Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20635
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 149 3e-36
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 149 3e-36
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 149 3e-36
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 139 2e-33
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 105 3e-23
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 102 2e-22
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 102 2e-22
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 71 7e-13
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 71 7e-13
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 32 0.40
Z81472-3|CAB03888.2| 468|Caenorhabditis elegans Hypothetical pr... 32 0.53
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 30 1.6
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 29 4.9
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 6.5
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 8.6
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 8.6
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 149 bits (360), Expect = 3e-36
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +1
Query: 253 NDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSK 432
+DA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA VDYQ +VR +K IGYDDSSK
Sbjct: 26 SDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSK 85
Query: 433 GFDYKTCSVMLALDQQSPNIAAGVH 507
GFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 86 GFDYKTCNVLVALEQQSPEIAAGVH 110
Score = 68.1 bits (159), Expect = 7e-12
Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 2/46 (4%)
Frame = +3
Query: 525 EVGAGDQGLMFGYATDETEECMPLTVVLXHKLNQ--XNCRASGEME 656
+VGAGDQG+MFGYATDETEE MPLT++L HKLN R SGE+E
Sbjct: 117 DVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELE 162
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 194 FLFTSESVGEGHPDKMCDQ 250
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2
Query: 629 KLQSFRRNGEFWWARPDSKTQVXCEY 706
KL RR+GE W RPDSKTQV EY
Sbjct: 151 KLHELRRSGELEWVRPDSKTQVTIEY 176
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 149 bits (360), Expect = 3e-36
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +1
Query: 253 NDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSK 432
+DA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA VDYQ +VR +K IGYDDSSK
Sbjct: 26 SDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSK 85
Query: 433 GFDYKTCSVMLALDQQSPNIAAGVH 507
GFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 86 GFDYKTCNVLVALEQQSPEIAAGVH 110
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/51 (62%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
Frame = +3
Query: 510 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLXHKLNQ--XNCRASGEME 656
+++ ++VGAGDQG+MFGYATDETEE MPLT++L HKLN+ R SGE+E
Sbjct: 112 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 162
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 194 FLFTSESVGEGHPDKMCDQ 250
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2
Query: 629 KLQSFRRNGEFWWARPDSKTQVXCEY 706
KL RR+GE W RPDSKTQV EY
Sbjct: 151 KLHELRRSGELEWVRPDSKTQVTIEY 176
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 149 bits (360), Expect = 3e-36
Identities = 66/85 (77%), Positives = 77/85 (90%)
Frame = +1
Query: 253 NDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSK 432
+DA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA VDYQ +VR +K IGYDDSSK
Sbjct: 26 SDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSK 85
Query: 433 GFDYKTCSVMLALDQQSPNIAAGVH 507
GFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 86 GFDYKTCNVLVALEQQSPEIAAGVH 110
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/51 (62%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
Frame = +3
Query: 510 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLXHKLNQ--XNCRASGEME 656
+++ ++VGAGDQG+MFGYATDETEE MPLT++L HKLN+ R SGE+E
Sbjct: 112 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 162
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 194 FLFTSESVGEGHPDKMCDQ 250
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2
Query: 629 KLQSFRRNGEFWWARPDSKTQVXCEY 706
KL RR+GE W RPDSKTQV EY
Sbjct: 151 KLHELRRSGELEWVRPDSKTQVTIEY 176
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 139 bits (337), Expect = 2e-33
Identities = 62/85 (72%), Positives = 76/85 (89%)
Frame = +1
Query: 253 NDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSK 432
+DA+LDAHL QDP+AKVACET+TKTGMV+LCGEITSKA VDYQ +VR ++ IG+ DSS
Sbjct: 25 SDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSI 84
Query: 433 GFDYKTCSVMLALDQQSPNIAAGVH 507
GFD+KTC+V++AL+QQSP IAAGVH
Sbjct: 85 GFDHKTCNVLVALEQQSPEIAAGVH 109
Score = 68.9 bits (161), Expect = 4e-12
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +3
Query: 510 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLXHKLN 623
N++ E+VGAGDQG+MFGYATDETEE MPLT++L HK+N
Sbjct: 111 NKDGEDVGAGDQGIMFGYATDETEETMPLTLILSHKIN 148
Score = 53.2 bits (122), Expect = 2e-07
Identities = 56/182 (30%), Positives = 70/182 (38%), Gaps = 9/182 (4%)
Frame = +2
Query: 188 SVFLFTSESVGEGHPDKMCDQXXXXXXXXXXXXXXXQKLHVKP*LKPVWCFCVAKS-HPK 364
S FLFTSESV EGHPDKMCDQ K V C V K+
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAK---------VACETVTKTGMVM 53
Query: 365 LTWIIKKLCAKRSNILVMMIRPKALITRHAV*CSH*TNNHQTLLLGCMEQK*RGSWGRRP 544
L I +LV + K T ++ H T N L + G +
Sbjct: 54 LCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKD 113
Query: 545 GLDVRLCNR*DRRMHAVDRSAXTQTQ--------SXKLQSFRRNGEFWWARPDSKTQVXC 700
G DV ++ +A D + T + +L RRNG W RPDSK+QV
Sbjct: 114 GEDVGAGDQGIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTI 173
Query: 701 EY 706
EY
Sbjct: 174 EY 175
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 105 bits (253), Expect = 3e-23
Identities = 47/61 (77%), Positives = 54/61 (88%)
Frame = +1
Query: 253 NDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSK 432
