKARSGDTANDFIEGLRH 412
++++GQ E D+K+ D I FE F + ++ + E R
Sbjct: 44 LRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVANFVVNNENDEGLEEELREAFRL 103
Query: 413 FDKDGNGFISSAELRHLLSTLGEKLSDDEVEQ 508
+DK+GNG+I+ ++LR +L L + +S++E+++
Sbjct: 104 YDKEGNGYINVSDLRDILRALDDNVSEEELDE 135
Score = 35.5 bits (78), Expect = 0.037
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 153 SEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALR 251
S DQ+ +F++ F +FD G G I Q+G LR
Sbjct: 13 SADQIEQFRKYFNMFDKEGKGYIRATQVGQILR 45
Score = 34.7 bits (76), Expect = 0.065
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 171 EFQEAFQLFDSRGDGKIHVAQIGDALRA*D 260
E +EAF+L+D G+G I+V+ + D LRA D
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRDILRALD 125
Score = 34.3 bits (75), Expect = 0.086
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +2
Query: 371 SGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQSCRD 520
S D F + FDK+G G+I + ++ +L T+G+ + +++Q ++
Sbjct: 13 SADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKE 62
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCT--LHLKPDERISFEVFLPIYQAISKARSGDTANDFI-EGLRHF 415
+++LGQNPTE + + + L + ++ F F + + I K +T ++ I E + F
Sbjct: 55 MRALGQNPTEQQMMEIIHDVDLDGNGQVEFPEFCVMMKRIMK----ETDSEMIREAFKIF 110
Query: 416 DKDGNGFISSAELRHLLSTLGEKLSDDEVEQ 508
D+DGNG I++ E + + +G + EVE+
Sbjct: 111 DRDGNGVITANEFKLFMINMGMCFDEVEVEE 141
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +3
Query: 153 SEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
+E+++ EF+EAF LFD G+G I + ++G A+RA
Sbjct: 24 TEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRA 57
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +2
Query: 329 EVFLPIYQAISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQ 508
EVF IS+ + ++F E FDKDGNG IS EL + LG+ ++ ++ +
Sbjct: 11 EVFEESKLVISQLTE-EEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMME 69
Query: 509 SCRD 520
D
Sbjct: 70 IIHD 73
>U88165-10|AAK21395.1| 161|Caenorhabditis elegans Paralysed arrest
at two-fold protein10 protein.
Length = 161
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 317 RISFEVFLPIYQAISKARSGDTAN-DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSD 493
++ F+ F + ++ +T + E R FDK+GNG+IS L+ LL + + L+D
Sbjct: 70 KLEFDEFCALVYTVANTVDKETLEKELREAFRLFDKEGNGYISRPTLKALLKEIADDLTD 129
Query: 494 DEVEQS 511
++E++
Sbjct: 130 QQLEEA 135
>D45896-1|BAA82524.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 317 RISFEVFLPIYQAISKARSGDTAN-DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSD 493
++ F+ F + ++ +T + E R FDK+GNG+IS L+ LL + + L+D
Sbjct: 70 KLEFDEFCALVYTVANTVDKETLEKELREAFRLFDKEGNGYISRPTLKALLKEIADDLTD 129
Query: 494 DEVEQS 511
++E++
Sbjct: 130 QQLEEA 135
>D45895-1|BAA82523.1| 161|Caenorhabditis elegans troponin C
protein.
