Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20635
         (781 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.90 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.90 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.90 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.90 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -2

Query: 396 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 268
           FA  F  I   F C    Q    GFSY F  N  + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -2

Query: 396 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 268
           FA  F  I   F C    Q    GFSY F  N  + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -2

Query: 396 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 268
           FA  F  I   F C    Q    GFSY F  N  + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -2

Query: 396 FAHNFLIIHVSFGCDFATQKHHTGFSYGFTCNFCVRILIQVRV 268
           FA  F  I   F C    Q    GFSY F  N  + + I + +
Sbjct: 386 FASYFAYIFGKFACKIMIQ----GFSYAFPVNLTIPVSISLLI 424


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 462  HHTACLVIKAFGRIIITNMFDRFAHNFLII 373
            HH    +IK+F  I    +   F  NFLII
Sbjct: 1308 HHHLSKLIKSFNEIYGVPLLLFFGLNFLII 1337


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 566 CITEHQALVSCPNFLVIS 513
           C+   Q L  CPN LV +
Sbjct: 48  CVNGQQELYDCPNGLVFA 65


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 199 QKY*SIFHIITVSVGFRVSIHF*SLRHSEFRV 104
           QK+ ++   + +S+G  VSI+  S   +E  +
Sbjct: 32  QKFYAVAFFLALSIGVVVSIYSKSFHRNEIHI 63


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 324 FSYGFTCNFCVRILIQ 277
           + Y  TC FC+ +L +
Sbjct: 497 YLYRMTCLFCINVLAE 512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,490
Number of Sequences: 336
Number of extensions: 4947
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)