+DA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA VDYQ +VR +K IGYDDSSK
Sbjct: 26 SDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSK 85
Query: 433 G 435
G
Sbjct: 86 G 86
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 194 FLFTSESVGEGHPDKMCDQ 250
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 102 bits (245), Expect = 2e-22
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +1
Query: 331 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 507
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVH 59
Score = 68.1 bits (159), Expect = 7e-12
Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 2/46 (4%)
Frame = +3
Query: 525 EVGAGDQGLMFGYATDETEECMPLTVVLXHKLNQ--XNCRASGEME 656
+VGAGDQG+MFGYATDETEE MPLT++L HKLN R SGE+E
Sbjct: 66 DVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELE 111
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2
Query: 629 KLQSFRRNGEFWWARPDSKTQVXCEY 706
KL RR+GE W RPDSKTQV EY
Sbjct: 100 KLHELRRSGELEWVRPDSKTQVTIEY 125
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 102 bits (245), Expect = 2e-22
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +1
Query: 331 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 507
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVH 59
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/51 (62%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
Frame = +3
Query: 510 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLXHKLNQ--XNCRASGEME 656
+++ ++VGAGDQG+MFGYATDETEE MPLT++L HKLN+ R SGE+E
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 111
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2
Query: 629 KLQSFRRNGEFWWARPDSKTQVXCEY 706
KL RR+GE W RPDSKTQV EY
Sbjct: 100 KLHELRRSGELEWVRPDSKTQVTIEY 125
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/51 (62%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
Frame = +3
Query: 510 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLXHKLNQ--XNCRASGEME 656
+++ ++VGAGDQG+MFGYATDETEE MPLT++L HKLN+ R SGE+E
Sbjct: 71 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 121
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/37 (62%), Positives = 29/37 (78%), Gaps = 3/37 (8%)
Frame = +1
Query: 406 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVH 507
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVH 69
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 194 FLFTSESVGEGHPDKMCDQ 250
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2
Query: 629 KLQSFRRNGEFWWARPDSKTQVXCEY 706
KL RR+GE W RPDSKTQV EY
Sbjct: 110 KLHELRRSGELEWVRPDSKTQVTIEY 135
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +1
Query: 253 NDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSK 432
+DA+LDAHL QDP AKVAC KT VL+ E S V +++ +G D
Sbjct: 26 SDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDS-DDVGAGDQGI 84
Query: 433 GFDYKT 450
F Y T
Sbjct: 85 MFGYAT 90
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/51 (62%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
Frame = +3
Query: 510 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLXHKLNQ--XNCRASGEME 656
+++ ++VGAGDQG+MFGYATDETEE MPLT++L HKLN+ R SGE+E
Sbjct: 53 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELE 103
Score = 54.8 bits (126), Expect = 7e-08
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +1
Query: 412 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVH 507
GY D GFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVH 51
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2
Query: 629 KLQSFRRNGEFWWARPDSKTQVXCEY 706
KL RR+GE W RPDSKTQV EY
Sbjct: 92 KLHELRRSGELEWVRPDSKTQVTIEY 117
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 194 FLFTSESVGEGHPDKMCDQ 250
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 253 NDAILDAHLNQDPDAKVAC 309
+DA+LDAHL QDP AKVAC
Sbjct: 26 SDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 194 FLFTSESVGEGHPDKMCDQ 250
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 259 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 399
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 259 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 399
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 259 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 399
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z81472-3|CAB03888.2| 468|Caenorhabditis elegans Hypothetical
protein C16D6.2 protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 578 CLICCITEHQALVSCPNFLVISVPCTPAAMFGDCWSSASIT 456
C+I IT +++L + PN ++S+ C+ + C +SA+IT
Sbjct: 47 CVILAITRNKSLQTVPNLFILSLSCSDIVV---CCTSATIT 84
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 24 AARSRTSGSPGLQEFGTRTVWGYISGLTLN-SECRRLQK*MDTRKPTDT 167
AAR+R S S GL E + + + + +ECRRLQK ++ RK + T
Sbjct: 529 AARARASDSSGLTEIEQQRSEERLELIDEHLTECRRLQKLLELRKTSKT 577
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 441 LQDMQCDARTRPTITKHCCWGAWNRNDEEVGA 536
L+D+ CD + RPT ++C + +E +G+
Sbjct: 1461 LKDVDCDVQKRPTSARNCRLEPCPKGEEHIGS 1492
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 441 LQDMQCDARTRPTITKHCCWGAWNRNDEEVGA 536
L+D+ CD + RPT ++C + +E +G+
Sbjct: 1461 LKDVDCDVQKRPTSARNCRLEPCPKGEEHIGS 1492
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 313 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 492
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 493 AAGV 504
+
Sbjct: 97 PISI 100
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 359 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 451
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 432 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 310
FGR D NF H FG HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 432 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 310
FGR D NF H FG HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,277,730
Number of Sequences: 27780
Number of extensions: 458473
Number of successful extensions: 1212
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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