Length = 161
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 317 RISFEVFLPIYQAISKARSGDTAN-DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSD 493
++ F+ F + ++ +T + E R FDK+GNG+IS L+ LL + + L+D
Sbjct: 70 KLEFDEFCALVYTVANTVDKETLEKELREAFRLFDKEGNGYISRPTLKALLKEIADDLTD 129
Query: 494 DEVEQS 511
++E++
Sbjct: 130 QQLEEA 135
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +2
Query: 236 RRCVKSLGQNPTESDVKKC--TLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLR 409
R ++ +GQ+PTE ++ D I F+ FL I A++ +
Sbjct: 44 RAVMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFLVI------AKANPLSLSLKAVFE 97
Query: 410 HFDKDGNGFISSAELRHLLSTLGEKLSDDEVE 505
D DG+G+I+ +ELR +G LSD +++
Sbjct: 98 ELDVDGDGYITRSELRTAFQRMGHSLSDQDIK 129
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +2
Query: 374 GDTANDFIEGL-RHFDKDGNGFISSAELRHLLSTLGEKLSDDEVE 505
G+ D ++G+ R FD +G+G+I ELR ++ +G+ ++DE++
Sbjct: 16 GEIREDDLKGIFREFDLNGDGYIQREELRAVMQKMGQSPTEDELD 60
>AC024205-5|ABA00164.1| 97|Caenorhabditis elegans Hypothetical
protein Y73C8B.5 protein.
Length = 97
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 389 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQSCR 517
+F + + FD+DGNGFIS AEL L S +LS + + ++ R
Sbjct: 29 NFKKVFQEFDEDGNGFISVAELEPLFSNFQARLSAEGIRKTFR 71
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +2
Query: 380 TANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQSCR 517
T + + + DKDG+GFIS AEL+ +++ L L+++E++ R
Sbjct: 277 TEEEIRKVFQDLDKDGDGFISVAELQAVMTNLQAWLTEEEIDDGIR 322
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 35.9 bits (79), Expect = 0.028
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 135 HNMAGYSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALR 251
H + GYSE++L E+++ F +FD+ G I + ++ A++
Sbjct: 45 HLLEGYSEEELQEYRQVFNMFDADRSGAIAIDELEAAIK 83
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +2
Query: 245 VKSLGQNPTESDVKKCT--LHLKPDERISFEVFLPIYQAISKARSGDTANDFI-EGLRHF 415
+K+LG T ++ K + + + +I F+ F + + ++ +S N+ + E F
Sbjct: 82 IKNLGLEQTRDELDKIIDEVDQRGNHQIDFDEFCVVMRRLTMKKSN--WNEVVKECFTVF 139
Query: 416 DKDGNGFISSAELRHLLSTLGEKLSDDEV 502
D+ NG IS + R +L LG+ ++D+++
Sbjct: 140 DRSENGGISKKDFRFILRELGD-ITDNQI 167
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 35.1 bits (77), Expect = 0.049
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 398 EGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVE 505
E R FDK+G+G I+ EL L LGEK S+ ++E
Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSKIE 46
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 413 FDKDGNGFISSAELRHLLSTLGEKLSDDEVEQ 508
FDK+G+G IS +L ++ LGEKL++ E ++
Sbjct: 89 FDKNGDGVISIDDLIFVMCQLGEKLTETEAKE 120
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 108 HYLQFHL*IHNMAGYSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
H L+ + N +G SE+ L EF F+ FD G++ Q LRA
Sbjct: 2260 HNLEQQIQARNQSGVSEEALREFSMMFKHFDKEKTGRLDHQQFKSCLRA 2308
>AC006676-5|AAK71383.2| 172|Caenorhabditis elegans Hypothetical
protein M04F3.4 protein.
Length = 172
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 386 NDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLS 490
ND+ R FD DG+G I +EL + L+ G +LS
Sbjct: 73 NDWTNCFRGFDTDGSGNIDKSELTNALTQFGYRLS 107
>Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical
protein F55C10.1 protein.
Length = 171
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 311 DERISFEV-FLPIYQAISK-ARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTL-GE 481
DE + EV F Q IS+ + GD R +D D +GFIS+ EL +L + G
Sbjct: 63 DEDGNGEVDFREFIQGISQFSVKGDKNTKLKFAFRIYDMDRDGFISNGELFQVLKMMVGN 122
Query: 482 KLSDDEVEQ 508
L D +++Q
Sbjct: 123 NLKDSQLQQ 131
>AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein.
