Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20634
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071239-1|AAL48861.1|   64|Drosophila melanogaster RE27904p pro...   108   8e-24
AE014296-593|AAN11541.1|   64|Drosophila melanogaster CG32276-PB...   108   8e-24
AE014296-592|AAN11540.1|   64|Drosophila melanogaster CG32276-PA...   108   8e-24
BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p pro...    30   2.5  
AY060725-1|AAL28273.1|  515|Drosophila melanogaster GH17414p pro...    30   2.5  
AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-P...    30   2.5  

>AY071239-1|AAL48861.1|   64|Drosophila melanogaster RE27904p
           protein.
          Length = 64

 Score =  108 bits (259), Expect = 8e-24
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = +2

Query: 62  MAHKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 241
           MA  QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QS
Sbjct: 1   MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQS 60

Query: 242 IRLA 253
           IR A
Sbjct: 61  IRAA 64


>AE014296-593|AAN11541.1|   64|Drosophila melanogaster CG32276-PB,
           isoform B protein.
          Length = 64

 Score =  108 bits (259), Expect = 8e-24
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = +2

Query: 62  MAHKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 241
           MA  QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QS
Sbjct: 1   MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQS 60

Query: 242 IRLA 253
           IR A
Sbjct: 61  IRAA 64


>AE014296-592|AAN11540.1|   64|Drosophila melanogaster CG32276-PA,
           isoform A protein.
          Length = 64

 Score =  108 bits (259), Expect = 8e-24
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = +2

Query: 62  MAHKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 241
           MA  QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QS
Sbjct: 1   MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQS 60

Query: 242 IRLA 253
           IR A
Sbjct: 61  IRAA 64


>BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p
           protein.
          Length = 1040

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 101 ASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQ-SIRLA*SRRQLEN 277
           A+K  T  G  PK  ++ E  +    WL+ +F+F +    +  II  + R     RQLE+
Sbjct: 652 ATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLED 711


>AY060725-1|AAL28273.1|  515|Drosophila melanogaster GH17414p
           protein.
          Length = 515

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 101 ASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQ-SIRLA*SRRQLEN 277
           A+K  T  G  PK  ++ E  +    WL+ +F+F +    +  II  + R     RQLE+
Sbjct: 127 ATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLED 186


>AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-PA
           protein.
          Length = 1040

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 101 ASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQ-SIRLA*SRRQLEN 277
           A+K  T  G  PK  ++ E  +    WL+ +F+F +    +  II  + R     RQLE+
Sbjct: 652 ATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLED 711


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,620,238
Number of Sequences: 53049
Number of extensions: 579700
Number of successful extensions: 1430
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)