Length = 171
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 311 DERISFEV-FLPIYQAISK-ARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTL-GE 481
DE + EV F Q IS+ + GD R +D D +GFIS+ EL +L + G
Sbjct: 63 DEDGNGEVDFREFIQGISQFSVKGDKNTKLKFAFRIYDMDRDGFISNGELFQVLKMMVGN 122
Query: 482 KLSDDEVEQ 508
L D +++Q
Sbjct: 123 NLKDSQLQQ 131
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 31.5 bits (68), Expect = 0.60
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 239 RCVKSLGQNPTESDVKKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDFIEGLRH 412
+ ++ GQ PT+ +++ H D+ I+F+ F + + T + E
Sbjct: 152 KAMQKCGQKPTKLELRLIMYHGDNDQNGVITFDEFAHLMNGTASMNQY-TYDQLREQFDM 210
Query: 413 FDKDGNGFISSAELRHLLSTLGEKLS 490
FDKD +GFI E+ ++ L + S
Sbjct: 211 FDKDKDGFIEKMEMLSIVRELSLQAS 236
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 144 AGYSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALR 251
A ++++ E++ AF FD+ DG+I + ++ A++
Sbjct: 120 ASNCKNKIEEYKRAFNFFDANNDGRITIDELEKAMQ 155
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 31.5 bits (68), Expect = 0.60
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 395 IEGLRHFDKDGNGFISSAELRHLLSTL-GEKLSD 493
I+ + +DK+GNG ISS + + +++T+ G L+D
Sbjct: 204 IQAFKRYDKNGNGTISSLDFQQIMTTVKGHLLTD 237
>U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light
chain protein 3, isoformb protein.
Length = 90
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 141 MAGYSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDALRA 254
MA S+D L +E F L+D DGKI Q+GD RA
Sbjct: 1 MAPPSQDVL---KEIFNLYDEELDGKIDGTQVGDVARA 35
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 248 KSLGQNPTESDVKKCT---LHLKPDERISFEVFLPIYQAISKAR 370
++ G PT++ V K K ++R++FE +LP+Y+ ++K +
Sbjct: 34 RAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQLAKEK 77
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 444 EEMNPLPSLSKWRRPSIKSLAVSPL 370
E MN L S ++W R IKSL+ PL
Sbjct: 690 ENMNELNSQNEWIRAKIKSLSAEPL 714
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +2
Query: 257 GQNPTESDVKKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRHFDKDGNGF 436
G +PT+ KK + LK ER F YQ + SGD +D LRHF + G+
Sbjct: 207 GVDPTKEQWKKLSQVLK--ERKILPFFDMAYQGFA---SGDVDDDAF-ALRHFIEQGHNV 260
Query: 437 ISSAELRHLLSTLGEKL 487
+ + + GE++
Sbjct: 261 LVAQSFAKNMGLYGERV 277
>L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical
protein C50C3.5 protein.
Length = 202
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 416 DKDGNGFISSAELRHLLSTLGEKLSDDEVEQSCR 517
D DG+G ISS+E+ +L+ LG +S V+ R
Sbjct: 60 DDDGSGTISSSEVAKMLNELGIDVSPKVVQAVMR 93
>U80027-18|AAC48115.1| 198|Caenorhabditis elegans Hypothetical
protein T28A11.3 protein.
Length = 198
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 212 WKDTCRSDRRCVKSLGQNPTESDVKKCTL 298
+KDTC S R C+ +L +P D K+ L
Sbjct: 65 FKDTCDSLRSCLANLKCSPVPKDQKEAAL 93
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 150 YSEDQLAEFQEAFQLFDSRGDGKIHVAQIGDAL 248
Y+ +L E+++ F +FD+ G G I ++ A+
Sbjct: 45 YTRKELKEYRQLFNMFDTDGSGAIGNEELKQAM 77
>AF047655-8|AAC04397.1| 227|Caenorhabditis elegans Hypothetical
protein C17B7.3 protein.
Length = 227
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 212 WKDTCRSDRRCVKSLGQNPTESDVKKCTL 298
+KDTC S R C+ +L +P D K+ L
Sbjct: 94 FKDTCDSLRSCLANLKCSPVPKDQKEAAL 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,033,231
Number of Sequences: 27780
Number of extensions: 308808
Number of successful extensions: 1000
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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